Dipodomys spectabilis (banner-tailed kangaroo rat): 122097003
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Entry
122097003 CDS
T07891
Symbol
Hcfc1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03083
Polycomb repressive complex
dsp04980
Cobalamin transport and metabolism
dsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122097003 (Hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
122097003 (Hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122097003 (Hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dsp01009
]
122097003 (Hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122097003 (Hcfc1)
03029 Mitochondrial biogenesis [BR:
dsp03029
]
122097003 (Hcfc1)
Protein phosphatases and associated proteins [BR:
dsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122097003 (Hcfc1)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
122097003 (Hcfc1)
HMT complexes
COMPASS/SET1 complex
122097003 (Hcfc1)
MLL-HCF complex
122097003 (Hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
122097003 (Hcfc1)
Mitochondrial biogenesis [BR:
dsp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
122097003 (Hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
122097003
NCBI-ProteinID:
XP_042523382
LinkDB
All DBs
Position
Unknown
AA seq
2086 aa
AA seq
DB search
MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQAAAAAAAAAAAPPTTTTIQVLPTVPGSSIA
VPTAARTQGVPAVLKVTGPQATAGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQ
GTVIGSNPQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATV
KVASSPVMVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTV
VGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTK
GPLPAGTILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIP
MSAIITQAGATGVTSTPGIKSPITIITTKVMTSGTGTPAKIITAVPKIATGHGQQGVTQV
VLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTS
LAGAGAHSTSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQP
VSQPTQVTLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVC
SNPPCETHETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAASLVTSAVGQQNGSVVRV
CSNPPCETHETGTTNTATTATSNLAGQHGCSNPPCETHETGTTSTATTAMSNMGARQQRD
ARRASGTPTLVRITVAPGVSEGAPGAVKPPCQARQMCATSTTVTVMATGGPRSAGPMLRP
SAALEAAAHSPVFVQPAPPGSSKASLSAPGSKDVLLGCQLEPHPTYTSNTPTVALPVMGA
GEPGTVLGIPAPLYESLHPGVPSTTMTVTALEALLCPSATVTQVCSNPPCETHETGTTNT
ATTSNAGSAQRVCSNPPCETHETGTTHTATTATANGGAGQPDGGQQPPPGHPCETHQTTS
TGTTMSVSVGALLPDAAPAHRTLESAVSSQAGASLLTPFPTQRVCSNPPCETHETGTTHT
ATTVTSNMSSNQDPPPAASDQGEAESTQGDSINITSSSAITTTVSSTLPRAVTTVTQSTP
VPGPSVPKISSLTETAPGALTSEVPIPATITVTIANTETSDMPFSAVDILQPPEELQISP
GPRQQLPPRQLLQSTATPLMAESTEVLTASQTPELQAAVDLSSTGDPSSGQEPASSAVVA
TVVVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATE
EAQALAIQAVLQAAQQAVMGTGEPMDTSEAAAAVTQAELGHLSAEGQEGQATTIPIVLTQ
QELAALVQQQQQLQEAQAQQQHHLPTEALAPADSLNDPTIESNCLNELAGAVPNTVALLP
STATESLAPSNTFVAPQPVVASPAKLQAAATLTEVANGIETLGVKPDLPPPPSKAPVKKE
NQWFDVGVIKGTNVMVTHYFLPSEDAVPLDDDSSTVPDYNQLKKQELQPGTAYKFRVAGI
NACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAI
QSSQAGGESKSSAPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEK
GYGPATQVRWLQETSKDSSGTKPASKRPMSSPEMKSAPKKSKADGQ
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccgtgtcgcccgccaactcgccagcggtgctcttacagccccgctggaag
