KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122100782
Entry
122100782         CDS       T07891                                 
Symbol
Ubb
Name
(RefSeq) polyubiquitin-B
  KO
K08770  ubiquitin C
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03320  PPAR signaling pathway
dsp04120  Ubiquitin mediated proteolysis
dsp04137  Mitophagy - animal
dsp04140  Autophagy - animal
dsp05012  Parkinson disease
dsp05022  Pathways of neurodegeneration - multiple diseases
dsp05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122100782 (Ubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    122100782 (Ubb)
   04137 Mitophagy - animal
    122100782 (Ubb)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    122100782 (Ubb)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    122100782 (Ubb)
  09164 Neurodegenerative disease
   05012 Parkinson disease
    122100782 (Ubb)
   05022 Pathways of neurodegeneration - multiple diseases
    122100782 (Ubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dsp04121]
    122100782 (Ubb)
Ubiquitin system [BR:dsp04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   122100782 (Ubb)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 122100782
NCBI-ProteinID: XP_042527087
LinkDB
Position
Unknown
AA seq 457 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGY
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccttgactggcaagaccatcactctagaggttgagcccagt
gataccattgagaatgtgaaggccaagattcaggataaagagggcatccctcctgaccag
cagaggttgatcttcgcaggcaagcagctggaagatggccgcactctttctgattacaac
atccagaaggagtccaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc
gtgaagaccctgaccggcaagaccattaccctggaggtggagcccagtgataccattgag
aatgtgaaggccaagattcaggataaagagggcatccctcccgaccagcagaggctgatc
ttcgcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggag
tccaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttcgtgaagaccctg
accggcaagaccattaccctggaggtggagcccagtgataccattgagaatgtgaaggcc
aagattcaggataaagagggcatccctcccgaccagcagaggctgatcttcgcaggcaag
cagctggaagatggccgcactctttctgactacaacatccagaaagagtccaccctgcac
ctggtcctgcgtctgagaggtggtatgcagatcttcgtgaagaccctgaccggcaagacc
attaccctggaggtggagcccagtgataccattgagaatgtgaaggccaagatccaggat
aaagagggcatccctcccgaccagcagaggctgatcttcgcaggcaagcagctggaagat
ggccgcactctttctgactacaacatccagaaggagtccaccctgcacctggtcctgcgt
ctgagaggtggtatgcagatcttcgtgaagaccctgaccggcaagaccattaccctggag
gtggagcccagtgataccattgagaatgtgaaggccaagatccaggataaagagggcatc
cctcccgaccagcagaggctgatctttgcaggcaagcagctggaagatggccgcactctt
tctgactacaacatccagaaggagtccaccctgcacctggtcctgcgtctgagaggtggt
atgcagatcttcgtgaagaccctgaccggcaagaccattaccctggaggtggagcccagt
gataccattgagaatgtgaaggccaagatccaggataaagagggcatccctcccgaccag
cagaggctgatcttcgcaggcaagcagctggaagatggccgcactctttctgactacaac
atccagaaagagtccaccctgcatctggttctccgtctcaggggtggctattag

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