Dipodomys spectabilis (banner-tailed kangaroo rat): 122098180
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Entry
122098180 CDS
T07891
Name
(RefSeq) protocadherin Fat 4-like
KO
K16669
protocadherin Fat 4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
122098180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122098180
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Cadherin related
122098180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
EGF
Cadherin_2
hEGF
Cadherin_4
EGF_TEN
EGF_CA
Fibulin_C
EGF_3
cEGF
EGF_2
SusE
CRA
Rib_recp_KP_reg
Motif
Other DBs
NCBI-GeneID:
122098180
NCBI-ProteinID:
XP_042524607
LinkDB
All DBs
Position
Unknown
AA seq
2671 aa
AA seq
DB search
LRGQPTAFSPNMNAVWPSPQNESANIVFMERSPALTGTGTINVIIDDINDNVPTFASKMY
FTEISEDAPTGTDVLLVNASDADASTNAVISYSIMGGDAQFTINPSTGQIITSALLDRET
KDNYTLVVVASDAGSPESLSSSTSVLVTVADVNDNPPRFQHHPYVTHIPSPAPPGAFVFA
VTVTDADVGPNSELHYSLSGGHSEKFRIDPLRGAITTAGSLSGVSEVTFSVHVRDGGSFP
RADSTTVTVRFANKADFPKVRAKEQALVFPENQPVGTLATTVTGSSPRGDALSYYIASGN
LGGAFQIDPLTGQVSIRRPLDFERTQRYVVWIEARDAGFPPFSSYEKLDITVLDVNDNAP
TFREDPFAAAVLENLSPRTVLTVSAVDRDSGPNSQLGYEIVDGNAENSFSIHHATGEIRS
TRPLDREKTPRYVLTVRSSDKGSPSRSTSVRVVITVLDENDNAPKFSQIFTAHVSENSPL
GFTVTRVTTSDEDIGVNAVSRYSLTDQSLPFSINPSTGDIVVSRPLDREDTDRYRIRVSA
HDSGWTVSTDVAIFVTDVNDNAPRFGRPSYYLDCPELTDVGAGVARVSAADPDEGANGQV
VYFIKSQSEYFRINATTGEIFNKQALKYQNVSGIGNVNVNRHSFVVTASDRGAPALLSET
TVTIRVVDSNDNAPRFPQDRYFTPVTKTARVGARLIQVTAVDDKDFGLNSQVEYFMSDHS
RAGRFTMDRDTGWISVASSLISDLNQDFLITVTAKDKGNPPLSSQATVQITVTEENYHTP
EFSQSHVTVTVPESYGVGGVIRTLSARDGDAAMNGAIQYGISSGNEEGTFAINSSTGVLT
LAKALDYELCRKHELTVSAADGGWVVRTGFCRVTVHVADVNDNSPAFVPEEYFLTVLENA
PSGTTVVHLNATDADAGMNAVVAYSVQASDSDLFIIDPNTGILTTQGFLDFETKQSYHLT
VKAFNVPDEDRCGFASITVQLEGTNEYVPRFVSKHYYFEVSEAAPRGTVVGEVFASDRDL
GSDGEVHYLIFGSSRKKGLQISKKTGQIYVSGLLDREKEERVSLKVLAKNAGSIRGADVD
EVTVNVTVLDANDPPVFSLDVYRVQVSEGVPVGTHVTFVSAFDADSTPSWSRFSYVLGPG
NEQGAFSVNPQTGQITVTAELDREARPVYNLTVLAVDSGTPPATGSAALLVTLEDINDNG
PLLAISEGEVTENQRPGTLVLTLRSTDPDLPPNQGPFTYHLLSTGPATNYFSLSSAGVLS
TTREIDREQIATFRLSVVTRDSGIPQMSSTGTVRITVRDQNDNPSQPRALDIFVHYFGKV
FPGGILGSVKPQDPDVLDSFRCTLTSGLTGLFSIPAGACELSAQPRSSDGAFDLTVLSSD
GLHSAVTSSVRVLFSGFSNATVDNSILLRVAVPTVRDFLTNHYVSFLRTAGSQLTGLGTA
VQLYGAYEENNRTFLLAAVKRNSNQYVSASGVATFFESIQEVLLRQSGVRIESVDHDACA
QGPCQNGGSCIRRLAVSPDLQSRESLPVILVANEPLQPFFCRCLPGYAGNWCETDIDECL
PAPCHNGGTCHNLVGGFSCSCPEGFTGRACERDINECLPSPCKNGAICQNFPGGFNCVCK
