Dipodomys spectabilis (banner-tailed kangaroo rat): 122100885
Help
Entry
122100885 CDS
T07891
Symbol
Colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp00310
Lysine degradation
dsp00514
Other types of O-glycan biosynthesis
dsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122100885 (Colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122100885 (Colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dsp01003
]
122100885 (Colgalt1)
Enzymes [BR:
dsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
122100885 (Colgalt1)
Glycosyltransferases [BR:
dsp01003
]
O-Glycan biosynthesis
O-linked Gal type
122100885 (Colgalt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
LysX_preATP_grasp
Motif
Other DBs
NCBI-GeneID:
122100885
NCBI-ProteinID:
XP_042527206
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MAAAPRACGWRGQPPPGLLLPLLLLLARAAAYFPEERWSPESPLQAPRVLVALLARNAAH
ALPATLGALERLRHPRERTALWVATDHNADNTTAVLREWLVAVKSLYHAVEWRPAEEPRS
YPDEEGPKHWSDSRYEHVMKLRQAALKAARDMWADYILFVDADNLITNPNLLSMLIAENK
TVVAPMLESRAAYSNFWCGMTSQGYYRRTPAYIPIRKRERRGCFAVPMVHSTLLIDLRKA
ASRSLAFYPPHPDYTWSFDDIMVFAFSCKQAEVQMYVCNREVFGFLPVPLRAHSTLRDEA
ESFLHTQLEVMVKHPPVAYSRFISAPTRTPDKMGFDEVFLINLQRRQDRRARMLRALEEQ
EIACRLVDAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYGIWKEVVD
RGLQKSLVFEDDLRFEIFFKRRLMNLMEDVEREGLDWDLIYVGRKRMQVEHPEKAVPRVR
NLVEADYSYWTLGYALSLRGARKLLAARPLAKMLPVDEFLPVMFDKHPVSEYKAHFSPRD
LRAFSVEPLLLFPTHYTGDDGYVSDTETSVVWDNEGVQTDWDRAKSQKMREQQALSREAE
NSDVLQSPLDSAARDEL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctccgcgcgcgtgcgggtggcgcggacagccgccgcccgggctgctgctg
ccgctgctgctgctgctggcgcgcgccgccgcctacttcccggaggagcgctggagcccg
gagtcgccgctgcaggcgccgcgcgtgctcgtggcgctgctggcgcggaacgcggcccac
gcgctgcccgccacgctgggcgcgctggagcggctgcggcacccgcgggagcgcacggcg
ctgtgggtggccaccgaccacaacgcggacaacaccacggccgtgctgcgggagtggctg
gtggccgtgaagagcctgtaccacgcggtggagtggcggccggcggaggagccccggtcc
taccctgacgaggagggtcccaaacactggtccgactcccgctacgaacacgtcatgaag
ttgcgccaggcggccctgaaggcagcccgggatatgtgggccgattacatcctgtttgtg
gacgcggacaatctgatcaccaaccccaacctgctgagcatgctcatcgcggagaacaag
acggtggtggcgcccatgctggagtcccgggctgcgtattccaacttctggtgtggcatg
acctcccagggttactacaggcggaccccggcctacatcccgatccgcaagcgagagcgg
cggggctgcttcgcggtgcccatggtgcactccaccctcctcatcgacttgcggaaggcc
gcgtcccggagcctggccttctacccgccccaccccgactacacctggtccttcgacgac
atcatggtcttcgccttctcctgcaagcaggcggaggtgcagatgtacgtgtgcaacagg
gaggtattcggcttcctgcccgtgccgctgcgcgcccacagcactctgcgggacgaggcc
gagagcttcctgcacacgcagctggaggtcatggtgaagcacccgcctgtggcctactcg
cgcttcatctctgcgcccaccaggacccccgacaagatgggcttcgacgaggtgttcctg
atcaacctgcagcggcgtcaggaccggcgggcgcgcatgctgcgggcgctggaggagcag
gagatcgcctgccgcctggtggacgcggtggacggcaaagccatgaacaccagccaggtg
gaggcgctgggcatccagatgctgccgggctaccgcgacccctaccacgggcggccgctg
accaagggcgagctgggctgcttcctcagccactacggcatctggaaggaggttgtggac
cgggggctgcagaagtccctcgtgtttgaggacgacctgcgctttgagatcttcttcaag
aggcgcctgatgaacctcatggaggatgtggagcgcgagggcctggactgggacctcatc
tacgtgggccggaagcggatgcaggtggagcaccccgagaaggcggtgccccgtgtgcgg
aacctggtggaggctgactactcgtactggacgctgggctacgccctttccctgcggggc
gcgcgcaagctgctggccgcgcggccgctggccaagatgctgcccgtggacgagttcctg
ccggtcatgttcgacaagcacccggtgtccgagtataaggcccacttctccccgcgggac
ctgcgcgccttctcggtggagccactcttgctcttccccacgcactacacgggggacgac
ggctacgtgagcgacacggagacgtcggtggtgtgggacaacgagggcgtccagaccgac
tgggaccgcgccaagtcccagaagatgcgggagcagcaggcgctgagccgcgaggccgag
aactcggacgtgctgcagtccccgctggacagcgcagcgcgggacgagctctga
DBGET
integrated database retrieval system
