Dipodomys spectabilis (banner-tailed kangaroo rat): 122098557
Help
Entry
122098557 CDS
T07891
Symbol
Ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsp03009
]
122098557 (Ddx55)
Enzymes [BR:
dsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122098557 (Ddx55)
Ribosome biogenesis [BR:
dsp03009
]
Eukaryotic type
Pre-60S particles
Helicases
122098557 (Ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
122098557
NCBI-ProteinID:
XP_042524967
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MENVTEGAWESLPVPLHPRVLGALRELGFPRMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPALEILLRREEKLKKRQVGAIIITPTRELAIQIDEVLSHFTKHFPQLSQILWIGG
RNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTRKTPS
RLENFYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVSGVQVLCIH
GKMKHKRNKIFLDFRKLHSGILVCTDVMARGIDIPEVHWVLQYDPPSIASAFVHRCGRTA
RIGHGGSALVFLLPMEESYTNFLAINQKCPLQEMSVQKNVANLLPDLKAMALADRAVFEK
GMRAFVSHVQAYAKHECNLIFRLKDLDFASLARGFALLKMPKMPELRGKQFPEFVPVDIN
TDTIPFKDKIREKQRQKLLEQQIKEKAENEGKRKFIKNKAWSKQKAKKERKKKMSAKRKK
EEGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKELLISSKGTMKTADLGVSDLEDEC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtgacggagggcgcctgggagtcgctgccggtgccgctgcaccctcgggtg
ctgggcgcgctgcgggagctgggcttcccgcgcatgacgccggtgcagtctgccaccatt
cctctgttcatgaaaaacaaagatgtggcagcagaggcggtcacaggtagtggcaaaaca
ctggcctttgtcatccctgccctggaaattcttctgagaagggaggaaaagttgaagaag
aggcaggtgggagccatcatcatcacccccacccgtgagctggccattcagatcgatgag
gtcttgtcacacttcaccaagcacttcccgcagctcagccagattctctggatcggaggc
aggaaccctggagaagatgtggagaggtttaagcagcatggtgggaacatcattgtggcg
actccaggccgcctagaggacatgttccggaggaaggctgagggcctggacctggccagc
tgcgtgcggtccctggatgtcctggtgcttgatgaagctgacagacttctggacatgggg
tttgaggcaagcataaacaccatcctggagttcttgccaaagcagaggagaacaggcctt
ttctccgccacacagacacaggaggtggagaacttggtgcgtgctggcctgcggaaccct
gtccgcatctcggtgaaggagaagggtgtggcggccagcagtacccggaagacgccctcc
cgcctggagaacttctacatggtatgtaaggcagatgaaaaattcaatcagctggtgcat
tttcttcgaaaccataagcaggagaaacatctggtcttcttcagcacctgcgcctgcgtg
gagtactatgggaaggctctggaggtgctggtgagcggtgtgcaggtcctgtgtattcat
ggcaagatgaagcacaagcgtaacaagatcttcctggacttccgaaagctgcacagtggg
attttggtctgcacagatgtgatggcccggggcatcgacattcccgaagtccactgggtc
ctgcagtacgaccctcccagcatcgccagtgcctttgtgcaccgctgcggccgcacagca
cgcatcggccatggcggcagtgccctggtgttcctgctgcccatggaagagtcgtacacc
aacttccttgccatcaaccagaagtgtcccctgcaggagatgagtgtgcagaagaacgtg
gccaacctgcttccagacctcaaggccatggccctggccgacagagctgtgtttgaaaag
ggcatgagagccttcgtgtcccacgtccaggcctacgccaaacacgagtgcaacctcatc
ttcaggctaaaggatcttgactttgccagccttgcccgaggttttgccttgctcaagatg
cccaagatgccagaactgaggggaaagcagtttccagagtttgtgcctgtggacattaat
acagacacaattccatttaaagataaaattagagaaaaacaaagacagaaactattggag
caacaaataaaggagaaagcagaaaatgagggaaaacgaaaattcataaaaaacaaagca
tggtccaaacagaaagccaaaaaggaaaggaagaaaaagatgagtgcaaaaaggaagaag
gaagagggctctgacattgaagatgaggacatggaggaacttcttaatgacacaaggctc
ttgaaaaagttaaaaaaaggcaaaatcactgaagaagaatttgagaaggagttgctgata
agcagcaaaggaacaatgaagaccgcagatttaggtgtctctgacttggaagatgagtgc
tga
DBGET
integrated database retrieval system