TGYTGKMCESSVNYCECNPCFNGGSCQSGMDTYYCHCPFGVFGKHCELNSYGFEELSYME
FPSLDPNNNYIYVKFATIKSHALLLYNYDNQTGERAEFLALEIAEERLRFSYNLGSGTYK
LTTMKKVSDGHFHTVIARRAGMAASLTVDSCSENQEPGYCTVSNVAVSDDWTLDVQPNRV
TVGGLRSLEPILQRPGHVESHDFVGCIMEFAVNGRPLEPSQALAVHGLLDQCPRLEGACT
RTPCQHGGTCVDHWSWQQCRCREGLAGKYCEKSITPDTALSLEGKGRLDYHMSQNEKREH
LLRQSLRGAPVEPYGVNSLEVKFRTRSENGILIHIQESSNYTTVKIKNGKVHFTSDAGIA
GKVERNIPEVYVADGHWHTFLIGKNGSATVLSIDRMYSRDILHPTQDFGGLDVLTISLGG
IPPNQAHRDAQTGLSGCIAWVLYGGESLPFSGKHSLASISKTDPSVKIGCRGPNICASNP
CWGDLLCLNQWYAYKCVPPGDCASHPCQNGGSCEPGLVSDFTCSCPESHTGRTCETVVAC
LGILCPQGKVCKAGSHGGHVCVLSPSPEEISLPLWAVPAIVGSCATVLAFLVLSLIVCNQ
CRGKKGKSPKQDKKPKEKKKKKKKKKGSENVAFDDPDNIPSYADDLTVRKQPEGNPKPDI
IERENPYLIYDETGLPHGAETVPSAPLASPEQEIEHYDIDNASSIAPSDADIIQHYKQFR
SHTPKFSIQRHSPLGFARQSPMPLGASSLTYQPPYGPGLRSGSLSHSACPTPNPLSRHSP
APFSKSSTFYSNSPARELHLPLRDGNTLEMHDTCQPGLFNYATRLGRRSKSPQAMVAHGS
RPGSRLKQPIGQIPLDSSPPVGLSIEEVERLNTPRPRNPSICSADHGRSSSEEDCRRPLS
RTRNPADGIPAPESSSDSDSHESFTCSEMEYDREKPMAYMSRVPKLSQVNESDADDEDNY
GARLKPRRFHGRRAEGGPAGPQAAAAGDGTLRPGQPAGGFSWDSLLSWGPGFGHYADVFI
DLASLPEKAAGKEEAGAAKPGPAEGEAEQRA
NT seq
8016 nt
NT seq
+upstream
nt +downstream
nt
ttacgaggacagcccacagcattctcgccaaatatgaatgcagtctggccttcaccacag
aatgaatcggctaacattgtgtttatggagagatcccctgccctgactggaactggaaca
atcaatgtcatcatagatgacatcaatgacaatgtccccacttttgccagcaaaatgtat
ttcacagagatttctgaagatgcacccactggaaccgatgtgttgttggtaaatgcttca
gatgcagatgcatcaacaaatgcagtcataagttacagcatcatgggtggagacgctcag
ttcaccatcaacccatccacaggacaaatcatcaccagtgcattgctagacagggaaacc
aaagataactatactttagtggtggtcgccagtgatgccgggtccccagagtctctctcc
agttccaccagtgtgctggtcactgtggccgatgtcaatgataatccaccaagatttcag
caccatccatatgtcacccacatcccatctcctgctccaccaggggcctttgtctttgcg
gtgacagtcactgatgccgacgtgggacctaattcagagctgcattattccctctcaggt
ggacactctgagaagttccgcattgaccccctgcgcggcgccatcaccacagctgggtcg
ctgagtggggtctctgaggtgaccttctctgtgcacgtgagagatggcggctcgttccct
agggccgactccaccacggtgaccgtcaggtttgccaacaaagcagatttccccaaagtt
cgagccaaagaacaggcactggtgtttcccgagaaccagccggtgggcacgctggccacc
acagtcaccgggtcgtccccgcggggtgatgcactgtcctactacatcgccagtggaaac
ctgggtggcgccttccagatcgacccgctgaccggccaggtgtccatccggcggccccta
gacttcgagcggacacagaggtacgtggtgtggatagaggctcgagacgcgggcttcccg
cccttctcttcttatgagaaactggacatcacggtcttggatgttaacgacaatgccccc
acctttcgagaagacccctttgcagcggctgtcctcgaaaacctttctcctcggacagta
ctcaccgtctctgcggtggacagggacagtgggccaaacagccagttaggatatgagatc
