Dipodomys spectabilis (banner-tailed kangaroo rat): 122099643
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Entry
122099643 CDS
T07891
Symbol
Ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
122099643 (Ptchd1)
Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
Other domain-containing proteins
Patched domain-containing proteins
122099643 (Ptchd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
122099643
NCBI-ProteinID:
XP_042526140
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHT
AVTKIQVPRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDMVAERWESSFCDTVRLF
QKSNSKVKMYPYTSSSLREDFQKTSRVSERYLVTSLILVITMAILCCSMQDCVRSKPWLG
LLGLVTISLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAILFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFFLTARFSEDTAEGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STGLTKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVFMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWITITVVSVEFGVIGFMTLWKVQLDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREDAECVEMADMGSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctcccggcttggccacttc
attgccagtcacccggtgttcttcgcctcggcaccggtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtggaagagagcgtggagcacctgctggcgccccagcac
agcctggccaagatcgagcgcaacctcgtcaacagcctcttcccggtcaaccgctccaag
caccggctctactcggacctgcagacccctgggcgctacggccgggtcatcgtcacctcc
ttccagaaagccaacatgctggaccagcatcacaccgacctgatcttaaagttgcatacc
gctgtgaccaagatccaggtgccaaggcctggttttaattacacgtttgcgcacatatgt
atcctgaataatgataagacttgcatcgtggatgacatagtacacgtcctggaagaacta
aagaatgcccgggccaccaatcggaccaattttgctatcacgtacccgatcactcactta
aaggatgggagggctgtgtacaacgggcaccagcttgggggtgtcaccgtacacagcaag
gatcgggtgaaatcggcggaggctattcagctcacctactacctgcagtcaatcaacagt
ctcaatgacatggtggctgagaggtgggagtccagtttctgtgacactgtcagactgttc
cagaaatccaacagcaaagtcaaaatgtacccgtacacatcctcgtcactgagggaagat
ttccagaagactagccgtgtgtcggaacgttacctggtcaccagcctgatcctggtgatc
accatggccatcctttgctgctccatgcaggactgtgtccgcagcaaaccctggctaggc
ctgcttggcttggtgaccataagcctggccacactcactgcagctggaatcatcaatctt
actggtggcaaatacaattccaccttcctgggagtccctttcgtcatgctaggtcatgga
ttatatgggacttttgaaatgttatcctcctggaggaaaactagagaagaccaacacgtg
aaagagcgaactgcagcagtctatgcagactccatgctctccttttctctcaccactgcc
atgtacctggtcacctttggcataggggccagccctttcacgaacattgaggcagccagg
attttctgctgcaattcctgtattgcaatcctcttcaactacctctatgtactctcgttt
tatggttccagcctggtgttcactggctacatagaaaacaattaccagcatagtatcttc
tgtaggaaagttccaaagcccgaggtattgcaggagaaaccagcatggtacaggtttttc
ctgacagccagattcagtgaggacacggctgaaggcgaggaagcaaacacttacgagagt
cacctattggtatgtttcctcaaacgctattactgtgactggataaccaacacctatgtc
aagccttttgtagttctcttttatcttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcaaccgccacacaaaccatcgag
tacactactgcccagcaaaagtactttagcaactacagtcccgtgattgggttttacatt
tatgagtccatagagtactggaacactagtgtccaagaagatgttctagaatataccaag
gggtttgtgcggatatcctggtttgaaagctatttaaattaccttcggaaactcaatgtc
tctactggcttgactaagaaaaatttcacagacatgttgaggaattccttcctgaaagcc
ccccaattttcacattttcaagaagacatcatcttctctaaaaagtataatgatgaggtt
gatgtagtggcctccagaatgtttttggtggccaagaccatggaaacgaacagagaagaa
ctttatgatctcttggagaccctgaggagactttcagtcacctccaaggtgaagttcatt
gtctttaatccgtcttttgtgttcatggatcgatatgcatcctctctgggagctcccctg
cacaattcctgcatcagtgctttgttcctgctcttcttctcggcattcctggtggcagac
tctctgattaacgtctggatcacgataacagttgtgtccgtggagttcggcgtgataggt
ttcatgacactatggaaagtacaactggactgcatttctgtgctatgcttgatttatgga
attaactatacaattgacaattgtgctccactgttatccacatttgttttgggcaaggat
ttcacaagaactaagtgggtaaaaaatgccctggaagtgcatggggtagctattttacag
agttacctctgctacattgttggtctgattcctctcgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcttgccaccctctaagaaaaaaaggaaagagaagaaa
aatcctgaaaaccgtgaggatgctgaatgcgtagaaatggcggatatgggtagtacccga
gtggttgaccaaattacaaccgtgtga
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