Dipodomys spectabilis (banner-tailed kangaroo rat): 122099005
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Entry
122099005 CDS
T07891
Symbol
Rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03030
DNA replication
dsp03410
Base excision repair
dsp03420
Nucleotide excision repair
dsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122099005 (Rfc5)
03410 Base excision repair
122099005 (Rfc5)
03420 Nucleotide excision repair
122099005 (Rfc5)
03430 Mismatch repair
122099005 (Rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsp03032
]
122099005 (Rfc5)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122099005 (Rfc5)
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122099005 (Rfc5)
DNA replication proteins [BR:
dsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122099005 (Rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
122099005 (Rfc5)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122099005 (Rfc5)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122099005 (Rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
122099005 (Rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_22
AAA_11
AAA_24
AAA_assoc_2
AAA_14
RuvB_N
DEAD
ResIII
DUF815
AAA_5
AAA_19
PhoH
ATPase_2
TIP49
AAA_7
AAA_30
nSTAND3
TniB
DNAX_ATPase_lid
bpMoxR
Mg_chelatase
Thioredoxin_6
AAA_3
AAA_2
AAA_25
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
122099005
NCBI-ProteinID:
XP_042525491
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MEQQPQQPPPAVKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYGPPG
TGKTSTILACAKQLYKDKEFNSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVI
LDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMV
PRLEHVVQEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPL
KSDIANILDWMLNLDFTTAYRNIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRVHLLA
KMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagccgcagcagccgccgcccgctgtaaagatcaggaacctgccctgggtt
gagaaataccgaccacagacactgaatgatctcatttctcatcaggacattttgagtacc
attcagaaatttatcagtgaggatcgcctgccacacctacttctttacggcccgccaggg
acaggaaaaacatccaccatcctcgcctgtgctaagcagctatacaaagataaagaattc
aactccatggtcttagagctgaatgcttctgacgaccgaggcatagatatcgtgcgggga
ccaatcctgagctttgccagcaccaggacaatatttaagaaagggtttaaactcgtgatc
ctggacgaagccgacgccatgactcaggatgcccagaatgccttgcgacgagtgattgag
aagttcacagaaaataccagattttgtctcatctgcaactatctgtccaagatcatcccg
gccctgcagtcccgctgtaccaggttccgctttggacccctgacgccagaactcatggtc
ccccgcctggagcacgtggtacaagaggagaaagtggatataagtgaagatggaatgaaa
gcacttgtgactctgtccagtggagatatgcgcagggctctgaacatcctgcagagcacc
aacatggcctttgggaaggtgacagaggagactgtgtatacctgcacagggcacccacta
aagtcagacatcgccaacattctggactggatgttgaacctggacttcaccactgcctac
agaaatatcatggagttgaaaaccctgaagggcttggcgttacacgacatcctgacggag
gttcatctgttcgtgcacagagttgactttccatcttcggttcgagtacatttactggct
aaaatggcagacattgagtacagactctctgttggcaccagcgagaagattcagctgagt
tccctcattgctgcctttcaagtcacccgagacctgattgtggcagaggcgtag
DBGET
integrated database retrieval system