gtggacgggaacgcggaaaacagcttcagtatccaccacgccaccggggagatcagaagc
acccgacccctagaccgagaaaaaaccccccgttacgttctcaccgtgagatcctccgat
aagggctctccttcccggagcacctcggtgagagtcgtcatcaccgtgctggatgaaaac
gacaatgcccccaagttttcccagatcttcacagcccacgtttcggaaaactcgcctctg
ggattcactgtgactcgggtcacgacgtccgacgaggacatcggcgtcaacgcggtcagc
aggtactccctcacggaccagagcctcccattctccatcaaccccagcaccggcgacatc
gtggtcagcaggcctctagacagggaggacacggaccgctaccgaatccgcgtctcggcg
cacgattccgggtggaccgtgagcacggacgtggccatcttcgtgacagatgtgaacgac
aatgccccgcgcttcggcaggccctcctactacctggactgccccgaactgacggacgtg
ggtgccggcgtggcgcgcgtctcggctgccgatccggacgaaggcgccaatggacaagtg
gtttacttcattaagtctcagtctgagtacttcaggattaacgccaccaccggggagatc
ttcaacaagcaggccttaaaataccagaacgtcagcggcatcggaaacgtgaacgtcaac
agacacagtttcgtggtgaccgcgtcggaccggggcgcgccggccctgctcagcgagacc
accgtcaccatccgcgtcgtggacagcaacgacaacgcgccgcgcttcccccaagaccgt
tacttcaccccggtcaccaaaaccgcgcgtgtgggcgccaggctgatccaggtcactgcg
gtggatgacaaggactttgggctgaactcccaggtggagtatttcatgtctgaccacagt
agggcggggaggtttacgatggacagagacacagggtggatttctgtcgcgtcctcgctg
atttccgacttgaaccaggactttctgatcacagtcaccgcgaaggataaaggaaaccct
cctctttcttcccaagctacggtgcaaataactgtcactgaagaaaactaccacacacct
gaattctcccagagccacgtgacggtcaccgttcccgagagctacggcgtcgggggcgtc
atcaggacgctgtcggccagggacggggacgcggccatgaacggcgccatccagtacggc
atctcctccgggaacgaagaaggcacttttgccatcaactcatccacaggggtgctgacc
ttagccaaagccctcgattacgagctgtgccggaaacatgagctgaccgtcagcgccgcg
gacggaggctgggttgtcagaaccggcttctgccgtgtgaccgtccacgtggcagacgtg
aatgacaattctccggcttttgttcccgaagagtatttccttactgttctggaaaatgcc
ccgagtgggacgacagtggtccacctgaacgccacggacgcggacgctgggatgaacgcc
gtggtggcgtacagtgtgcaggcctcggacagcgacctcttcatcatcgaccccaacacc
ggcatcctcaccacccagggcttcctggacttcgagaccaagcagagttaccacctcact
gtgaaggccttcaacgtgccggatgaggatcggtgtggcttcgcctccatcaccgtccag
ctggagggaaccaacgaatacgtgccgcgcttcgtctccaaacactactactttgaagtc
tccgaggcggcgccccggggcaccgtggtgggagaggtctttgccagtgaccgggacctg
ggctccgacggcgaggtccattatttaatttttggcagcagtcgaaagaaaggcttgcag
attagtaagaagacgggacagatctacgtgtctgggcttctggacagagagaaagaagaa
agggtgtctttgaaggtgctggccaagaacgccggcagcatccggggtgcggacgtggac
gaggtgacggtgaacgtcacggtgctggacgccaatgacccacccgtgttcagcctggac
gtgtaccgggtgcaggtgagtgagggcgtcccggtaggtacgcatgtcacctttgtcagt
gccttcgacgctgactccacgcccagctggagccgcttctcctatgtcctggggccaggg
aacgagcagggcgccttctccgtgaacccccagaccgggcagatcacggtgacggccgag
