KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122100314
Entry
122100314         CDS       T07891                                 
Symbol
Nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dsp04990]
    122100314 (Nwd1)
Domain-containing proteins not elsewhere classified [BR:dsp04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   122100314 (Nwd1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_IFT140_1st AAA_16 Beta-prop_HPS5 Beta-prop_LRRK2 Beta-prop_RIG_2nd Beta-prop_Vps41 NBCH_WD40 AAA_22 NACHT Beta-prop_SCAP AAA nSTAND1 DUF4062
Other DBs
NCBI-GeneID: 122100314
NCBI-ProteinID: XP_042526610
LinkDB
Position
Unknown
AA seq 1576 aa
MDTEREALLLSAYPEVQAFCQRHGLGFEVVDLRWGVREADVSDYTMTELCLEELSRCQET
SIGPTFVALLGDRYGPCPVPGLIEEREWEALAGSLRARPRDLELVARRFQRDENAVPPTY
VLQEPDVGEARGPEEASLASVLQAGALEARRLGLLSQEQWHRYHRSVLEWELEVGVLRPG
AAARGVTVFLREIRDLDKHLLDECALLALDRLPDGCPDTGARGLLQRLKERLAEEHPEIM
QAHPLPWSRDLLNPKNKAHARYLRGLGEQFVASARLQILAGLGERGAGLGARGAPRDQAW
LFEELRVHQRRQAAEAAAPLCGRQELLARLGRRLRDGEQRPHPPLVLFGAPGVGKTALLC
ALAGGAPGLLGRKAVTALRVLGASGSSVDPGALPRSLALQLSLAFGLPPPPGPVLARRGR
LAQFLQALLHAAARRDCESLVLVLDDVDALDGLGPGRDPLPWLPARCPPRVHVVLSACSG
GRRRPRHALDALRAKIQDADAFVEVPPLAAGPGQDLVRGLLAAAGRALSPAQQAALWAWL
PDCGHPGRLRLAFEEARRWASFTVPAPLAGTAEEATHHLCARLEDAHGQLLVSHVLGYIA
ASRFGLSEAELKDVLSLDDELLCEAYRAWTPPSRRLLRFPPLLWVRLRRDLGLCLARRPA
DGGQLLTLAHRQLAEVVSVRYLSGPERAQRHSVLADFFSGAWSQGTKKLITLPLVGVPLS
LDRKVAPQPLWFSDSVANERRLQELPRHLLLAGRTRELRQDLLGNVSWLACRALSGGAEA
LLDDFDLCTQHLRCPEVGLIREAVRLSRPALELRGTEKSTLYTELLARLLFFSKSHPALV
GQLCQQAQSWLRACPHPVLVPLAGFLQPPGGPLQATLTGCHKGITAVAWSQEQRLLVLGT
HDGVVAMWDVEEECPVHFLPAHSGEVWCVRVFAQGARAVSASTDRTLRVWGLLSGQQQLS
IWDGGAANSTEPQTRSLHVDEAKQVLYLASGSKISAWALETAALLFRVLGEASDPWLCAA
WLAAPTRLLTVSRACVVSVWSAASGALQGKQRLSSVRGETPTCAAPLHKQGTVVAGFSNG
SVSLISSKGDRLLEKLPEAVGLVEVSEDGSLLAAGFGKSVRIFLADAQGFQRFLATDLRH
EDAVETAVFGPKNNLIVTASRDALIQVWSLSEQGALLGLLDGVGAPLGTLVRAGALVVGA
SRWSSTFRAWDVSRARQRGACAPFPDRTGLTAVSHNGSYVYFPGVGEKNQVTIWDLAEGE
ARGALDTSSEVRCLEVAEQTKLLFAGLVSGAVLVFPLNSTQDVLCIPPPEARKAVTCMAL
SKEEERLAVAYNNMVLVLGVGPGDPCPVVDGPTFTFYTQLPDTIATVAVLADSRVAYGMT
HGDLFLYECASSKVCPLEAHASRVSCVEVSHGGQLAVSGSEEGLLCLWDLGTCQCKLEMS
YMGSIIRGVQCVCFSQDDKYLFSAWRDGSILVWRALDGSLLTVQFVHAVVNRIIPTANGF
LAPTRQGRLIRVRFQCPAASASPQDALQNFQKAVWMVKTRRREELVAGAGSAQDPGSEAR
EKETNPNKRSQVCLLL
NT seq 4731 nt   +upstreamnt  +downstreamnt
atggacaccgagagagaggccttgctgctcagtgcctaccccgaagtgcaagccttctgc
