Dipodomys spectabilis (banner-tailed kangaroo rat): 122096667
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Entry
122096667 CDS
T07891
Symbol
Pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03030
DNA replication
dsp03410
Base excision repair
dsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122096667 (Pole)
03410 Base excision repair
122096667 (Pole)
03420 Nucleotide excision repair
122096667 (Pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsp03032
]
122096667 (Pole)
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122096667 (Pole)
Enzymes [BR:
dsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122096667 (Pole)
DNA replication proteins [BR:
dsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
122096667 (Pole)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
122096667 (Pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
GARP
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
122096667
NCBI-ProteinID:
XP_042523182
LinkDB
All DBs
Position
Unknown
AA seq
2284 aa
AA seq
DB search
MVLRNSARRRAEPDGDGEASRDDGPSSSASVLKRLERSQWTDKMDSRFGFERLKEPGEKT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALTYKPYFYIATRKGCEREVSSFL
SKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIRLSFHTVEDLVKVRKEISPAVRKNREQ
DHASNAYTAMLSSVLQGGSVITDEEETSKKTTDQLENIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRYRGTAFPVEMTRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMV
TYNGDFFDWPFVEARAAVHGLSMYQEIGFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTEDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPVEQATNFDEVC
EQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPALFPDGPTRAFHELSREEQAKYEK
RRLADYCRKAYKKVHVTKVEERFTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEAGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELVEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNTKKPKVTISYPGAMLNIM
VKEGFTNDQYQELAEPSSLTYITRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVRNPVPRVKHPDWLHRKLLEKNDVYKQKKISDLFVLEGRRQIVTAQI
PEGSPRPTAPDMEDFGLTKQIHSAIPVATKRKRVLWESQQDSQDLELTVPWKEILGQPPI
LGTTQEEWLVWLGFHKKKWQLQAQQRVVRRKRQRLELTEGSLRPGTVREGPVTGLGSFLR
KTARSILDLPWQIVQISETNQAGLFRLWAIIGSDLHCIKLSIPRVFYVNQRVAKVEEGPS
YRKVNRALPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQ
LGCVCVVNKQLVRHLSGWEAETFALEHLEMRSLAQFSYLEPGSIRHIYLYHHAQGHKALF
GIFIPSQRRASVFVLDTVRSNQMPSLSALYSAEHSQLLEKMGPELLPPPKHTFEVRAETN
LKTICRAIQRFLLAYKEERRGPTLIAVHSNWELRRLASEVPVLEEFPLVPVRVAEKISYG
VLDWQRHGARRMIQHYLNLDTCLSQAFEMSRYFHIPIGNLPEDISTFGSDLFFARHLQRH
NHLLWLSPTSRPDLGGKEADDSRLVMEFDDRATVEINNSGCYSTVCVELDIQNLAVNTIL
QSHHINDMEGAGSMGISFDVIQQASLEDMVTGNQASSAPASYDETALCSSAFRILKSMVV
GWVKEITQYHNIYADNQVMHFYRWLRSPCSLLHDPALHRTLHGMMKKLFLQLVAEFKRLG
SSVIYANFNRIILCTKKRRTEDAIAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPS
NYGGIKGKVPSSIHCGQQDSQAGEGAEDKQEDEEEDEEEEEEEGVEESEVEDLLESNWNI
LQFLPQAASCQSYFLMIISAYIVAVYHSMKDELRRSAPGSTPVKRRGASQFSQEPEVAAG
ALPGMITFSQDYVANELTHSFFTITQKIQKKITGSRNSTEPSEMFPVLPGSHLLLNNPAL
EFVKYVCKVLSLDTNITNQVNKLSRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVICHSCN
FCRDLDLCKDASFSQDGTVLPQWFCSNCQAAYDSAAIESALVEALQRKLMAFTLQDLICL
KCRGVKETHMPEYCSCAGDFALTIHTQIFMEQIGIFQNIAQHYGMLYLQETLEWLLQTGP
LSNS
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgaggaacagcgcgcggcggcgcgcggagccggacggcgacggcgaggccagc
cgggatgatggcccctcttcctcagcatctgtgctcaagcgcctggagaggagccagtgg
acagataagatggactcgaggtttggttttgagaggctgaaggagcctggtgaaaagact
ggctggcttatcaatatgcaccctacggagattttagatgaagataaacgcttagtcagt
