Dipodomys spectabilis (banner-tailed kangaroo rat): 122097454
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Entry
122097454 CDS
T07891
Symbol
Sptbn4
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04517
IgSF CAM signaling
dsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122097454 (Sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122097454 (Sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dsp04812
]
122097454 (Sptbn4)
Cytoskeleton proteins [BR:
dsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122097454 (Sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
122097454 (Sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
RASSF_helical
DUF7854
PMC2NT
SOS1_NGEF_PH
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
122097454
NCBI-ProteinID:
XP_042523889
LinkDB
All DBs
Position
Unknown
AA seq
2572 aa
AA seq
DB search
MAQVPGELDNMEGLPAPNNNNPAARWESPDRGWDREPMATSTAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYTDLRDGFVLTRLLEVLSGEPLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFGKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIERYEELAAELLAWIHRTIGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDVDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALATEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELQAQAARRRGELEASRRLWALLQELEEAESW
ARDKERLLEAAAGAAAGPAAGGRGGAGGGGAHDLSSTARLLAQHKILQGELGGRRALLQQ
ALRRGEELAAAGGGPDLGSGADAVQLAGLAERAASARRRWQRLEEAAARRERRLQEARAL
HQFGADLDGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGSLRRQ
LATLGGASGAGPLVVALQVRVVEAEQLFAEVAEVAALRRQWLRDALAVYRMFGEVHACEL
WIGEKEQWLLAMRVPDSLDDVEVVQHRFESLDQEMNSFMSRVLDVNHTVQELVEGGHPSS
DEVRSCQDHLNSRWNRIVELVEQRKEEVSAVLLVENHVLEVAEVRAQVREKRRAVESAPR
AGGALQWRLSGLEAALQALEPRQAALLEEASLLAERFPAQAARLHQGAQELGTEWGALAS
SAQACGEAVAAAGRLQRFLHDLDAFLDWLVRAQEAAGGSEGPLPSSLEEADALLARHAAL
KEEVGQREEDYARIVAASEALLAADGAELGPGLALDEWLPHLEIGWHKLLGLWEARREAL
VQAHVYQLFLRDLCQALAVLRNQEVALSSAELPGTVESVEEAIKRHRDFLTTMELNQQKM
QVAVQAAEGLLRQGNVYGEQAQDAVTRLLEKSQENQLRAQQWMQKLYDQLGLQHFLRDCH
ELDGWIHEKMLMARDGTREDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLIQEKP
ELAASVRKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQD
VDPGGDLATVNSQLKKLQSMQSQVEEWYREVGELQAQTASLPLEPASKELVGERQNAVGE
RLVRLLEPLQERRRLLLASKELHQVAHDLDDELAWVQERLPLAMLTERGDGLQAVQQHIK
KNQSLRREIQAHGPRLEEVLERAGALASLRSPEAEAVRRGQEQLQSAWGGLREAAERRQQ
SLDAAFQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEE
SIAQLSRQCRALLEMGHPDSEQISRRQSQVDRLYVSLKELGEERRVSLEQQYWLYQLSRQ
VDELEHWIAEKEVVAGSPELGQDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVDELI
ECGHTAAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRR
RLPRLTAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIAS
REQEVLQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIASQIGAADKPRDVS
SVEVLMNYHQGLKTELEARVPELTACQELGRSLLLNKSPMADEIQAQLDKLGSRKEEVSD
KWDRHWEWLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRK
AAAAWEERFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYDR
GLEPLTRRASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEAPARAEPVSPPAAPSDTV
DAPVSPITVVEQVRPRPERQEAADRAPEELPRRRRPERQESADQPEETSRRRRSERQESV
EHETAHSLTLGRYEQMERRRERRERRLERQESSEQETPTRGELVKGKATLADIVEQLQEK
EAGPGLPAAVPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEG
GGSRRSRSAPAQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKG
ELGFYKDAKGPASGGTHGGEPLLSLHKATSEVANDYKKKKHVFKLQTQDGSEYLLQAKDE
EEMNGWLEAVAASVAEHAEIARWGQTLPTTSSTDEGNPKREAGERRASGRRK
NT seq
7719 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggttccaggggaactggacaacatggagggcttgcctgcccccaacaacaac
aaccctgcagcccgctgggagagtccagatagaggctgggaccgggagccaatggccacc
tccacagcagccgcttcactctttgagtgctctaggatcaaggccttggcagatgaacgg
gaggccgtgcagaagaaaaccttcaccaagtgggtgaactcccacctcgcccgcgtgggc
tgccacatcggggacctctacaccgacctgcgggacggcttcgtgctcaccaggctcctg
gaagtgctgtctggggagccgctgccgaggcccacgcggggccgcatgcggatccactca
ctggagaacgtggacaaggccctgcagttcctcaaggagcagcgcgtgcacttggaaaac
gtgggatcgcacgacatcgtggacgggaaccaccggctgacgctggggttggtctggacc
atcatcctgcgcttccagattcaagtcatcaaaatcgagacggaggacaacagagagacg
cgctcagccaaggatgctctgcttctatggtgccagatgaaaacagctggttacccagag
gtgaacatacagaatttcaccaccagctggcgggatggcctggccttcaacgccctcatc
catcggcacaggcccgatcttgtggatttcggcaaactcaccaagtccaacgccaactac
aacttgcagagagccttccgcacagctgagcagcatctggggctggcacgtttgctggac
cctgaagatgtgaacatggaagctccggatgagaagtcaatcatcacatatgtggtgtct
ttctaccactacttctccaagatgaaggccctggcggtagagggcaagcggattgggaag
gtcctggatcaggtgttggaggtgggaaaaatcatagagcgctatgaggagctggcagcc
gaattgctggcctggattcatcgcaccataggtcttatcagcaaccagaagtttgccaac
tccctgagcggggtgcagcagcagcttcaggctttcacggcctactgcacactggaaaag
cctgtcaagtttcaggagaaggggaatttggaggtgcttctcttcagcatccagagtaaa
ttgcgtgcgtgcaaccgtcgcctctttgtgcctcgggagggctgtggcatctgggatgtt
gacaaggcctggggtcagttggagaaggcagagcatgagcgggaggctgccttacgggct
gagctgatccggcaggagaagctagaactgctggcccagaggttcgaccacaaggtggcc
atgagagagagctggctgaatgagaaccagcgtctggtctcccaggacaactttgggtac
gagctgccagccgtggaagcagccatgaagaagcacgaggcaatcgaggcagacatcgca
gcctatgaggagcgggtgcagggagtggccgaactggctcaggcattggccaccgaaggc
tattacgatgcccggcgtgtggcggctcaacgggacagtgtcttacgccagtgggctctg
ctgactgggctggtgggtgcccggcggactcgcctggagcagaacctggctctgcaaaag
gtcttccaggagatggtctacatggtggactggatggaggagatgcaggctcagctactg
tcccgggagtgtggacagcacctggtggaggcggacgacctgttacagaagcacgggctg
ttggagggggacatcgcggcccagagcgagcgggtagaggctctcaacgctgcggccctg
cgattctcccagctgcagggctaccagccttgcgacccgcaggtcatctgcaatcgcgtg
aaccacgtgcatggctgcctggcggagctgcaggcgcaggcggcccgacggcgcggggag
ctggaggcgtcgcggaggctgtgggcgctgctgcaggagctggaggaggcggagagctgg
gcccgggacaaggagcggctcctggaggcggcggcgggggccgcggcggggccggcggcg
ggggggcgcggcggggccggcggcgggggcgcgcacgacctgtccagcaccgcacgcctg
ctggcccagcacaagatcctgcagggcgagctgggcgggcggcgggcgctgctgcagcag
gccctgcggcggggcgaggagctggcggcggccggcggcggccccgatctgggctccggc
