Dipodomys spectabilis (banner-tailed kangaroo rat): 122097659
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Entry
122097659 CDS
T07891
Symbol
Atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122097659 (Atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsp03000
]
122097659 (Atrx)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122097659 (Atrx)
Transcription factors [BR:
dsp03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
122097659 (Atrx)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122097659 (Atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122097659
NCBI-ProteinID:
XP_042524197
LinkDB
All DBs
Position
Unknown
AA seq
2482 aa
AA seq
DB search
MTAEPTSESKLNTLVQKLHDFLAHSSEESEETNSPPRLLTNQNIDKARISGNNSDMMENN
KEEGTGSSEKFRSSGSSRSKRKPSIVTKYVESDDEKPLDESINEEVSNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVTCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKVD
NEKSSKICDHTPKFSPKKISSSCNGEEKKLDDSCSGSITYSYSALIVPKEMIKKAKKLIE
TTANMNSSFIKFLKQSEENSEISSTLKLRQLKAFKSVLADIKKAHIALEEDLNLEIEALD
VVHKEEYTKELKITDAKCETKVQKGEKPCTLEKREFSKSEARPSRKQVDGEGHTDPSVPT
EEQRASKSTSGEHRKSDGKDEPQYEPANTSEDLDMDIVSVPSSVPEDIFDNLETAMEVQN
SADHRGDGTSRTEQELETSSVKLNMPKDNKGGSKSKTTSAKVTKELYVKLTPVSLSNSPK
KGADSQEVPQDKDGSKGSALNLKSEKCGPGQENSDNEHVEENEVPLLLEESDLRRSPRVK
TTPLRRPTETNLPSSNSDEESNETMKEKQKLLGPVRKKDKRNSSDSAIDNPKPNKLPKSK
PSEIVDQNSDSDEMIAILKQASRMSPSSSDTDINETHTNHKTLYDLKTQTGKDEKGKRKR
KSSSSGSDFDIKKGKSAKSSIIAKKKRQNQSESSNYDSELEKEIKSMSKITAVRTTKKRV
PNKKDYDSSEDEKRSKKGMAKQRPKSVKNTPGGSSDDAERKQERKNSCPNEKDKTVDSRD
QLSKKQQPSVSFDGADKSSPGKEESLNSLEDKKGAKTKEKSKHLKAKTCKKAPIGLSDAA
EKVHRKEHSDELSEDDKTQNKKEMEEKEKKTMDSKKTVLKMEQQYESSSDGTEKSLEGEE
VDNFPKDIKPNKDDTSDGEKKGRKAKDKMSKKKESSDSVEKLPEKGDSCDSSEDRNTKSR
VSTREKRKCRLPLKAPRKSQECSSSDEKYSTKEDGCDSSDKKQRRIELRERRNLNSKRNT
KGIPSGSSSSDAEESSEDSKKLKKPRTSAKKKAGSIKEKKRNSLGASTKRKQMEITSSSS
DIGDDGQNSLGEGSSDEQKIKPVTENLVLSSSHSGFCQSSGDEAISKSVPVTVDDDDDDN
DPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEEKKRNGKQLEVNPGDEDTKNPVNSESD
SDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEQKEAKIRSRRKVSSEDSEDTDFQ
ESGVSEAVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSHSEEE
GKEEEEDEDEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAERE
REREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFM
WDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTA
LNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQ
GRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPL
QNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEML
AGCVQRKDYTALTKFLPPKHEYVLAVRMTAIQCKLYQYYLDHLTGVGNNNEGGRGKAGAK
LFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDEYTKKK
KTKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNLDDTGNNPSGSLKLDESKATS
