Dipodomys spectabilis (banner-tailed kangaroo rat): 122097103
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Entry
122097103 CDS
T07891
Symbol
Fbxo40
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122097103 (Fbxo40)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122097103 (Fbxo40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
GHL5
Motif
Other DBs
NCBI-GeneID:
122097103
NCBI-ProteinID:
XP_042523529
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MGRARRPPPGQHRHCEGCINRHCHVPVEPSISCLVISCRLLCGATFHMCKEAEHELLCPL
EQVPCLNSEYGCPLSMSRHKLAKHLQVCPASVVCCSMEWNRWPNVDSETILHENIMKENP
SEECLDTALALQDQKVLFRSLKMVELFPETRDTTEEEPMNGEASWEELGGAVGGTDVRSA
PHGCLSVMNGEMMELSQEEREMLAKTKEGMDLVKFGKWENMFSKEHAASALTGSAGMCEN
KSRNGGGKERSSGGNDSADTKDASRGTTAQEDQKQQEFAAAMEMTGFAPWQDGVLERLKT
AVDPKDYNMYLVHNGRMLIHFGQMPACTPKERDFVYGNLEAQEVKTVYTFKVPVSYCGKR
ARLGDAMLRCRPSEHKAVDTSDLGVTVEDLPKSDLIKTTLQCALERELKGHVISESRSID
GLFMDFATQTYNFEAEQFSSGTVLADLLNTGNPGGLHVELHSECVTRRHNKSSSAFTFTC
NKFFRRDEFPLHFKNVHTDIQSCLNGWFQHRCPLAYLGCTFVQNHFRPPGPKAKVIYSQE
LKTFAIKPEVAPELDEGRNNHLSGHGGKSQNSLTSLPLEVLQYIAGFLDSISLSQLSQVS
MLMKNICATLLQERGMVLLQWKKKRYSHGGTSWKVHRQIWQFSSLFSKIKSWEFNEVTSM
SEHLKACPFNIIEHKTDPIRLTSMCQPHEQARESLVSTFRARPRGRHT
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggcacgcaggcccccacctgggcagcacaggcattgtgaaggatgcatcaac
cgccactgccatgttcctgtggaacccagcatctcctgcctggtgatcagttgccgcctg
ctctgcggtgccaccttccacatgtgcaaagaggcagagcatgaactcctctgcccttta
gagcaggttccatgtctcaattctgaatatggctgccctctctccatgtcccgccacaag
ctggccaagcatcttcaggtatgccctgctagtgtggtctgctgctccatggaatggaac
cgctggccaaacgtagactcagaaaccatccttcatgagaacatcatgaaagaaaacccc
agtgaggagtgtttggacacagccctggcccttcaggaccagaaagttctcttcagatca
ttgaagatggtagaacttttcccagaaactagagacaccactgaggaggaaccaatgaat
ggtgaagccagttgggaagagctgggaggtgcagtggggggaactgatgtacgttcagca
ccacatggctgtctgtcagtaatgaatggggaaatgatggagttaagtcaagaagaacgg
gagatgttagccaaaactaaagaaggaatggatctggttaagtttggcaagtgggaaaat
atgttcagcaaagagcatgctgcctctgctttaacaggctcagcagggatgtgtgagaac
aagagcaggaatggaggagggaaagaacggagttctggtggtaatgactccgctgacaca
aaggatgcttcaagagggacaacagcacaggaagaccagaagcagcaggaatttgccgca
gccatggaaatgacaggttttgccccctggcaggatggtgttctggaaagactgaaaaca
gctgtagacccaaaagactataacatgtacctagtacacaatggtcgaatgctcatccac
ttcgggcagatgcctgcttgtacccctaaggagagagactttgtgtatggcaacctcgag
gctcaagaagttaagaccgtctacaccttcaaagtacccgtgagctactgtggaaaacga
gcccgccttggagatgccatgctgagatgtaggccaagtgagcacaaggctgtggatact
tcagatttaggggtcaccgtggaggacctgccaaaatcagatctcatcaagaccaccctc
cagtgtgctttggaaagagaactcaaaggccacgtcatttctgagtccaggagcattgat
gggttgttcatggattttgccacccagacgtacaactttgaagcagaacagttttcctca
gggactgtgctggctgaccttctgaacactggcaaccccgggggactccacgtggagctc
cacagtgagtgtgtgaccaggagacacaacaaaagtagctctgcctttacgtttacctgc
aataagttcttccggagggatgaatttcccctgcacttcaagaatgtccatacagacatt
cagtcatgtctcaatggctggttccaacatcgatgccccctagcctacttagggtgtacg
tttgttcaaaaccatttccgtcctccagggccaaaggcaaaagtgatctacagtcaagag
ctcaagacctttgccatcaagccagaggttgcccctgagcttgatgagggaagaaataac
catctctcaggccatggaggaaaaagccagaattctttaacaagcttgcccctggaggtt
ttgcaatacattgctgggttcttggacagcatcagcctgtcccagctctcccaggtttct
atgctgatgaagaatatctgtgccactctgttacaagagagagggatggtcctcttacaa
tggaagaagaagaggtattcccatggaggcacttcctggaaagtccacagacagatctgg
cagttcagcagccttttctccaaaatcaagagctgggagtttaatgaagtcacctccatg
tctgagcatctgaaggcctgtcctttcaacatcatagagcacaagactgacccgatccgt
ttgaccagcatgtgtcaaccccatgagcaggctcgggagagcttagtgtccacctttagg
gccagaccacgaggaagacacacctaa
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