gccgacgccgtgcagctggcgggtttggcggagcgcgcggcgagcgcccggcgccgttgg
caacgcctggaagaggcggcggcgcggcgggagcggcggctgcaggaggcgcgggccctg
caccagttcggagccgacctggacgggctcctcgattggcttcgcgatgcttaccgtctg
gcagccgccggggatttcggccacgacgaagcgtccagccggcgcctggcgcgccagcac
cgcgcgctcaccggggaggtggaagcgcaccgcgggcccgtgggcagcctgcgccgccag
ctggcgacgctagggggcgcgagcggcgcggggccgctggtggtggcgctgcaggtgcgc
gtggtggaggccgagcagctgttcgccgaggtggccgaggtggcggcgctgcggcgccag
tggctgcgggacgcgcttgccgtgtaccgcatgttcggcgaggtgcacgcgtgcgagctg
tggatcggcgagaaggagcagtggctgctcgccatgcgcgtgcccgactccctggacgac
gtcgaggtggtgcagcaccgattcgagagcctagaccaggagatgaatagtttcatgagc
cgcgtcctggatgtgaaccacacggtccaagagctcgtggaaggaggtcaccccagttca
gatgaggtgcgctcttgccaggaccacctcaacagcaggtggaaccgcattgtggagctg
gtggagcagcgcaaagaggaggtgagcgcggtgctgctggtggagaaccacgtgctggag
gtggcggaggtgcgcgcccaggtgcgggagaagcggcgggcggtggagagcgcaccccgg
gccggcggcgccttgcagtggcgcctgagtggcctagaggcggctttgcaagcgctggag
ccacgccaggcggccctcctggaggaggcgtccctgctggccgagcgcttcccggcgcag
gcggcgcggctgcaccagggcgcccaggagctggggaccgagtggggcgccttggcgagc
tcggcccaagcctgcggcgaggcggtggcggcggccgggcggctgcagcgtttcctgcac
gacctggatgctttcctggactggctggtgcgtgcccaggaggcagcggggggcagcgag
gggcccctgcccagcagcctggaagaggccgatgcgctgctggcgcgccacgctgccctc
aaggaggaagtgggtcagcgcgaggaggattacgcgcgcatcgtggcggccagcgaggcg
ctgttggcggccgatggcgccgagctgggcccgggcctggctcttgatgagtggctccca
cacctggaaattggctggcacaaactgctcggcttgtgggaggcgcgccgggaggccctg
gttcaggcccacgtctatcagctcttcctgcgtgacttgtgccaggcgctcgctgtgctg
cgcaatcaggaggtggcgctgtccagcgcagagctcccaggcacggtagagtctgtagaa
gaagccataaaaagacacagggattttctcaccacgatggagctgaaccagcaaaagatg
caggtggcggtgcaggctgccgagggcctgctgcggcagggcaacgtctacggggagcag
gcccaggacgctgtgacccggctgctggagaagagccaagaaaaccaattaagagcccag
cagtggatgcagaagctatacgaccagcttggactgcagcacttcctccgagactgccat
gagctggatggctggatccacgagaaaatgctgatggcgagggacggcacacgtgaagat
ggccacaagcttcacaagagatggctccggcaccaggcattcatggctgagctggctcag
aataaggagtggctggagaagatcgagagggaaggccagcaactgattcaggaaaagccg
gagctggcggcttctgtgaggaagaagctgggtgagatccggcaatgctgggccgagctg
gagagcaccacccaggccaaggcccggcagctctttgaggccagcaaagcagaccaactt
gtgcagagtttcgcagagctggataagaaacttcttcacatggaaagtcaactgcaggat
gtggatcctggtggggacctggccactgttaacagccaactcaagaagctgcagtccatg
caatctcaggtggaagaatggtaccgagaggtgggagaattgcaggcgcagacggcttcg
ctgccgctggagccggcgagcaaggagctggtgggcgagcggcagaacgcggtgggcgag
cgcctggtgcggctgctggagccgctgcaggagcgccgccgcctgctgcttgcctcaaag
gagcttcaccaagtggcccacgatctggatgatgagctggcttgggttcaggaacggctg
cctctggccatgctgactgagcgaggggatggtttgcaggctgtccagcagcacatcaaa
aagaaccagagcctgcgtcgcgagatccaggcgcacgggccgcgtctggaggaggtgctg
gagcgcgcaggcgccctggcctcgctgcgcagccccgaggccgaggccgtgcgccggggc
caggagcaactgcagagcgcctggggcgggctgcgggaagcggccgagagacggcagcag
tcgctggacgccgccttccaggtggagcagtactacttcgacgtggccgaggtggaggcg
tggctgggtgagcaggagctgctcatgatgagtgaggacaagggcaaggatgaacagagc