ASNPSSPAPDWYKDFVTDADAEILEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLI
EDFLELASREKTEDRDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRG
RLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGT
MEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPM
LPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFN
IPTGTNLPPVAFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPL
EDIISSVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILM
NRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRGMYQSVAGGMQPP
PLQRAPPPMRSKNPGPSQGKSM
NT seq
7449 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagcccacgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
tttctggcacactcctcagaggaatcagaagaaacaaattctcctcctcgacttttgaca
aatcaaaatatagataaagcccgtatttctggaaataattctgatatgatggaaaataat
aaggaagagggaactggctcttcagaaaaattcagatcttcaggatcatcgagatcaaaa
aggaaaccttcaattgtaacaaaatatgtagaatcagatgatgaaaaacctctggatgaa
agtataaatgaagaagtttctaatgaaaattcagaaaatgatattactatgcaaagcttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatgggcttcatgggatcgtgacctgcacagcttgtggacaacaggtcaatcatttt
caaaaagattccatttacagacatccttcgctgcaagtccttatttgtaagaattgcttt
aagtattacatgagtgatgatattagccgtgactcagatggaatggatgaacaatgtaga
tggtgtgctgaaggtgggaacttgatttgttgcgacttttgccataatgccttctgtaag
aaatgcattctgcgcaatcttggtcgaaaggagttatctacaataatggatgaaaacaac
cagtggtattgctacatttgtcatcctgaacctttgttggacttggtcactgcatgcaac
agcgtatttgagaatttagagcagttgttgcaacaaaataagaagaaaataaaagttgac
aatgaaaagagtagtaaaatatgtgatcacacacccaaattttctccaaagaagattagt
tccagttgtaatggagaagaaaagaaattagatgattcatgttctggttctataacctac
agttattcagcactaatagtgcccaaagaaatgattaagaaggcaaaaaaactgattgag
accacagccaacatgaactctagttttattaagtttttgaagcagagtgaagaaaattca
gaaatcagttctactctgaaattacgtcagcttaaggcttttaaatctgtgttggcagat
atcaagaaggctcacattgcattagaagaagatttgaatttggaaattgaagctttggat
gtggtacacaaagaggaatataccaaagagcttaaaatcacagatgctaagtgtgaaaca
aaagtacaaaaaggagaaaaaccctgtactttggaaaagagagagttttccaagtcagaa
gctaggccttcaagaaagcaggtagatggtgagggacacacagatccgagtgttccaaca
gaggagcagagggcaagtaaaagtactagtggtgaacataggaaatccgatgggaaagat
gaaccgcagtatgaacctgccaacacttcagaagacttagacatggacattgtatctgtt
ccttcctcagttccagaagacatttttgataatcttgagactgctatggaagttcagaat
tcagctgatcatcgtggggatggtaccagtagaacggagcaagagctagagacttcatct
gtaaaattaaatatgccaaaagacaacaaaggaggtagtaagtcaaaaactacctcagct
aaagtaacaaaagaattatatgtgaagctcacccctgtttcactttctaattccccaaag
aagggtgctgatagtcaggaagttccacaagataaagatggctctaaaggttctgcactg
aacctaaaatctgagaaatgtggacctggacaggaaaacagtgataatgagcatgttgaa
gaaaatgaagttcctttacttttagaggaatctgatcttcgaagatcgccccgtgtgaag
accacacccttgaggcgaccaacagaaaccaatcttccatcatccaattcagatgaagaa
agtaatgaaaccatgaaggagaaacaaaaattattaggtccagtaagaaaaaaggataag
agaaattcttctgacagtgctattgataatcctaaacctaacaaattacctaaatcaaag