cgagtggtgggctggtcgggtcccgtgccccgaccccgccacggccatcgagccgtggcc
atcaaggagctcatcgtggtatttggcggcggcaatgaagggatagtggacgaactgcac
gtgtataacacggcaaccaaccagtggttcatcccagctgtgcgaggggacatccctcca
gggtgtgcagcctatggcttcgtgtgtgacggtactcgcctgctagtgtttggtgggatg
gtggaatatgggaaatacagcaacgacctctacgagctgcaggcgagccgatgggagtgg
aagagactcaaagcaaagacacccaaaaatggaccccctccgtgccctcggcttgggcac
agcttctcccttgtgggcaacaaatgctacctgtttgggggtctggccaatgatagtgaa
gaccccaagaacaacattccaaggtacctgaatgatttatatatcctggaattacgacca
ggctccggagtggtagcctgggacatccccatcacttacggggtccttcccccaccacgg
gagtctcatactgctgtggtctacactgagaaagataataagaaatccaagctggtgatc
tatggagggatgagtggctgcaggctgggggacctctggaccctggacattgagacgctg
acatggaacaagcctagcctcagtggggtggcaccccttcctcgcagtctccactctgca
actactataggaaacaaaatgtacgtgtttggtggctgggtgcctcttgtcatggatgat
gtcaaagtggctacacacgagaaggagtggaagtgcaccaacacgctggcttgtctcaac
ctggataccatggcctgggaaaccattctgatggacacactggaggacaacattccccgg
gcccgtgctgggcactgtgcagtcgccatcaacacccgcctgtacatttggagtgggcgc
gacggctaccgcaaggcatggaataaccaagtatgctgcaaggatctctggtacctggaa
acagaaaagccaccgcccccagcccgagtacaactggtacgagctaataccaactctctg
gaggtgagctggggggcagtggcaacagccgacagttaccttcttcagctccagaaatat
gacattcctgccacggctgctaccgccacctcccccacacccaatccagtcccatccgtg
cctgccaaccctcccaagagccctgccccagcagcagctgcgcctgctgtacagccgctg
acccaagtaggcatcacgctcctgccccaagctgctgctgccgctgctgctgccgccgcc
gcacccccaaccactaccactatccaggttttgcccaccgtgccaggcagctccattgct
gtgcccaccgcagccaggactcaaggtgtccctgctgttctcaaagtgactgggcctcag
gccactgcaggaaccccattggtcactatgcggcctgccagtcaagctggaaaagcccct
gttactgtgacctccctgcctgctggtgtacgaatggttgtgcccacacagagtgcccag
gggacggtgattggcagcaacccacagatgagtggaatggctgccctagcagctgctgcc
gccgccacccagaaaatccccccttcctcggcacccactgtgctgagtgtcccagcgggg
accaccattgtcaagactgtggctgtcacacctggcacgaccaccctcccggccactgtg
aaggtggcctcctcccctgtcatggtgagcaacccagccactcgcatgctgaagaccgca
gctgcccaagtgggcacatctgtgtcctctgcggctaacacatctacccgccctatcatc
acggtacacaagtctggaacagtgacggtggctcagcaagcccaagtagtgaccacggta
gtgggcggtgtcaccaagaccatcaccctggtgaaaagccctatctctgtcccaggaggc
agtgctctgatttccaatctggggaaagtgatgtcagtggtccagaccaaaccagttcag
acttcagctgttactggccaagcgtctacaggccccgtgactcagatcatccagaccaaa
ggtcccctgccagcagggacaatcctgaagctggtgacctcagccgatggcaagcccacc
accattatcaccaccactcaggccagtggggccgggaccaagcccaccatcttgggcatt
agcagtgtctcccccagtaccaccaaacccggcacgaccaccattatcaagaccatcccc
atgtcggccatcatcacccaagcgggtgccacaggcgtgaccagcactcccggcatcaag
tcccccatcaccatcatcaccaccaaagttatgacttcggggactggaacacccgccaag
atcatcaccgctgttcccaagattgctacaggccacgggcagcaaggagtgacccaggtg
gtgctaaagggggcccctggacagccaggcaccatcctccgcaccgtgcccatgggcggc
gttcgcctggtcacccctgtcaccgtctccgctgtcaagccagccgtcaccacattggtt
gtgaagggcaccacaggtgtcacaaccctaggcacagtgacgggtaccgtctctaccagc
cttgctggcgctggggcccacagcaccagcgcctccctggctacacccattaccaccctg
ggcaccattgccaccctctcgagtcaggtgatcaatcctactgccatcactgtgtctgcg
gcccagactaccctgacagctgccggtggcctcaccacccccaccatcaccatgcagccc
gtctctcagcctacccaggtgactttgatcacagcacccagtggagtggaggcccaaccc
gtgcatgaccttcctgtgtccattctggcctcacctacgacagaacagcccacggccacg
gtcaccattgctgactcggggcaaggggatgtgcagcctggcacggtgaccctggtgtgc
tccaacccgccctgcgagacgcacgagacgggcaccaccaacaccgccaccaccaccgtg
gtggctaaccttgggggccacccccagcctacccaagtgcagtttgtttgtgacagacag
