KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122097156
Entry
122097156         CDS       T07891                                 
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
  KO
K13174  THO complex subunit 5
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122097156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsp03019]
    122097156
   03041 Spliceosome [BR:dsp03041]
    122097156
Messenger RNA biogenesis [BR:dsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     122097156
Spliceosome [BR:dsp03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122097156
SSDB
Motif
Pfam: FmiP_Thoc5 NIPSNAP DUF2748
Other DBs
NCBI-GeneID: 122097156
NCBI-ProteinID: XP_042523563
LinkDB
Position
Unknown
AA seq 949 aa
MAPRLCSISVSARRLLRSPGPRTGDGAAAAAARFYSKDNESSWFRSLFVHKVDPRKDAHS
TLLSKKETSNLYKIQFHNVKPECLDAYNSLTEAVLPQLHLDEDYPCSLVGNWNTWYGEQD
QAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRKERSRMLLSRRNQLLLEFSFWNEPQPRA
GGNIYELRTYKLKPGTMIEWGNNWARAIKYRQENQEAVGGFFSQIGELYVVHHLWAYKDL
QSREETRNAAWRKRGWDENVYYTGTAMSSESSKKRKPKVIRSDGAPTEGKRSRSDIEQEG
KYYSEEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERKIQSCVH
FMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKH
EEIDLVTLEEFYEEAPPDISKVEVTTGDPHQQTLARLDWELEQRKRLAEKYRECLSSKEK
ILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQ
ATAYGQACDKTLSVAIEGSVDEAKALFKSSEDSQDDESDSDAEEEQTTKRRRPTLGVQLD
DKRKEMLKRHPLSVVLDLKCKDDSVLHLTFYYLMNLNIVTVKAKVTTATELITPISAGDL
LSPDLVLSCLYPGDHGKKTPNPANQYQFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPK
EQPQHTVIADHWQSASHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAK
VVSRLVKWMTMAHEDYTELHFTKNIVEAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYS
SIPPIFQLCLNWKGEKTNSNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLD
VYLETESHDDSVEGPKEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggctccgcggttgtgcagcatctccgtgagcgcgcggcggctgctgcggagccctggg
ccccgcaccggggacggcgcggctgcagctgcggcgcgtttctactccaaggacaatgaa
agcagctggttccgctccctcttcgtccacaaggtggatccccggaaggatgcccactct
accctgctgtccaagaaggagaccagcaacctctacaagatccagtttcacaatgtgaag
cctgagtgtctggatgcctacaacagcctcacggaggccgtgctgccccagctgcacttg
gatgaggactatccctgctcgctcgtgggcaactggaacacgtggtatggggagcaggac
caggcagtgcacctatggcgattctcaggcggctacccagccctcatggactgcatgaac
aagctcaaaaacaacaaggaatacctggaattccggaaggagcggagccggatgctgctg
tccaggaggaaccagctgcttctggagttcagcttctggaatgagccacagcccagagcc
ggcgggaacatctatgagctgaggacctacaagctcaagccaggaaccatgatcgagtgg
gggaacaactgggcccgggccatcaaataccggcaggagaaccaggaggctgtgggcggc
ttcttctcacagataggggagctctacgttgtgcatcacctctgggcctataaggacctg
cagtctcgagaagagactcgaaacgctgcctggaggaagcggggctgggatgaaaatgtt
tactatacagggacagccatgtcatcagaatccagcaaaaaacggaaacccaaagtgatt
cgaagcgatggagctccaactgaaggaaaaagaagtcgatctgacattgagcaggaaggt
aaatactatagtgaggaggctgaggtggacctgcgggaccctgggagagactatgagctg
tacaagtacacgtgtcaggagctgcaaaggctgatggccgagatccaggacctgaaaagc
aggggcggcaaggatgtggcaattgaaattgaagaacggaaaatccagagctgcgtgcat
ttcatgactctaaagaagcttaaccgattggcccacatcaggttgaagaaaggaagagat
cagacccacgaggctaagcagaaggtagatgcctaccacctgcagctacagaacttgctg
tacgaggtgatgcacctacagaaggagatcaccaaatgtttggagttcaagtctaagcat
gaagaaatcgatctggttactttagaggaattttatgaagaggctccaccagacatcagc
aaggttgaagtcaccacaggagaccctcaccagcagaccctggcacgtctggactgggag
ttggagcagcggaaaaggctggcagagaagtaccgagagtgcctgtccagcaaagagaag
atcctgaaagagatagaggtgaagaaggagtacctgagcagcctccagcctcgcctcaat
agcatcatgcaggcttccctcccggtgcaggagtatctatttatgccttttgaccaagct
cacaagcagtatgagactgccaggcacctgccgccacccctctatgtgctctttgtccag
gccactgcatatgggcaggcctgtgataagaccttgtctgtggcaattgaaggcagtgtg
gatgaagccaaggctctattcaagtcctctgaggactcccaagatgatgagagtgactca
gatgctgaggaggaacagaccacgaaacggcggcgacccacactgggggttcagctggat
gacaagcgcaaggagatgctgaagagacacccgctgtctgtcgtgcttgacctaaagtgc
aaagatgacagcgtgctccacctgaccttctactatcttatgaacctcaacattgtgaca
gtgaaagccaaagtgacaactgccacagagctgatcacgcccatcagtgcaggggatttg
ctgtcgcctgacttggtgctgagctgtttgtatcctggggatcatggaaagaaaactcca
aatccagccaatcagtatcagtttgataaagttggcatcctgactttaagagactatgta
cttgacttaggtcacccctatttgtgggtacagaagcttggtggcctccacttccctaaa
gagcagccccagcatacggtgatcgctgaccactggcagagcgccagccacatggagact
accatgaaactgctgaagaccagagtgcagtcccgcctggccctccacaagcaatttgca
tccctggaacacggcattgtgcctgttaccagcgattgccagtacctctttcctgccaag
gttgtctctcgtctagttaagtggatgacgatggcccatgaggattacacggagctgcat
tttaccaagaacattgtggaggcaggcctggctggggacaccaatctctactacatggca
cttattgaaaggggcacagccaaactccaggccgctgtggtgctgaacccgggatactcc
tccatcccacccattttccagctctgtctgaactggaaaggagagaagactaacagcaat
gatgacaacatccgggccatggagagcgaggtcaacgtgtgttacaaggagctgtgtggc
ccccggcctagccaccagctcttgaccaaccagctgcagcggctgtgtgtgctactggat
gtctacctggagactgagagccacgatgacagtgtggagggacccaaggaatttccccag
gagaagatgtgtctacggctcttcaggggtccaagcaggatgaagccgtttaaatataac
catcctcagggattcttcagccatcgctga

DBGET integrated database retrieval system