Dipodomys spectabilis (banner-tailed kangaroo rat): 122100301
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Entry
122100301 CDS
T07891
Symbol
Slc1a6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04082
Neuroactive ligand signaling
dsp04721
Synaptic vesicle cycle
dsp04724
Glutamatergic synapse
dsp05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122100301 (Slc1a6)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
122100301 (Slc1a6)
04721 Synaptic vesicle cycle
122100301 (Slc1a6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122100301 (Slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsp02000
]
122100301 (Slc1a6)
Transporters [BR:
dsp02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
122100301 (Slc1a6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
122100301
NCBI-ProteinID:
XP_042526588
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MSSHGNSLFLRESGPRLGRAGWLRRTREGLQRRALRLRLRLQTTTREHVRRFLRRNAFIL
LTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLD
NKATGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIETVPTADAFMD
LVRNMFPPNLVEACFKQFKTQYSTRVVTRTVVRTENGSEPGASAAPLSLADNESSVVENV
TRALGTLQEMLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLN
EAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGVLPL
IYFLVTHRNPFPFIGGLLQALLTAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGA
TVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVL
TSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQQELDLQEAELTLPSLG
KPYKSLMAQEKGASRGRGGHESAM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccacggcaacagcctgttcctgcgggagagcggcccgcgcctgggccgggcg
ggctggctgcggcgcacgcgcgagggcctgcagcggcgagcactgcgcctgcgcctgcgc
ctgcagaccaccacgcgcgagcacgtgcggcgcttcctgcgccggaacgccttcatcctg
ctcaccgtcagcgccgtcgtcattggagtcagcctggcattcgccctgcgtccataccag
ctcacttaccgccaaatcaaatacttctcctttcctggcgagcttctgatgaggatgctg
cagatgctggtcctgcctcttattgtctccagtctggtcacaggtatggcgtccttggac
aacaaggccacagggcggatggggatgcgggcagctgtgtactacatggtgacgacggtc
atcgcggtcttcatcggcatcctcatggtcaccatcatccaccctggcaagggctccaag
gaggggctgcaccgagagggccgcattgagaccgtccccacggccgacgccttcatggac
ttggtcagaaatatgtttccgcccaacctcgtggaggcctgcttcaaacagttcaagact
cagtatagcaccagggtggtcaccaggacggtggtgaggacggagaacgggtcggagccg
ggagcctcggcggcgcccctgtccctggcggacaacgagagcagcgtggtggagaacgtc
actcgggccctgggcaccctgcaggagatgctcagcttcgaggagaccgtgccggtgccc
ggctctgccaatggcatcaatgccctgggcctggtggtcttctctgtggctttcggcctg
gtcatcgggggcatgaaacacaagggccgcgtcctcagggactttttcgacagcctcaac
gaggccattatgaggctggtgggcatcattatctggtacgcgcccgtgggcatcctgttc
ctgatcgcggggaagattctggagatggaagacatggcggtcctgggcggtcagctgggc
atgtacacgctgacggtcatcgtgggcctgttcctgcacgccggcggcgtcctgcccctc
atctacttccttgtcacccaccggaacccctttcccttcatcgggggcttgctgcaggcg
ctcctcaccgccatgggcacctcctccagctcggccactctgcccatcaccttccgctgc
ttggaggaaggcctgggcgtggaccgtcgcatcaccaggtttgtgctgcccgtgggtgcc
acggtcaacatggacggaaccgctctctacgaggccctggccgccatcttcatcgcccaa
gtcaacaactacgagctcaacttgggccagatcaccacgatcagcatcacggccacggcg
gccagcgtgggcgcggccggcatcccccaggcgggcctggtcaccatggtgatcgtgctc
acctccgtgggcctgcccaccgaggacatcacactcatcatcgctgtggactggtttctc
gaccggctccgcaccatgaccaacgtgctgggggactcgatcggcgcggccgtcatcgag
cacctgtcccagcaggagctggatctgcaggaggccgagctcacccttcccagcctgggc
aagccctacaagtcactcatggcacaggaaaaaggggcgtccaggggccgggggggtcac
gagagcgccatgtga
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