Dipodomys spectabilis (banner-tailed kangaroo rat): 122096529
Help
Entry
122096529 CDS
T07891
Symbol
Ddx41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
122096529 (Ddx41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsp03041
]
122096529 (Ddx41)
Enzymes [BR:
dsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122096529 (Ddx41)
Spliceosome [BR:
dsp03041
]
Complex C
Other components
Complex C specific factors
122096529 (Ddx41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
122096529
NCBI-ProteinID:
XP_042523046
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MRAPRMEESEPERKRARPDEATAGGSRSEDEDGEDEEYVPYVPLRQRRQLLLQKLLQRRR
KGAAEEEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEK
ILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLNMSEERHERVRKKYHILVEGDG
IPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVF
TLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCA
LCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFE
GDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV
KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI
EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTF
INKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDC
PKLEAMQTKQVSNIGRKDYLAHSSMDF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgccaaggatggaggagtcggaacccgagcggaagcgggcccgccctgacgag
gcgactgccggagggagtcgctccgaggatgaggacggggaggacgaagaatacgtgccg
tatgtgccgctgcgacagcgccggcagctcctgcttcagaagctgctgcagcgcagacgc
aaaggagccgcggaggaggagcagcaggacagcggcagcgagccccggggggatgaagac
gacatccccctgggccctcagtccaacgtcagcctcttggatcagcaccagcacctcaaa
gagaaggctgaagcccgcaaggagtctgcaaaggagaaacagctcaaggaagaagagaag
attctggagagtgtagcggaaggacgagccttgatgtcagtgaaggagatggccaagggc
atcacgtacgatgaccccatcaaaaccagttggactccaccccgttacgtcctgaacatg
tctgaagagaggcatgaacgagtacggaagaagtatcacatcctggtggagggagatggc
atcccaccacccatcaagagcttcaaggaaatgaagtttcccgcagcaatccttcgaggc
ctgaagaagaaaggcatccttcacccaacacccattcagatccagggcatacccaccatt
ctgtctggccgggacatgattggtattgctttcaccgggtcaggcaagactctggtgttt
accctgcctgtcatcatgttttgcctggagcaagagaagcggttgcctttctccaagcgt
gaagggccctacggactcatcatttgcccctcgcgggagctggcccggcagacgcacggc
atcctggagtattactgtcgcctgctgcaagaggacagctccccgctcctgcgctgtgcc
ctctgcattggaggcatgtctgtcaaagagcaaatggagaccatccgacacggcgtgcac
atgatggtggccacccctgggcgcctcatggatttgctacagaagaaaatggtcagcctg
gacatctgtcgctacctggccctggatgaggccgaccgcatgattgatatgggcttcgag
ggggacatccgcaccatcttctcctacttcaagggccagcgacagactctactcttcagt
gccaccatgcccaagaagattcagaacttcgccaagagtgccctggtaaaacctgtcacc
attaatgtggggcgcgccggggccgccagcctcgatgtcatccaggaggtggaatacgtg
aaggaagaggccaagatggtgtacctgctggagtgcctgcagaagacccccccgccggtg
ctcatctttgcggagaagaaagcagatgtggatgcgatccacgaatacctgctgctcaag
ggggtcgaggccgtggccatccacgggggcaaagaccaggaggaacggaccaaagccatc
gaggccttccgagagggcaagaaagacgtcctagtggccaccgatgtggcttccaagggc
ctggatttccctgccatccagcacgtcattaattacgacatgcctgaggaaatcgagaac
tacgtgcaccggatcggccgcaccgggcgctctggaaacacaggcatcgccaccacgttc
atcaacaaggcctgcgatgagtcggtgctcatggacctcaaggccttgctgctggaagcc
aagcagaaggtgccgcccgtgctgcaagtcctgcactgtggggacgagtccatgctagac
attggaggagagcgtggctgtgccttctgcggggggctgggccatcgcatcaccgactgc
cccaagctggaagccatgcagaccaagcaggtcagcaacatcggccgcaaggactacctg
gcccacagctccatggacttctag
DBGET
integrated database retrieval system
