Dipodomys spectabilis (banner-tailed kangaroo rat): 122101057
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Entry
122101057 CDS
T07891
Symbol
Trim41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122101057 (Trim41)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122101057 (Trim41)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122101057 (Trim41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
Apolipoprotein
zf-RING_5
zf-RING_6
ALIX_LYPXL_bnd
TRIM_CC
DUF3631
Fer2
Phage_lysis
DUF1664
Motif
Other DBs
NCBI-GeneID:
122101057
NCBI-ProteinID:
XP_042527351
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDREELD
REEEEEDGEEEEVEAVGAGGGWDTPMRDDDYEGDMEEEVEEEEEGLFWNGGMGGSNWENM
DYVWEEDEEEEDLNYYLGDMEDLRGEEEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCFT
CPQCRKSFPRRSFRPNLQLANMVQVIRQMHPNPGRANRVNEQGICPKHQEALKLFCEVDE
EAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTEL
KSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLSR
LLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEIWSPDPCQPHSHDFLTDAIVRKMS
RMFCQAARVDLTLDPDTAHPALLLSPDRRGVRMAERRPEVADHSKRFSSDCCVLGAQGFR
SGRHYWEVEVGGRRGWAVGAARESTHHKEKMGPGGSSVGSGDASSSRHHHRRRRLHLPQQ
LLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGFYNAETLAHVH
TFSAAFLGERVFPFFRVFSKGTRIKLCP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgttgccatgacacccaaccccgtgcagacccttcaggaggaggcagtgtgc
gccatctgcctcgattacttcacggaccccgtgtccatcggctgcgggcacaacttctgc
cgagtgtgtgtaacccagctgtggggcggggaggacgaggaggaccgggaggagctggac
cgggaagaggaggaggaggacggggaggaggaggaagtggaggcggtgggggccggcggc
ggctgggacacccccatgcgggacgacgactacgagggggacatggaggaggaggtggag
gaggaagaggagggcctgttctggaacgggggcatgggcgggtccaactgggagaacatg
gactacgtgtgggaggaggacgaggaggaggaagatctgaactactacctgggggacatg
gaggacctgaggggcgaagaggaggaggatgaggaggaggtgctggaggaggacgaggag
gaggagctggaccccgtcaccccgctgcccccgcctccggccccccggaggtgcttcacc
tgcccccagtgccgaaagagttttcctcggaggagctttcgccccaacctgcagctggcc
aacatggtccaagtgattcgtcagatgcaccccaaccccggtcgggcgaaccgcgtgaac
gagcaaggcatctgtcccaaacaccaagaagccctgaagctgttctgcgaggtggacgaa
gaggccatctgcgtggtgtgccgggaatcgcggagtcacaagcagcacagtgtggtgcca
ctggaggaggtggtgcaggagtacaaggccaaactgcaggggcatgtggaaccacttcgg
aagcacctagaagctgtgcagaagatgaaagccaaggaggagagaagagtgacagagctg
aagagccagatgaagtcagagctggcggctgtggcatcagagtttgggcggctgacacgg
tttctggctgaggaacaggcagggctggagcggcgccttcgagagatgcacgaggctcag
ctgggacgtgccggagcagcggccagccgccttgccgagcaggctgcccagctgagccgc
ctgctggccgaggcccaggagcggagccagcagggaggcctgcggctgctccaggacatc
aaggagactttcaataggtgtgaagaggtacaactgcagccgccagagatctggtcccct
gacccgtgccaaccccatagccatgacttcctgacagacgccatcgtgaggaaaatgagc
cggatgttttgtcaggctgcaagagtggacctgacgctggatcccgacacggctcatcca
gccctgctgctgtcccctgatcgtcggggggtccgcatggcggagcggcgcccggaggtg
gcggatcattccaagcgcttctccagtgactgctgtgtactgggggcccagggcttccgc
tctggccggcactactgggaggtagaagtgggcgggcgacgggggtgggcggtgggtgct
gcccgagaatcaacccatcataaagaaaaaatgggccctggggggtcctctgtgggtagt
ggggatgccagttcctcgcgccatcaccatcgccggcgccggctccacctgccccagcag
ctcctgctccagagggaagtgtggtgtgtgggcacccacggcaaacgctaccaggcacag
agctcaaccgagcagacgctgctgagcccgtgtgagaaaccgaggcgctttggcgtgtac
ctggactatgaggctgggcgcctgggcttctacaatgcggagactctagctcatgtgcac
accttctcggctgccttcctgggcgagcgtgtcttccctttcttcagggtgttctccaag
ggcacccgcatcaagctctgcccttga
DBGET
integrated database retrieval system
