Dipodomys spectabilis (banner-tailed kangaroo rat): 122096512
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Entry
122096512 CDS
T07891
Symbol
Thoc3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122096512 (Thoc3)
09122 Translation
03013 Nucleocytoplasmic transport
122096512 (Thoc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122096512 (Thoc3)
03041 Spliceosome [BR:
dsp03041
]
122096512 (Thoc3)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122096512 (Thoc3)
Spliceosome [BR:
dsp03041
]
Complex C
Other components
EJC/TREX
122096512 (Thoc3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122096512 (Thoc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_Vps41
DSE1_N
eIF2A
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
NBCH_WD40
RMC1_N
WDR90_beta-prop_4th
Tricorn_2nd
PD40
Beta-prop_ACSF4
TRM82_WD
B-prop_COPA_B_2nd
PAC11
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
ASA1
Beta-prop_WDR41
Cytochrom_D1
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Peptidase_S9_N
DPPIV_N
Beta-prop_ELP1_1st
Beta-prop_WDR11_1st
TP_0598_N
PROPPIN
WD_LRWD1
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
122096512
NCBI-ProteinID:
XP_042523017
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MAAPAAAAGPSALGPSGPGSLAAWSAVSGGPSRYVLGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG
DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPTGRYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggcggcggccgcggggccctcggcgctgggcccgagcggccccggctcg
ctggccgcctggagcgcggtgagcggcggcccgtcgcgctacgtgctgggcatgcaggag
ctgttccgcggccacagcaagacgcgcgagttccccgcgcacagcgccaaggtgcactcg
gtggcctggagctgcgacggccgccgcctggcctcgggctccttcgacaagacggccagc
gtcttcctgctggagaaggaccggctggtcaaagagaacaactaccggggccatggcgac
agtgtggaccagctctgctggcatcccagtaatcccgacctgttcgtcactgcctctggc
gataaaaccattcgcatctgggatgtgaggaccacaaaatgcattgccaccgtgaacaca
aaaggggaaaacattaacatctgttggagtcccgacgggcagaccatcgccgtgggtaac
aaggacgacgtggtcactttcatcgacgccaagacgcaccgctccaaagcagaggagcag
ttcaagttcgaggtgaacgagatctcttggaataatgacaacaacatgttcttcctgacc
aacggcaacggctgtatcaacatcctcagctacccggagctgaagccggtgcagtccatc
aacgcccacccttccaactgcatctgcatcaagttcgaccccacggggcggtacttcgcc
acaggcagcgcggacgccctggtgagcctctgggacgtggacgagctggtgtgcgtgcgc
tgcttctccaggctggactggcccgtgaggaccctgagtttcagccacgatgggaagatg
ctggcatcggcgtccgaggaccatttcatcgacatagccgaggtcgagacgggggacaag
ctctgggaggtgcagtgtgagtccccaaccttcaccgtggcctggcaccccaaaaggccc
ctgctggcgtttgcctgcgacgacaaagatggcaagtacgacagcagccgggaggccggg
acggtgaagctgttcgggctccctaatgactcctga
DBGET
integrated database retrieval system