gcagtggattactactttattcaagatgatgggagcagatttaaggtggccttgacctat
aagccatatttctacattgcaactagaaagggttgtgagcgagaagtttcatcttttctc
tccaagaagtttcagggtaaaattgccaaagtagaaactgttcccaaagaggacctggac
ctgccaaatcacttagtgggtttgaagcggaattacatcagattgtcttttcacactgtg
gaagaccttgtcaaagtgaggaaggagatttcccctgctgtgaggaagaaccgggagcag
gaccatgccagcaatgcgtatacagcaatgctgtccagtgttctgcaagggggtagtgta
attactgatgaagaagaaacctctaagaaaacaactgaccagttggaaaacatagtggac
atgagagagtatgacgttccctaccacatccgcctttccattgaccttaagatccacgtg
gctcactggtacaatgtcagataccggggaactgcctttccagtggaaatgactcggaga
gacgaccttgttgaacgacccgaccctgtggtattggcatttgacattgagacaactaaa
ctacccctcaagtttcctgatgctgagacagaccagattatgatgatctcctacatgatt
gatgggcagggctacctcatcactaacagggagattgtgtcagaagatattgaagacttc
gagttcacccctaagccagagtatgaagggcccttttgtgtcttcaatgagcctgatgag
gtccatctaatccagagatggtttgagcatgtccaggagaccaaacccaccatcatggtc
acctacaatggggacttttttgattggccatttgtggaagccagggcagcagttcacggc
ctgagcatgtaccaggagataggcttccagaaggacagccagggggagtacaaggcacca
cagtgcatccacatggactgcctcaggtgggtgaagagggacagctaccttccggtgggc
agtcataatctcaaggcagctgccaaggccaagcttggctatgaccctgtagaactggac
cctgaagacatgtgccggatggccacagagcagccccagactctggccacatattcagtg
tcagatgctgtcgccacttactatctatacatgaagtatgtccatcccttcatattcgcc
ctttgcaccattattcccatggaacctgatgaggtgcttcgaaaaggctctggcacacta
tgtgaggccttgctgatggtgcaggccttccatgccaacatcatcttccccaacaagcaa
gaacaggagttcaacaagctgacagaggatggccatgtactggatgctgagacctatgtt
gggggccatgtggaagctctggagtccggtgtctttcgcagtgacatcccctgtcggttt
aggatgaatcctgctgcctttgacttcctactgcagcgagttgaaaagaccatgcgtcat
gccattgaggaagaggagaaggtgccggtggagcaagccaccaactttgatgaggtgtgt
gaacaaattaagaccaagctcacttctctgaaggatgttcctaaccgaattgagtgtccc
cttatctaccacctggatgtgggggctatgtaccccaacattatccttacaaaccgccta
cagccctctgccatggtggatgaggccacctgtgcagcctgtgacttcaataagcctgga
gcaaactgccagaggaagatggcctggcagtggaggggcgagttcatgcctgctagtcgc
agtgaataccatcggatccaacaccaactggagtcagagaagttccctgccctgttccca
gatgggccaacccgggcctttcatgagctgtcccgtgaggaacaggctaagtatgaaaag
cggagactggcagattattgccggaaggcttacaagaaggtccatgtcaccaaggtggag
gagcgcttcactaccatctgccagcgggagaattccttctacgtggacacagtgcgggct
ttccgggacaggcgctatgagttcaaagggctacacaaggtgtggaaaaagaagctctcg
gcagcagtggaagcaggcgatgcagctgaggtgaagcgttgcaagaatatggagatcctg
tatgactcactgcagctagctcacaagtgcatcctgaactccttctatggctacgtcatg
cgcaagggggctcgctggtactccatggagatggctggcattgtctgcttcactggggcc
aacatcattacccaggcccgggagctggttgaacagattgggaggcccttagaactggac
acagatggaatatggtgtgttctgcccaatagctttccagaaaattttgttatcaagaca
accaacacaaagaagcccaaggtgaccatctcctaccctggagccatgttgaacatcatg
gtcaaggaaggcttcaccaatgaccagtaccaggaactggcagagccttcctcactcacc
tatatcacacgttcagagaacagcatcttttttgaggttgatggaccctatcttgccatg
atcctgccggcctccaaggaagaaggaaagaaattgaagaagagatacgctgtattcaat
gaggatggatccttggctgagctaaaaggctttgaggtcaaacgccgtggggagctgcag
ctaattaaaattttccagtcttctgtgtttgaggccttcctcaagggtagtactctagaa
gaggtgtatggctctgtagccaaggtggctgactactggctagacgtgctgtacagtaag
gcagctaacatgcctgattccgagctgtttgagctgatctcagaaaaccgctccatgtct
cggaagctagaagattatggggagcaaaagtccacatccatcagcacagcaaagcgcctg
gctgagtttcttggagaccagatggtcaaagatgcagggctgagctgtcgctatatcatc
tcccgcaaacccgagggctcccctgttactgagagagccatcccacttgccattttccaa
gcagagcccacagtgaggaaacacttccttcgaaaatggctaaagagctcgtcccttcaa
gattttgatatacggacgattctagactgggattactacattgaaagactggggagtgcc
atccagaagatcatcaccatccctgcagctctgcagcaggtgagaaacccagtaccgcgt
gtcaagcacccagactggctgcacagaaaactactggagaagaacgacgtctacaagcag
