KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122097421
Entry
122097421         CDS       T07891                                 
Symbol
Exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122097421 (Exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsp03019]
    122097421 (Exosc5)
Messenger RNA biogenesis [BR:dsp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     122097421 (Exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 122097421
NCBI-ProteinID: XP_042523838
LinkDB
Position
Unknown
AA seq 229 aa
MEGPPHSDRGTESGPKVPSCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKV
NKEIFNKATLEVILRPKIGLPGVAEKSRERMIRNTCEAAVLGALHPRTSITVVLQVVSDA
GSLLACCLNAACMALVDAGVPMKALFCGITCALDSDGTITLDPTDKQEKEARAVLTFALD
SVEQKLLMSTTKGFYSNSELQQCLAAAQAASQHVFRFYRESLQRRYSKS
NT seq 690 nt   +upstreamnt  +downstreamnt
atggaagggcccccgcattccgaccgtggaacggaatcgggtcccaaggtccccagctgc
agcctgaggcactttgcttgcgaacagaacttgctctcccggcctgatggctcagcttct
tttctccaaggagatacctcagttctggcaggtgtgtacgggccagcagaggtgaaggtg
aacaaggagatctttaacaaggccacccttgaagtgatcctgaggccaaagatcgggctg
cctggtgtggctgagaagagccgggagcggatgatcaggaacacatgcgaggcggcagtc
ctgggggccctgcacccccgtacttccatcactgtcgtcttgcaggttgtcagtgatgct
ggctctctcctggcctgttgcctgaatgctgcctgcatggcactggtggatgcaggtgtg
cccatgaaagctcttttctgcggcatcacctgtgccttggactctgatgggaccatcacg
ctggaccccacagacaagcaagaaaaggaagcccgggccgtcctgacctttgccctcgac
agtgtagagcagaagctgttgatgtccaccaccaaggggttctactccaattctgagctc
cagcagtgcctggccgctgcgcaggcggcctcccagcatgttttccgcttctaccgggag
tcactgcagaggcgctactccaagagctga

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