ccgtcagagattgtagatcaaaattccgattctgatgaaatgatagcaatcctgaaacag
gcaagcagaatgagtcccagttcttcagatactgacattaatgaaactcatacaaatcat
aagactctgtatgacttaaaaactcaaacagggaaagatgagaaaggcaaaagaaaacgg
aaaagttcttcttctggctccgattttgatattaaaaaaggcaagtcagctaaaagctct
ataattgctaaaaagaaacgtcaaaaccagtctgagtcttcaaattatgactcagaatta
gagaaagagataaaaagcatgagtaagattacggctgtcagaaccaccaaaaaaagagtt
cccaataaaaaagactatgattcttctgaagatgaaaaacgtagtaaaaagggaatggcc
aaacaaaggccaaaaagtgtgaagaataccccagggggatcatctgatgatgctgaaagg
aaacaagagagaaagaattcctgtcctaatgagaaagacaagactgtggactcaagagat
caactttctaagaagcagcagcccagtgtttcctttgatggtgcagacaaatcatctcct
gggaaagaggagagtttaaattctctggaagacaaaaaaggtgctaaaactaaagaaaag
agtaagcatctgaaagctaaaacatgcaaaaaggcacccattggcttatctgatgctgct
gagaaagtccacaggaaagagcacagtgatgaactctctgaagatgataagacacagaac
aaaaaggaaatggaagaaaaagaaaagaaaactatggactcaaagaagacagtattgaag
atggaacagcagtatgagtcatcctctgatggcactgagaaatcacttgagggcgaagaa
gttgataattttcctaaggatataaaaccaaataaggatgacacaagtgatggagaaaag
aaaggtagaaaagcaaaagataaaatgtccaaaaagaaagaatcatctgacagtgtcgag
aaattgccagagaaaggagacagttgtgactcttcagaagacagaaatacaaagagtaga
gtatctactagagagaagagaaaatgcaggttacccctaaaggccccacggaagagtcaa
gagtgttcatcatctgatgagaaatattccacgaaagaagatggttgtgactcttcggat
aagaagcagagaagaatagaattgcgagagagaagaaatttaaattccaagagaaatacc
aagggaataccaagtggctcatcgtcttctgatgctgaggaaagttctgaagacagtaaa
aagctgaagaagccaagaacttcagctaaaaagaaggcaggcagtatcaaggagaaaaag
agaaactccctaggagcaagtactaaaaggaagcaaatggagattacttcctcatcttca
gatataggagatgatggtcagaattctcttggtgaggggagcagtgatgaacagaaaatt
aagcctgtgactgagaatttagtcctgtcttcttcccacagtggattttgccaatcttca
ggagatgaagccatatctaaatcagtgcctgtcacagtggatgatgacgatgacgacaat
gaccctgagaatagaattgccaagaagatgcttttagaagaaattaaagccaatctttcc
tctgatgaggatgggtcttcagatgatgaaccagaagaagagaaaaaaagaaatggaaaa
caacttgaagtcaatccaggagatgaagacacaaaaaatccagtcaattctgaatcagat
tcagattctgaagaatctaagaagccaagatacagacataggcttttgaggcacaagctg
actgtgagtgatggagaatctggagaagaaaaaaagacaaagcctaaagagcaaaaagaa
gccaaaattcgaagtagaaggaaggtgagcagtgaagactcagaagatactgattttcag
gaatcaggagttagtgaagcagttagtgaatctgaagatgaacaacggcctagaacaagg
tctgcaaagaaagcagaattggaagaaaatcagaggagttataaacaaaaaaagaaaagg
cgacgcattaaggttcaagaagactcatccagtgaaaacaagagccattctgaggaagaa
ggaaaggaagaagaggaggatgaagatgaggaggaagaggatgaaaatgatgattctaag
tctcctggaaaaggcagaaagaaaatccggaagattcttaaggatgacaaactaagaaca
gaaacccaaaatgctcttaaagaagaggaagagagacggaagcgtattgctgagagggag
cgtgagcgagaaaaattgagagaagtcatagaaattgaagatgcttcacccaccaagtgt
ccaataacaaccaagttggttttagatgaagatgaagaaaccaaagaacctttagtgcag
gttcatagaaacatggttatcaaattgaaaccccaccaagtagatggtgtccagtttatg
tgggattgttgctgtgagtctgtgaagaaaacaaagaagtctccaggttcagggtgcatt
cttgcccactgcatgggccttggtaagactttacaggtggtaagttttcttcacacagtc