gaagcagcttcactcgtgacctctgccgtgggccagcagaatggcagcgtggtccgcgtc
tgctccaatccgccctgtgagacccacgagacaggcaccaccaacacagccaccacagcc
acgtccaacctagccgggcagcatggctgctccaacccgccctgcgagacccacgagacg
ggcaccaccagcactgccaccacggccatgtccaacatgggggcccggcagcagcgagac
gcccgtcgcgcctcgggcacccccactctggtccgcatcactgtggctcctggggtgtca
gagggagccccgggcgctgtcaagcctccgtgccaagcccgccagatgtgcgcaacaagc
accactgtgactgtgatggccaccgggggcccgcgctcagccgggcccatgctcaggccc
agcgctgccctggaggctgcggcccacagccctgtttttgtgcaacctgcccctccaggc
agcagcaaagccagcctgagcgctcccggcagcaaggacgtgctcctcgggtgccagctg
gagccccatcccacctacacctccaacaccccgaccgtggccctccccgtgatgggggcc
ggggagcctggcactgtgctgggcatccctgcgcccctgtacgagagcctgcacccggga
gtgcccagcaccaccatgactgtgacggccctggaggcgctgctgtgcccctcggccacc
gtgacccaagtgtgctccaacccaccctgtgagacccacgagacgggcaccaccaacacc
gccactacctccaatgcgggcagcgcccagcgggtgtgctccaacccgccttgcgagact
cacgagacgggcaccactcacacggccaccactgccaccgccaacgggggtgcaggccag
cccgatggcgggcagcagcccccaccaggccacccctgcgagacacaccagaccacttcc
actggcactaccatgtcagtcagtgtgggcgccctgctgcccgacgccgcccccgctcac
aggaccctagagtccgccgtctcctcccaggccggtgcttcattgctgactcccttcccg
acacagagggtgtgctccaaccctccctgtgagacccacgagacgggcaccacgcacaca
gccaccactgtcacctccaacatgagctcaaaccaagaccccccaccagctgccagtgac
cagggggaagcggagagcacccagggtgacagcataaacatcaccagctccagtgccatc
accacgactgtgtcctccacgctgccccgagcggtgaccaccgtgacacagtccacacca
gtaccaggcccctctgtgccgaagatctcatcactgactgaaactgccccaggggctctg
acttccgaagtccccattccggccaccataacagtgaccatagccaacacagaaacttct
gacatgcccttctctgctgttgacatcctgcagcccccggaagaactccagatctcacca
gggcctcgccagcagctgccaccccggcaactcctgcagtctaccgccacgcccctgatg
gcggaatccaccgaggtcctgacagcttcccagacccctgagctccaggccgccgtggat
ctgagcagcacgggggacccatcttcgggccaggagcctgccagctcggcagtagtggcc
actgtggtggtccagccgcccccgcccacgcagtctgaagtagaccagttgtccctgccc
caagagctgatggctgaggcccaggcgggcaccaccacgctcatggtgacagggctcacc
cccgaggagctggcggtgactgcagcagctgaagcagctgcccaggctgcagccacagag
gaagctcaggccctggccatccaggcagtgctccaggctgcccaacaggccgtcatgggt
acgggggagcccatggatacctctgaggcggcagcggccgtgacccaggctgagctggga
cacctttcagccgaaggccaggagggccaggccaccaccatccccattgtgctgacccag
caggagctggctgccctggtgcagcagcagcagcagctgcaggaggcccaggcccagcag
cagcaccacctccccaccgaggccctggcccccgccgacagcctcaatgacccaaccatc
gagagcaactgtctgaacgagctggccggggctgtccccaacacggtggccttgttgcct
tctacggccaccgaaagcctggctccatccaacacgttcgtggccccccagcctgttgtg
gccagcccagcaaagctgcaggctgcggctaccctgactgaagtggccaatggcattgag
actttgggcgtgaaaccagacttgccacccccacccagcaaagcccccgtcaaaaaggag
aaccagtggtttgacgtgggggtcattaagggcaccaatgtaatggtgacccactacttt
ctgccatcagaagacgctgtcccgttggatgatgactcgagcacagtccctgactataac
cagctgaagaagcaggagctgcagccaggcacagcctacaagtttcgtgttgctggtatc
aacgcctgtggccgggggcccttcagtgagatatcggcctttaagacctgtctgcctggc
tttccaggagctccttgtgccattaaaattagcaaaagtcccgatggtgcccacctcacc
tgggagccgccctcggtgacgtctggcaagatcatcgagtactctgtgtacctggccatc
cagagctcccaggccggaggcgagtccaagagctcggccccggcgcagctggccttcatg
cgagtgtactgcgggcccagcccttcctgcctagtgcagtcgtccagcctgtccaatgcc
cacattgactataccaccaaacccgccatcatcttccgcatcgccgcccggaatgagaag
ggctatggcccagccacgcaagtgaggtggttgcaagaaaccagtaaagacagctcgggc
accaagccagccagcaagcggcccatgtcctctccggagatgaaatctgctccaaagaag
tcgaaggcagatggccagtga
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integrated database retrieval system