accctgcagctgctcaagaagcacctgcagctggagcagggcgtggagaactacgaggaa
agcatcgcgcagctttcgcgccagtgccgggcgctgctggagatggggcatccggacagt
gagcagataagccggcgtcagtctcaggtggatcgtctgtacgtgtcactcaaggaactg
ggcgaggagcgcagggtgagcctggagcagcaatactggctgtaccagctcagccgtcag
gtggatgagctggagcattggattgcagagaaggaggtagtagctggctcacctgagctt
ggccaggacttcgagcatgtctcggtgctgcaggagaaattctcagagttcgccagtgag
acaggcacagccggcagggagcggctggcagccgtgaaccagatggtggatgagctgatc
gagtgcgggcatacggcagcagccaccatggccgagtggaaagatgggctgaacgaggcc
tgggccgagctgctggagctcatgggcacgcgtgcccagctgctggctgcctcccgggag
ctacacaagttcttcagcgatgccagagagcttcaaggacagatcgaggagaagcgcagg
cggctgccccgcctgaccgctccgccggagccgagacccagtgccagctccatgcagagg
accctgcgagccttcgagcacgacttgcagctcctcgtgtctcaggtacggcagctgcag
gagggcgcagcccagctgcgcaccgtgtatgcgggcgagcacgcagaggccatcgccagc
cgggagcaggaggtgctgcagggctggaaggagctgctggctgcctgcgaggatgcccgg
ctgcacgtgagctccacggccgacgccctgcgcttccacagccaggcccgggacctgctg
tcttggatggacggcatcgccagccagatcggagcagctgacaaacccagagatgtgtct
tctgtggaggtgcttatgaactaccaccagggcctgaagacggagctggaagcacgggtg
cctgagctgactgcctgccaggagctggggcgctctctcctgctcaacaagagtcccatg
gctgatgagatccaggctcagctagacaagctgggaagtaggaaggaagaagtgtcggac
aagtgggaccgccattgggagtggcttcagcagatgctggaagtgcaccagtttgcccag
gaggcggtggtggctgatgcctggttgacagctcaggagcccctcctgcagagccgggag
ctgggcagcagcgtggacgaggtggagcagcttatccggcgacatgaagccttccgcaaa
gcagccgcagcgtgggaagagagattcagctctctacgacgcctgaccacgatcgagaaa
ctgaaggccgaacagagcaagcaaccacccacccctctgctggggcgcaagttctttggg
gatcccacggaactggcagccaaagcagcccctctgctgcgaccagggggctacgacaga
ggcttggagcccctgacccgaagggcctcggacacgctgtcggccgaggtgcggacccgg
gtggggtacgtgcgccaagagctcaagcccgagcgcctgcagccgcgcatcgaccggctg
cccgaggccccggccagggcggagcccgtgtccccgccggccgcgccctcggacacggtg
gacgcgccagtgtcccccatcacggtggtggagcaggtccggcctcggcccgagcgccag
gaagctgcagatcgcgcccccgaggagctgccccggaggcggcggcctgagcgccaagag
tcggccgatcaacccgaggagacttcccggaggcggcggtcggagcggcaggagtctgtg
gagcacgagacggcgcacagcctgacgctgggccgctacgagcaaatggagaggcgaaga
gagcggcgggagcggcggctggagaggcaggaatccagcgaacaggagacgcccaccaga
ggagaactggtcaaggggaaggccaccctggctgacattgtggaacagctgcaggagaaa
gaggcaggcccggggctcccagctgcagtgccatcgctgccccagcctcgcgagcttccc
ccgggccgcctgcctaatgggcttgagccgcccgaacggacacctcggccggatcggccg
cgggctcgggaccggcccaagccccgacggcggccgaggcccagagagggtggcgagggc
gggggaagcaggcgctcacgctccgccccggcccagggaggctccgcccccgcgcctccg
cccccgcccactcacacggtgcagcacgagggcttcctgttgcgcaagcgcgagctggac
gccaaccgcaagtcatccaatcggtcgtgggtgagcctctactgtgtgctcagcaagggg
gagctaggcttttacaaggatgccaaaggcccagcctcagggggcacgcatggtggggag
ccactgctcagcctgcacaaggccaccagcgaggtggctaatgactacaagaaaaagaaa
cacgtcttcaagctccagacccaagatggcagcgagtatttgcttcaggctaaggatgag
gaggagatgaacggttggctggaggctgtggcggcttcggtggccgaacatgcagagatt
gcccgttggggccagacactccctaccacatcgtctacagatgagggcaatcccaagcga
gaagccggggagcgcagggccagtgggcgccggaagtga
DBGET
integrated database retrieval system