ctcctgtgtgacaaattggatttcagtacagctttagtggtttgtccacttaataccgct
ttgaattggatgaatgaatttgagaagtggcaggagggattaaaagatgatgaaaagctt
gaggtctctgagttagccactgtgaaacgtcctcaggagagaagttacatgcttcagagg
tggcaagaagatggtggtgtgatgatcatagggtatgagatgtacagaaatcttgctcaa
ggaaggaatgtaaagagtcggaaactgaaagaaatatttaataaagctctagttgatcca
ggtcctgactttgttgtttgtgatgaaggccatattcttaaaaacgaagcatctgctgtt
tccaaagctatgaattctatacgatcaaggagaaggattattttaacaggaactccactt
caaaataacctgattgagtatcattgcatggttaactttatcaaggaaaatttgcttgga
tccattaaggagttcaggaatagattcataaatccaatccaaaatggtcagtgtgcagat
tctaccatggtagacgtcagagtgatgaaaaaacgtgctcatattctctatgagatgtta
gctggctgtgttcagaggaaagattatacagcattaacaaaatttttacctccaaaacat
gagtatgtgctggctgtgagaatgacagctattcagtgcaagctttaccagtactactta
gatcacctaacaggtgtagggaataacaatgaaggtggcagaggaaaggcaggtgcaaaa
cttttccaagattttcagatgttaagtcgaatctggactcatccttggtgtctgcaactg
gactacattagcaaagaaaataagggatattttgatgaagatagtatggatgaattcata
gcttcggattctgatgaaacttccatgagtctaagctctgatgagtataccaaaaaaaag
aaaacgaaggggaagaaggggaagaaagacagtagctcaagtggtagtggcagtgacaat
gatgttgaagtgattaaagtctggaattcccggtcgagaggtggtggcgaagggaatctg
gatgacaccggaaacaacccctctggatctttaaagctggacgaaagtaaagctacgtca
gcttctaatccaagcagcccagctccagactggtacaaagattttgtaacagatgctgat
gctgagattttagagcattctgggaaaatggtacttctctttgaaatccttcgaatggca
gaagaaattggggataaagtacttgtgtttagccagtctctcatatctctggacttgatt
gaagatttccttgagttggccagtcgggagaaaacagaagatagagataaacctcttatt
tataaaggtgaagggaagtggctccgcaatatagactactaccgtttagatggctctacc
actgcacagtcacgcaagaagtgggctgaagagttcaatgatgaaaccaatgtgagaggg
cgattatttatcatatccaccaaagcaggatctcttggaattaatctggtagctgctaat
cgagtaattatattcgatgcttcttggaatccatcctatgatatccagagtatattcaga
gtttatcgctttggacaaacaaagcctgtatatgtatataggttcttagctcagggaacc
atggaggataagatttatgaccggcaggtaactaagcaatctctgtctttccgagttgtg
gatcagcagcaggttgagcggcattttaccatgaatgagcttactgaactttatactttt
gagcctgacttattagatgaccctaattctgaaaagaagaagaagagggacactcccatg
ctgccaaaggataccatacttgcagaacttcttcaaatacataaagaacacattgtagga
tatcatgaacatgactctctgttggaccacaaagaagaagaagagttgactgaagaagaa
agaaaagcagcttgggctgaatatgaggcagaaaagaagggactgaccatgcgtttcaac
ataccaactgggaccaatttaccccctgttgctttcaactctcaaactccttatattcct
ttcaatctgggagccctgtcagcaatgagtaaccaacagctggaggaccttattaatcaa
ggaagagaaaaagttgtggaagcaaccaacagtgtgacagcagtgaggattcagcctctt
gaagatatcatttcatctgtatggaaggaaaacatgaatctctctgaggcccaagtgcag
gcattagccctgagtagacaagccagccaggagcttgatgtgaagcggagggaagcaatc
tacaatgacgtattgacaaaacaacagatgttaatcagctgcgtccagcgaatacttatg
aacagaaggcttcagcagcagtacaatcaacagcagcaacaacaaatgacttaccagcaa
gcgacactgggccacctcatgatgccaaagcccccaaatttaataatgaatccttccaat
taccagcagattgatatgagaggaatgtatcagtcggtggccggtgggatgcagccccca
ccacttcagcgtgccccaccccccatgaggagcaaaaacccaggaccttcccaagggaaa
tcaatgtga
DBGET
integrated database retrieval system
