Dipodomys spectabilis (banner-tailed kangaroo rat): 122096746
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Entry
122096746 CDS
T07891
Symbol
Hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03015
mRNA surveillance pathway
dsp05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122096746 (Hbs1l)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
122096746 (Hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122096746 (Hbs1l)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122096746 (Hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
GIP1_N
AAA_22
DO-GTPase2
AMG1_III
Motif
Other DBs
NCBI-GeneID:
122096746
NCBI-ProteinID:
XP_042523513
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPVDYDYEELKDSP
NSHLNHQLSEIDQARLYSCLDHMREVLGDAVSDEILIEAILKNKFDVQKALSMVLEQDNV
QKLKDKSEKAVATGKIAKGKSVGSQSSRSESEIVPKVAKMTVSGKKQTMGFEVPGENGHG
LHTPQKGPPGEDNSIISSDSLDTVSKSALPPHSIQVSEEQSATPTSVKKSGKLKQQIDVK
VELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFA
YAWVLDETGEERERGVTMDVGMTKFETATKVITLMDAPGHKDFIPNMITGAAQADVAVLV
VDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGQF
LKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFRPPQRSIDKPF
RLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGD
HVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEVPITKGFPVLLHYQTVS
EPAVIKRLISVLSKSTGEVMKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLR
YSGSTIAAGVVTEIKE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcccgacatcgcaatgtccggggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttctccatcaacagcggctcagttt
atttactcacgacgtgacaaacctgtggactatgattatgaagaactgaaagactctccc
aattctcatttgaaccaccagctaagtgaaattgaccaagctcgtctttattcatgcctt
gatcacatgagagaggtactgggagatgctgtgtcagatgaaatactgattgaagcaatt
ttgaagaacaagtttgatgtgcagaaggccttgtccatggttctggaacaagataatgta
cagaagttgaaggacaagagtgaaaaagcagtagccacagggaagatagcaaaaggaaaa
tcagtaggatctcagtcatctcgaagtgaatctgaaattgtgccaaaagtagctaaaatg
actgtttctggaaagaagcaaactatgggatttgaagtgcctggagaaaatggtcatggt
ctccacacacctcagaaaggacctcctggtgaagataacagcatcatttcttctgacagt
cttgacaccgtctctaagtcagctcttccaccccactccattcaagtgtccgaagagcag
agcgcaacgccgacgtcagtgaaaaagtctggcaagctgaagcagcagattgatgtgaaa
gtggaattggagaagcggcaaggcgggaagcagctcctcaacctagtggtcattggtcac
gttgatgcggggaaaagcactctgatgggccatttgctttatcttctgggtaatgtgaac
aaaagaactatgcataaatatgaacaggagtctaaaaaggctggcaaagcttcgtttgca
tatgcatgggtcttggacgaaacgggtgaagaaagggaaaggggagtgacaatggatgtt
ggcatgacaaagtttgaaactgcaaccaaagttattacattaatggatgctccaggccat
aaagattttattccaaatatgattacgggagcagcccaggcagatgtagctgtcttagtt
gttgatgccagcaggggagaatttgaagctggatttgagactggaggacaaactcgagag
catggcctcttggtccgatctcttggagtgacacaacttgcagttgcagtcaataaaatg
gatcaggttaattggcaacaagaaagatttcaagagattactggaaaacttggacaattt
cttaagcaagcaggttttaaggaaagtgatgtggcttttattcctacaagtggtctcagt
ggtgaaaatctaatcacaagatctcaatctagtgagctcacgaaatggtataaaggacta
tgtttattagaacaaattgattccttcaggcctcctcaaagatctattgacaagcctttt
agattatgtgtgtcagatgtcttcaaagatcagggatctggattttgtgtgactggtaaa
attgaagctggctatattcagactggtgaccgactgttggcaatgcctcctaatgaaact
tgtactgcaaaaggaatcactcttcatgatgaacccgtcgattgggcagcggcaggcgat
catgttagtcttactttggttgggatggatatcatcaaaatcaatgttggctgcatattt
tgtggccccaaagaacccattaaagcttgtactcgttttagagcccgaatcctcatcttt
aatattgaagttcctatcactaaaggatttcctgtgctgttacactaccagactgtcagt
gaacctgctgttattaaacgactgattagtgtcttaagcaaaagcacgggtgaagtcatg
aagaaaaagcctaagttattgactaaaggccagaatgcattggtggagctacaaacacaa
agaccagtagcccttgagctttacaaagacttcaaggagctggggaggttcatgctgcgt
tacagcggttctacaattgctgctggtgttgtcactgagataaaagaatga
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