Dipodomys spectabilis (banner-tailed kangaroo rat): 122097598
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Entry
122097598 CDS
T07891
Symbol
Itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04145
Phagosome
dsp04148
Efferocytosis
dsp04151
PI3K-Akt signaling pathway
dsp04510
Focal adhesion
dsp04512
ECM-receptor interaction
dsp04810
Regulation of actin cytoskeleton
dsp04820
Cytoskeleton in muscle cells
dsp05165
Human papillomavirus infection
dsp05205
Proteoglycans in cancer
dsp05410
Hypertrophic cardiomyopathy
dsp05412
Arrhythmogenic right ventricular cardiomyopathy
dsp05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122097598 (Itgb5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122097598 (Itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122097598 (Itgb5)
04148 Efferocytosis
122097598 (Itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122097598 (Itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122097598 (Itgb5)
04810 Regulation of actin cytoskeleton
122097598 (Itgb5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
122097598 (Itgb5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122097598 (Itgb5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
122097598 (Itgb5)
05412 Arrhythmogenic right ventricular cardiomyopathy
122097598 (Itgb5)
05414 Dilated cardiomyopathy
122097598 (Itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122097598 (Itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122097598 (Itgb5)
Membrane trafficking [BR:
dsp04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
122097598 (Itgb5)
Cell adhesion molecules [BR:
dsp04515
]
Integrins
Integrin beta subunits
122097598 (Itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
Integrin_b_cyt
EGF_2
I-EGF_1
vWA_SIBA-E
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
122097598
NCBI-ProteinID:
XP_042524128
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MPRGPAPFYACLLGLCALVPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEYFGSPRSV
TSRCDLKANLIRNGCDGEIESPASSTHIRRSLPLSNKGSSTMGSDVIQMMPQEVALNLRP
GDQTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDSIRNLGTKLAEEMRKLTSNFRLGFG
SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
RNRDAPEGGFDAILQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
HGDSKNIIQLIINAYSSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
TASFEVSVEARSCPSRHTEHKFALRPVGFRDSLQVAVTYSCTCGCSAGLEPDSIRCSGNG
TYVCGLCECNPSHLGTRCECQEGENQSGYQNLCREAEGKPLCSGRGECSCNQCSCFESEF
GRIYGPFCECDSFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRAKDGQ
ICSDRGHCICGQCQCTEPGAFGETCEKCPTCPDACSTKRDCVECLLLRPGKPDNQSCHHL
CKDEVITWADTIVKDDQEAVLCFYKTAKDCVMMFTYAELPSGKSNLTVLKEPECGSAPNT
VTILLAVVGSILLIGLALLAIWKLLVTIHDRREFAKFQSESSRARYEVALNPLYRKPIST
HTVDFTFNKFNKSYNGTVD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggggcccgcacccttctacgcctgcctcctggggctctgcgcgctcgtgccg
cgcctcgcaggactcaacatatgtaccagcggaagtgccacctcttgcgaagaatgtctg
ctaatccatccaaaatgtgcctggtgctccaaagagtactttggcagcccaaggtctgtc
acctcacggtgtgacttgaaggcaaacctcatccgaaacggctgtgatggtgaaatcgag
agcccggccagtagcacccatatccggcggagcctgccactcagcaacaaaggctccagc
accatgggctccgacgtcatccagatgatgccacaggaagttgccctaaaccttcggcct
ggtgaccagactactttccagctccaagtgcgccaggtggaagactaccctgtggatctg
tactacctgatggacctttccctctctatgaaggatgacttggacagcatccgcaacctg
ggcaccaagcttgccgaggagatgaggaagctcacgagcaacttccggttgggttttggg
tcctttgttgacaaggacatctctcctttttcctacacagcaccgaggtaccagacgaat
ccatgcattggttacaagttatttccaaactgcgtcccatcctttgggttccgccatctg
ctacctctcacagacagagtggacagcttcaatgaggaagttcggaaacagagggtgtcc
aggaaccgcgatgcccccgaggggggctttgatgcaatcctccaggctgctgtctgcaag
gagaagattggctggcggaaagatgcgttgcaccttctggtgttcacaacagatgatgtg
ccccacatcgcactggatggaaaactaggagggctggtgcagccccacgatggccagtgc
cacttgaatgaggccaatgaatacactgcatccaaccagatggactacccatcccttgcc
cttcttggagagaagttggcagagaataacatcaatctcatctttgctgtgacaaaaaac
cactatatgctctacaagaattttaccgctctgatacctggaaccacagtggagatttta
catggagactccaaaaatatcattcaactgattatcaatgcatacagtagtatccggtct
aaagtggagctgtctgtctgggaccagccagaagaccttaatctcttcttcactgctacc
tgccaagatggtgtatcctacccaggccagaggaaatgtgaaggtctgaagattggagac
acggcatcttttgaggtgtcagtggaggcccggagctgccctagcagacacacagagcac
aagttcgccctgcggcccgtggggttccgggacagcctgcaggtggcggtcacctacagc
tgcacgtgtggctgcagtgcggggctggagcccgacagcatcaggtgcagcgggaacggc
acttacgtctgcggcctgtgtgagtgcaaccccagccacctgggcaccaggtgtgagtgc
caggaaggagagaaccagagcgggtaccagaacctgtgccgggaggctgagggcaagccg
ctgtgtagcgggcgcggggaatgcagctgcaaccagtgctcctgctttgagagcgagttc
gggaggatctacgggcccttctgcgagtgtgacagcttctcctgtgccaggaacaagggc
gtcctctgctcaggccacggcgagtgtcactgtggagaatgcaagtgccatgcaggttac
attggagacaactgtaactgctcaacagatatcagcacatgccgggccaaggatgggcag
atctgcagtgatcgtgggcattgcatctgtgggcagtgccagtgcacggagcctggagcc
tttggggaaacatgtgagaagtgcccaacctgcccggatgcttgcagcacaaagagagat
tgtgtggagtgcctgctacttcggccggggaaacccgacaaccagtcctgccaccacctg
tgcaaggatgaggtgatcacctgggcggacaccatcgtgaaagatgaccaagaggccgtg
ctgtgcttctacaaaactgcgaaggattgcgtcatgatgttcacctacgccgagctgccc
agtgggaagtccaacctgactgtcctcaaagagccagagtgtggctcagcccccaacacc
gtcaccatcctgctggctgtggtgggcagcatcctcctgatagggcttgctctcctcgcc
atctggaagctgcttgtcaccatccatgaccgcagagagtttgccaagttccagagtgag
agctccagggctcgctacgaagtggccttgaatcccctgtacagaaagcccatctccaca
cacacagtggacttcaccttcaacaagttcaacaaatcctacaatggcacagtggactga
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integrated database retrieval system