cagaggcatggcctgggctttgaggtggttgatctgaggtggggtgttcgggaagcagat
gtctcagactacaccatgactgaactctgcctggaggaactcagccggtgtcaggaaaca
tccatagggcccactttcgtcgccctgctgggtgaccgctatggcccctgccctgtcccg
gggctgatcgaggagcgggagtgggaggcgctggcgggctccctgcgtgcccggcctcgg
gacctggagctggtggctcgccgcttccagagggacgagaacgcagtgccgcccacctac
gtcctgcaggagccagacgtgggcgaggcccgggggcccgaggaggcctcgctggcctct
gtcctccaggccggtgcgctggaggcccggaggctgggcctcctcagccaggagcagtgg
catcgctaccatcggtcagtcctcgagtgggagctggaagttggggtgctgcggcccggg
gcggcggcacggggggtcaccgtgttcctgcgggagatccgggacctcgacaagcacctg
ctggacgagtgcgcgctcctggcgctggaccgcctgcccgacggctgcccggacacgggg
gcccggggcctcctgcagcgcctcaaggaacgcctggcggaggagcaccccgaaatcatg
caggcccaccccttgccgtggagccgggacctgctgaaccccaagaacaaggcccatgcc
cgctacctccggggcctgggcgagcagttcgtggccagcgcccgtctccagatcctggcg
gggctgggggagcggggcgcggggctgggggcgcggggggcgccgcgggaccaggcctgg
ctcttcgaggagctgcgcgtgcaccagcggcgccaggccgccgaggccgcggcgcccctg
tgcggccggcaggagctgctggcccggctggggcggcggctgcgggacggggagcagcgc
ccgcaccccccgctcgtgctcttcggggccccgggcgtggggaagaccgccttgctgtgc
gcgctggcgggcggcgcgccggggctgctgggccgcaaggcggtcaccgcgctgcgggtg
ctgggggcgtcggggagcagcgtggaccccggcgcgctgccccgctccctcgccctgcag
ctgagcctggccttcgggctgccgccgccgcccggcccggtgctggcccgccgcggccgc
ctggcgcagttcctgcaggcgctgctgcacgccgcggcccgccgggactgcgagtccctg
gtgctggtgctggacgacgtggacgcgctggacggcctgggccccggccgcgacccgctc
ccctggctgcccgcccgctgcccgccccgggtccacgtcgtgctgtccgcctgctccggg
ggccggcggcggccacggcacgcgctggacgcgctgcgggccaagatccaggacgccgac
gccttcgtggaggtgccgccgctggccgccggccccgggcaggacttggtgcgcggcctg
ctggcggccgccgggagggcgctgagccccgcgcagcaggccgcgctctgggcctggctg
ccagactgcggccaccccggccggctgaggctggccttcgaggaggcccgccgctgggcc
tccttcaccgtgcccgccccgctggccggcaccgccgaggaggccacgcaccacctgtgc
gcgcgcctggaggatgcgcacgggcagctgctggtgtcccatgtgctgggctacatcgcc
gcctcccggttcgggctgtcggaggcggaactgaaggatgtgctgtccctggacgatgag
ctgctgtgcgaggcgtaccgggcctggacgccacccagccgccggctgctgcgcttcccg
cccctgctctgggtgcggctgcggagggacctgggcctctgcctggcccggaggcccgcg
gacggcggccagctcctcacccttgcccacaggcagctggctgaggtggtgagcgtgcgc
tacctgtcagggcccgagagagcccagaggcacagcgtcctggccgatttcttttcgggt
gcctggagccagggcaccaagaagctcatcaccctgccgcttgtgggggtacccctgagc
ctggaccgcaaggtggccccgcagccgctgtggttctcggactccgtggccaacgagcgg
cggctgcaggaactgccccgacacctgctgctggcgggccgcacgcgggagctgcggcag
gacctgctggggaacgtgagctggctggcgtgccgggcgctctcggggggcgccgaggcg
ctgctggatgacttcgacctctgcacgcagcacctccgctgccccgaggtcggcctgatc
cgcgaggccgtgcggctgagccgccccgcgctggagctccgaggcaccgagaagagcacg
