Dipodomys spectabilis (banner-tailed kangaroo rat): 122101123
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Entry
122101123 CDS
T07891
Symbol
Taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122101123 (Taf1c)
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
122101123 (Taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
122101123
NCBI-ProteinID:
XP_042527409
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MDFPSPLRPAFFMTGPLGMSDIPDLSFMCSWRDALTLPESPLPCSKGGALHPAPDLLWEP
ALPGPIPLLPPGPDPWDPGLTARDLLFRGANPYRRQPRAVLDITEQLSHFLWDHGDVAFT
PLGKLMLENFKLEGNRSRSKKVTVVSVKNLVRDLSGHQPWGCPWAYLTHRQRRFSILGGP
VLSRTVSSLLGRLLREELALTWEQLMLDEAFTGGALAWLPGRTAGTGQLVYPTGGALDRL
YLQEVSLASAGDPQVLGDPGCIQLRGPVRQVVTCTVQGETLLAVRSDYHCAVWKVGRQGR
PAPLQVVQVEKGATGVSLSPHLPGELAVCSRSGAVCLWTPQDGLQQIYKDSDTLVFRDLS
PWRWADFTAHPRVLTVGDRTGVKMIDTQAPPGCGLMLFRGGAEASCQKGERVLLVQYLGQ
TDGGSLPPTLHLVCTQFSLYLVDERLPLVPMMKWDHGLASPPLLACLLPPPGPSCPQPLL
LGGQGGQLQLLHITGDGTSPPRLATHPQSLPSCTDSLSAFPLLEPKSHQQLQERLEATTI
GLSATIPPPCGSTPILSVFQLSAAGDIFYQHLRLQTACSLRDEGAPGSPGPHRLPAGAAS
HPQDHAPTPSWDAQATAHCSRWLEALLQVPRAPRTWTAPTFSHRHLLGRLELQQSAGKTT
ERLRAAMAEGRLLRRGDLGPLPAAEPPPAPQPGPQDQLTERLGEAWEGRGAAWWGRQQDK
ISGPKKQAKRAKRRTQLSSTFSQSSCIDRPDSPGGPTPSPSEAAPRPPGTPPSQASLSGP
WLPRAPLERRQPLRDQVARLPPEDTPKQATVPLSQQTPGLTSSQPPRKKPRMGF
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagccccctccgcccagccttcttcatgactggcccccttggcatgagt
gatatccccgacttgtcgttcatgtgtagctggagagatgccctgaccctcccagagtcc
cctctcccctgctccaagggtggggcactccacccggccccggacctgctgtgggagccg
gcgctgccaggacccatccccctgctgcctcccggtcccgacccctgggaccctggcctg
acagcccgtgacctccttttccgaggcgcgaacccctatcggaggcagccccgggctgtg
ctggacattactgagcagctcagccacttcctgtgggatcatggggacgtggccttcacc
ccgctggggaagctgatgctggagaacttcaagctggagggaaaccggagccgctctaag
aaggtgacggtcgtcagcgtgaagaacctggtccgggacctcagcggacaccaaccctgg
gggtgtccctgggcttacctcacccaccggcaacgccgcttctccatcctcgggggcccc
gtcctcagcaggacggtctcgagcctgctggggcgtctgctgcgggaggagctggccctg
acgtgggagcagctcatgctggacgaggccttcaccgggggcgccttggcctggctgcct
ggcaggactgcgggcaccgggcagctggtctaccccaccggaggcgccctggacaggctg
tatctccaggaggtcagtttggcttccgccggtgacccccaggtcctaggggaccctgga
tgcatccagctccggggacctgttcggcaggttgtcacctgcaccgtccagggagaaaca
ctgctggctgtccgctccgactaccactgtgccgtgtggaaggtgggcaggcaggggcgg
cccgcccctttgcaggtggtccaggtggagaagggtgccaccggggtcagtctcagcccc
cacctgccaggggagctggccgtgtgcagccgctccggagccgtgtgcctctggacgccc
caggacgggctacagcagatctacaaggactcggacacgctcgtgttccgggacctctcg
ccctggcgctgggcagacttcacggcccaccctcgggtgctcaccgtgggtgaccgcacc
ggtgtgaagatgatcgacacacaggcacccccgggctgcgggctgatgcttttccgaggg
ggggcagaggcttcctgccagaaaggggagcgtgtgctgctcgtccagtacctgggccag
acggacggcgggtctctcccgcccacactgcacctcgtctgcacccagttctccctctac
ctggtggacgagcgcctccccctggtgccgatgatgaaatgggaccatggcctggcctcc
ccgcccctgctggcctgcctgctgcctcctcctggtcccagctgcccgcagcccctgctt
ctggggggccaggggggtcagctgcagctgctgcacatcacaggagacggaacctccccg
ccccggctggccacacacccgcagtccctgccctcctgcaccgactccctgtctgccttt
cccctgctggagcccaagagccatcagcagctgcaagagcgcctggaagctacaactata
ggcctgtctgccaccatcccaccaccctgtggctccacgcccatcctgtcagtcttccag
ctctcggccgccggggacatcttctaccaacacctccgcctgcagacggcctgcagcctc
cgtgatgagggggctccaggcagcccggggccccaccgccttcctgccggcgcggcctct
caccctcaggaccatgcgcccacaccgtcctgggatgcccaggccactgcccactgcagc
cggtggctggaggccctgctgcaggtaccccgtgcaccccgtacgtggactgcacccacc
ttttcccaccgccacctactgggccgcctggagctgcagcagagcgcagggaagaccacg
gagcgcctgcgggcagccatggccgaggggcggctgctgcggcgcggggacctgggcccc
ctccctgctgcagaaccaccccccgccccccagccaggccctcaggaccagctcaccgag
cgtctgggggaggcctgggaaggccggggtgctgcttggtgggggagacagcaggacaag
atttcagggcccaagaaacaggccaagcgggccaagcgccggactcagctgtccagcacc
ttctcacagagcagctgcatagaccgcccggacagccccggtggccccaccccgagcccc
tcggaggctgcgccacggcccccagggacgccaccctcccaggcatccttgtcgggaccc
tggttaccccgagccccattggagcggcggcagcccctccgggaccaggtggccaggctg
ccacccgaggacacccccaaacaagccacggtgcccctctcacagcagacacctggcctc
accagctcccagcctccccggaagaagccacgcatgggattctga
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