ctggaccgtgaagcccgccccgtgtacaacctcacggtcctggccgtggactcggggaca
ccgccggccacgggcagtgccgccctgctggtcaccctggaggacatcaatgataacggg
ccgctgctggccatcagcgagggggaggtgacggaaaaccagcggccgggcaccctggtg
ctcaccctccgctccactgaccccgacctcccgcccaaccagggccccttcacctaccac
ctcctgagcacgggccccgccaccaactacttcagcctgagctcagctggggtcctgagt
accactagggagatcgaccgagagcagattgccaccttccgcctgtcggtggtcacccgg
gactcgggcatcccacagatgtcctccacagggacagtgcgcatcaccgtccgggaccag
aacgacaacccctcccagccccgtgccctggacatcttcgtccactacttcgggaaggtg
tttccgggcgggatcctgggctcggtgaagccgcaggaccccgacgtgctggacagcttc
cgctgcacgctgacctcggggctcacgggcctcttcagcatccccgcaggtgcctgcgag
ctgagcgcccagccgcgctcctccgacggggccttcgacctgacggtgctcagcagtgac
ggcctgcacagcgcggtgaccagcagtgtccgtgtgctcttctccggcttctctaacgcc
acggtggacaacagcatcttgctccgcgtggccgtgcccaccgtcagggatttcctgacg
aaccattacgtgtctttcctgcgcaccgccggctcgcagctgacaggcctgggaaccgct
gtccagctctacggggcctacgaagaaaacaacaggacatttctcctggcagcggtgaag
agaaacagtaaccagtatgtcagtgccagcggcgttgccaccttctttgagagcatccag
gaggtgctcctgcggcagagcggggtgaggatcgagtctgtggatcatgacgcctgcgcc
caggggccctgccagaacgggggcagctgcatccggagactggccgtgagccctgacctg
cagagccgggagagcctgcccgtcatcctcgtggcgaacgagcccctccagccgttcttc
tgcaggtgtctgccggggtacgccggcaactggtgcgagacggacatcgacgagtgcctg
ccggccccgtgccacaatggtggaacctgtcacaacttggtggggggcttttcctgcagc
tgtccggagggcttcaccgggagggcctgtgagagagatatcaacgaatgtctgcccagc
ccttgcaaaaacggggccatctgccagaactttccaggaggcttcaactgtgtttgcaaa
actggatatacagggaaaatgtgtgaatcatcagtcaattactgtgaatgcaacccgtgc
ttcaatggtggctcttgccaaagtggcatggatacatactactgccattgtccgtttggt
gtctttggcaaacactgtgagctgaacagctatggctttgaggagctgtcatacatggaa
tttccaagcttggatcccaataacaactatatttatgtcaaatttgccaccatcaaaagt
catgcattattgctttacaactatgacaaccagactggtgagagggctgagtttttggcc
cttgaaattgctgaggaaagactacggttctcttataacttaggtagtggtacatacaag
ctcaccaccatgaagaaagtgtcagatggacattttcacactgtgattgcccggagagca
ggaatggcagcctccctaactgtagactcctgctctgagaaccaggaaccagggtactgc
accgtcagcaacgtggctgtctcagatgactggaccctggatgtgcagcccaaccgcgtg
accgtgggtggcctccgatccctggagcccatcctgcagaggcctgggcatgtggaaagc
catgattttgtgggttgcatcatggagtttgcagtcaatgggaggcctctggagcccagc
caggcattggcagtccacggcctcctagaccaatgccccagactagaaggagcctgcaca
cgcaccccttgccagcatggtggcacctgcgtggaccactggtcctggcagcagtgtcgc
tgcagagagggcctggctgggaaatactgtgagaaatctattactccagacacagccttg
tctttagaaggcaaaggacgtctggattaccacatgagccagaatgagaagagggagcat