ctgtacacggagctcctggcgcgcctccttttcttctccaagtcccaccccgcgctggtg
gggcagctgtgccagcaggcccagagctggctccgcgcatgcccgcaccccgtgctggtg
cccctggccggcttcttgcagccccctggaggccccctgcaggccaccctcactgggtgc
cacaagggcatcaccgccgtggcttggagccaggagcagcggctgctggtgcttggcacg
cacgacggtgtggtggccatgtgggacgtggaagaggaatgcccggtccacttcctcccc
gcacactcaggcgaggtgtggtgcgtgcgggtgttcgcgcagggcgcccgcgccgtctcc
gcctccacggaccgcacgctgcgcgtgtgggggctgctgtccggccagcagcagctcagc
atctgggacggaggcgcagcaaactccaccgagccccagacccggagcctccacgtggac
gaagcaaagcaagtcctgtacttggcgtcggggtcaaagatcagcgcgtgggcgctggag
acggcggcgctgctgttccgtgtcctgggcgaggcctcggacccctggctgtgcgcggcc
tggctggcggcccccacgcggctgctgaccgtgtcccgggcctgcgtggtcagcgtgtgg
agcgcagcctcgggcgcgctccagggcaagcagcgtctgagcagcgtccggggagagacc
cccacgtgcgccgctcccctccacaagcagggcaccgtggtcgctggctttagcaacggc
tctgtctccctgatttcctcgaagggagacagattgctggagaagcttccagaagctgtg
ggcttggtagaggtgtcggaagacggatctctcctggctgcaggtttcgggaaatctgtg
cggatctttctggccgacgcccagggtttccagcgattcctggctactgacctgcgacac
gaggacgcggttgagacagctgttttcggtcctaagaataacctgattgtcactgcatca
cgggacgccctcattcaggtgtggagcctgtcggagcagggcgcgctgctgggcctcctg
gatggtgtgggggcgccgctgggcacgctggtccgggcgggggcgctggtggtcggggcc
tcgcggtggtcttccaccttcagggcctgggatgtcagccgggcccgccagcgcggggcc
tgcgcccccttcccggaccgcacggggctcacggccgtgtctcacaacggaagctacgtc
tactttcccggagtcggcgagaaaaaccaagtcaccatctgggacctggcggagggcgag
gcgcgcggcgcgctggacacgtccagtgaggtccggtgtctggaggtggccgagcaaacc
aagctcctattcgctggcctggtttcgggggccgtgctggtgttccccctcaactccacg
caggacgtcctgtgcatccctccccccgaggcccggaaggccgtcacctgcatggcactg
agcaaggaggaggagcggctggccgtggcctacaacaacatggtcctggtgctgggcgtc
gggcccggggacccctgcccggtcgtcgatggccccacgttcaccttctacacccagctc
cctgacaccatcgccactgtggccgtgctggccgactcccgcgtggcctatggcatgacc
cacggcgacctcttcctgtacgagtgtgccagttccaaggtgtgccctctggaggcccac
gccagtagagtctcgtgcgtggaggtcagccacggggggcagctggcggtgagcggctcc
gaggaaggcttgctgtgtctgtgggacttgggcacctgccagtgcaaactcgagatgagt
tacatgggctccatcatcaggggtgtccagtgcgtgtgcttctcccaagacgacaagtac
ctgttctcagcctggagggacggctcaatcctcgtgtggagagcactggatggctctctg
ctgacagtccagttcgtccacgccgtggtgaacaggatcatccccacggccaatggtttc
ctggctcccaccaggcagggccggctcatccgggtgcggttccagtgcccagcggccagt
gcctcgccgcaggatgccctgcagaacttccagaaggctgtgtggatggtgaagaccagg
aggagagaagagctggtggccggtgcgggatcagctcaggaccccggctcagaggcccgg
gagaaggaaacgaaccccaacaagcgctcacaagtgtgcctgctgctgtag

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