Dipodomys spectabilis (banner-tailed kangaroo rat): 122096843
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Entry
122096843 CDS
T07891
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122096843 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122096843 (Vps35)
Membrane trafficking [BR:
dsp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
122096843 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
Imm5
FerA
Motif
Other DBs
NCBI-GeneID:
122096843
NCBI-ProteinID:
XP_042523296
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPIEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSVYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
QESRESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcacctcaggatgagcaggaaaagctcctggatgaagccata
caggctgtgaaggtacagtcttttcagatgaagagatgcctggacaaaaacaaacttatg
gacgctctgaaacatgcttctaacatgcttggtgaactccggacgtctatgttatcacca
aaaagctactacgaactttatatggctatttctgatgagcttcactacttggaggtctac
ctgacagatgaatttgctaaaggacgaaaagtagcagatctctatgagcttgtacaatat
gctggaaacataatcccaaggctctatctgttgattacagttggagttgtatatgtcaag
tcatttcctcagtccaggaaagatattttgaaagatttggtagaaatgtgccgtggtgta
cagcatccattgagaggtttatttcttcggaattatcttcttcagtgtaccagaaacatt
ttacctgatgaaggagagccaacagatgaagaaacaactggtgatattagtgactccatg
gattttgtactgctcaactttgcagaaatgaacaagctctgggtgcgaatgcaacatcaa
ggacatagccgagatagagaaaaaagagaacgagaaagacaagaactgagaattttagtg
ggaacaaatttggtgcgcctcagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgttttgacaggtatactggaacaagttgtgaattgtagggatgctttggctcaagaa
tatctcatggaatgtattattcaggtttttcctgatgaatttcatctccagacattgaat
ccttttcttcgggcctgtgctgagttacaccaaaatgtaaatgtaaaaaatataatcatt
gctttaattgacagattagctttatttgctcatcgtgaagatggacctggaatcccagct
gatattaaactttttgacatattttcacaacaggtggctacagtgatacagtctagacaa
gatatgccatcagaggatgttgtgtctttacaagtctctctaattaatcttgcaatgaaa
tgttacccagatcgtgtcgactatgttgataaagttctagaaacaacagtggagatattc
aataagctcaaccttgaacatattgctaccagtagtgcagtttcaaaggagctcaccaga
cttttgaagatacctgttgatacttataacaatatcttaacagtcttaaaattaaaacat
tttcacccactctttgagtattttgactatgagtccagaaagagcatgagttgttatgtg
ctgagtaatgttctagattataacacagaaattgtctctcaagaccaggtggactccata
atgaatttggtatccacattgatacaagatcagccagatcaacctatagaagatcctgat
ccagaagactttgctgatgagcagagccttgtgggccgattcattcatcttctgcgatct
gatgaccctgatcagcagtatttgattttaaacacagcacgaaagcattttggagctggt
ggaaatcagcggattcgcttcacactaccacctttggtatttgcagcttaccagctggct
tttcgatacaaagagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatc
ttttcatttgctcaccagactatcagtgctttaattaaagcagagctggcagaattacct
ctaagactttttcttcaaggagcactagctgctggagaaattggttttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctgtgtatgaagatgaaatcagtgat
tcaaaagcacagctggctgccataactttgatcattggtacttttgagaggatgaagtgc
ttcagtgaagagaaccatgaaccattgaggactcagtgtgcactcgctgcatccaaactt
ctgaaaaaacctgatcagggccgagctgtgagcacttgtgcacatcttttctggtctggc
agaaacacagataaaaatggggaggagcttcatggaggcaagagggtaatggaatgctta
aagaaagctctaaaaatagcaaatcagtgcatggacccctctctacaagtgcagcttttt
atagaaattctgaatagatacatctatttttatgaaaaggaaaatgatgcggtaactatt
caggttttgaaccagcttatccaaaagattagagaagatcttccaaatctagagtccagt
gaagaaaccgagcagattaacaaacattttcataacacactggaacacttgcgcttgagg
caggaatcacgagaatctgaggggccaatctatgaaggtctcgtcctttaa
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