aagaaaatcagtgacctctttgtccttgagggcaggagacagattgtgacggcccaaatc
cctgaaggcagcccaaggccaactgctcctgacatggaggactttggtctcacaaaacaa
atccactcagcaattccagttgctactaagaggaagcgagttctttgggagagccaacag
gattctcaggaccttgagctgacagttccctggaaggagatcctgggtcagcctcctatc
ctcggaacaactcaggaagagtggctggtctggcttgggttccacaagaagaaatggcag
ctacaggcccagcaacgtgtggtccggaggaagagacagcgtctggaactgacagagggc
tcactaaggcctggaaccgtccgagaggggcctgtcacaggtttggggagcttcctaaga
aaaactgctcgcagcatcctggaccttccgtggcagattgtgcagatcagtgagaccaac
caggctggcctgttcagactatgggccatcatcggcagtgacttgcactgcatcaagctg
agcatccctcgagtattctacgtgaaccagagggtggccaaagtggaggagggaccttca
tatcgcaaggtaaatcgggctctccctcgttcgaacatggtctacaatctctatgagtat
tcagtaccggaagatatgtaccaagaacacatcaatgagatcaacacagaattgtccgca
ccagacatcgagggcgtgtatgagactcaggtcccattgttgttccgagctcttgtgcag
ctgggctgtgtgtgtgtggtcaacaaacagctggtaaggcacctttcaggctgggaagct
gaaacttttgcccttgaacacctggagatgcgttctctggctcaattcagctacctggaa
ccagggagtatccgccacatctacttgtaccaccacgcacagggccacaaagccctcttc
ggaatcttcatcccctcacagcgcagagcatctgtgtttgtgttggacactgtacgtagc
aaccagatgcccagcctcagtgctttgtactcagcagagcacagccagcttctagaaaag
atgggacctgaactcctgcctccccccaaacatacctttgaagttcgggctgaaaccaac
ctgaagaccatctgcagagccattcagcgcttcttgctggcctacaaggaggaacgccgg
gggcccacactcattgctgtccactccaactgggagctgcgaaggctggccagtgaggtc
cctgtcttggaggagttccccttagtgcctgtccgagtggccgaaaagatcagctacgga
gtcctggactggcagcgccatggagcccgccgcatgatccagcactacctcaaccttgac
acctgcctgtcacaggcctttgagatgagtaggtatttccacatccccattggaaatctg
ccagaagacatttccacctttggctctgacctcttctttgcacggcacctgcaacgccac
aaccacctgctctggctgtcccctacttcgcgtcctgacctgggagggaaggaggcagat
gacagccgccttgtcatggaatttgatgaccgagccactgtagagatcaacaattctggc
tgttactccactgtgtgtgtggagctggacatccaaaacctggcagtcaacaccatcctc
cagtctcaccacatcaatgatatggaaggggctggcagcatgggcatcagctttgacgtg
atccaacaggcctctctggaagacatggtcacaggaaatcaggcctccagtgctccagcc
agctacgatgagaccgccctctgctccagtgccttcaggatcctaaagagcatggtggtc
ggctgggtgaaggagatcacccagtaccacaacatctatgcagacaaccaggtgatgcac
ttctaccgctggctccggtctccatgctccctgctgcacgaccctgccctgcaccgaacg
ctgcacggcatgatgaagaagctcttcctgcagcttgttgctgaattcaagcgcctgggg
tcatcagtcatctatgccaattttaaccgcatcatcctttgtacaaagaagcgccggact
gaggacgccattgcctatgtagagtacattaccaatagcatccattctaaagagatcttc
cactccctgacgatttctttctcccgatgctgggaatttcttctctggatggatccatct
aactatggtggaatcaaagggaaagttccgagtagtattcactgtggacagcaagactcc
caggctggggaaggagctgaggataagcaggaggatgaggaggaagacgaagaggaagag
gaagaggagggggtggaggaatccgaggtggaagacttactggaaagcaactggaatatt
ttgcagtttttgccacaggcagcgtcctgccaaagttacttcctcatgatcatctcagca
tatattgtggctgtgtaccacagcatgaaggatgagctgaggcgtagtgccccaggcagc
acccctgtgaagaggaggggggccagccaattctcccaggagcccgaggtggcagcagga
gcccttcctggaatgatcactttctctcaagattatgtggcaaacgagctcactcacagc
ttcttcaccatcactcagaagattcaaaagaaaatcaccggctctcggaactcaactgag
ccctcagagatgtttcctgtcctgcctggttcacacttgctgctcaataaccctgctctg
gagttcgtcaaatatgtctgcaaggtactgtctttggacacaaacatcacaaaccaggtg
aacaagctgagcagagacttgcttcgcttggtggacgttggcgagttctctgaggaagcg
cagttcagagacccttgccgctcctacgtgctcccggaggtgatctgccacagctgtaat
ttctgccgagacctggacctgtgcaaagacgcctccttctctcaggatggaaccgttctt
cctcagtggttctgctccaactgtcaggctgcctacgactcagctgccattgagtcagct
ctggtagaagctctgcagaggaagctgatggccttcactctgcaggaccttatctgcctg
aagtgtcgtggtgtgaaggagacccatatgcctgagtactgcagctgtgcaggggacttc
gccctcaccatccacactcagatcttcatggaacaaattggaatcttccagaacattgcc
cagcactatggcatgttatacctccaggagaccctggagtggctactgcagacaggtcct
ctgtccaactcttag
DBGET
integrated database retrieval system