ctgctgaggcagagcctgcgaggggccccagtggaaccttatggtgtgaacagtctggaa
gtcaaattcaggacaagaagtgagaatggaattttaatccacatccaagaaagcagcaac
tacacaacagttaagatcaagaatgggaaagtacatttcacttctgatgcagggattgct
gggaaagtggagagaaatattcctgaagtttatgttgcggatggacactggcatactttc
ttaattgggaagaatggaagtgccacggtattgtccattgacagaatgtatagcagagat
atccttcaccccactcaggattttggtggtctcgatgtgctcaccatatctcttggtgga
attccacccaaccaagctcacagagatgcccaaacagggctcagcggctgcattgcttgg
gtgttatatggaggtgaaagtctccctttcagcgggaagcacagcttggcctccatctcg
aaaacagatccctcggtgaagatcggctgtcgcgggcccaacatctgtgccagcaacccc
tgctggggcgacctgctgtgcctgaaccagtggtatgcatacaagtgcgttcctcccggg
gactgcgcctcccacccatgccagaacgggggcagctgcgagcctggcctcgtctcggat
ttcacctgcagctgccctgagtcgcacacggggcggacctgtgagaccgtggtggcctgc
ctgggcatcctgtgcccccagggcaaagtgtgcaaggctggaagtcacggagggcacgtg
tgcgtgttgagccccagcccggaggagatctcgctccccctgtgggccgtgcccgccatc
gtgggcagttgcgccaccgtcctcgccttcttggtcctcagcctcatagtgtgcaatcag
tgccgagggaagaaaggcaagagtccaaagcaggacaagaaaccgaaggagaagaagaag
aagaaaaagaagaagaaaggcagcgagaacgtcgctttcgatgacccagacaacatccct
tcctacgcggacgacctgacagtgagaaagcagcccgaggggaaccccaagccggacatc
atcgagcgggagaacccctatctcatctacgacgagacggggctcccccacggtgcggag
accgtgcccagcgcgcccctggcctccccggagcaggagatcgagcactatgacatcgac
aatgccagcagcatcgcgccctcggacgccgacatcatccagcactacaagcagttccgc
agccacacgcccaagttctccatccagaggcacagcccgctgggcttcgcccggcagtcc
cccatgcccctgggcgccagcagcctcacctaccagcccccctacgggcccgggctgaga
agcggctcgctcagccactcggcttgtcccacccccaaccctctgtctcgacacagccca
gcgcctttctccaaatcatctactttctacagtaacagcccagccagggagctccatctt
cctctgagagatggaaacacgttggaaatgcacgacacctgccaacctggccttttcaac
tatgccacgaggctggggaggaggagcaagagtccgcaggccatggtggctcacggctcc
agaccggggagtcgcctcaagcagccgatcgggcagattccgctggactcctccccgccg
gtgggactctccatcgaagaggtggagaggctgaacaccccgcgcccgcggaaccccagc
atctgcagcgccgaccacgggaggtcctcgtcggaggaggactgccgacgcccgctgtcc
agaacccggaacccggccgacggtattccggctccggagtcttcctccgacagcgactcg
cacgagtccttcacctgctcggagatggagtacgaccgcgagaagccgatggcctacatg
tccagggtgcccaagctctcccaggtcaacgagtcggacgccgatgacgaggacaactac
ggcgccaggctgaagcctcggcggttccacgggcgccgggcggagggcggccccgcgggg
ccccaggcggcagccgcgggcgacggcacgctgaggccgggccagccggcgggcggcttc
agctgggacagcctcctgagctgggggcccggcttcggccactatgctgacgtcttcatc
gacttggcgtctctcccagaaaaggcggcgggcaaagaagaagccggggccgcgaagcct
ggccccgcggagggcgaggccgagcagcgcgcatga
DBGET
integrated database retrieval system
