KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122101547
Entry
122101547         CDS       T07891                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dsp03041]
    122101547
Spliceosome [BR:dsp03041]
 Complex B
  Other components
   Complex B specific factors
    122101547
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Ge1_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_WDR75_2nd Beta-prop_IP5PC_F Beta-prop_DCAF12 TFIIIC_delta Beta-prop_BBS7 KNTC1_N VPS8_N Mala_s_1-like DUF7165 PROPPIN Beta-prop_NOL10_N Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 122101547
NCBI-ProteinID: XP_042527826
LinkDB
Position
Unknown
AA seq 406 aa
MHRNLIDRKTVACPLGSYFDPGEAYPEGSSKEKRRAAIAQALAGEVNVVPPSRLLALLGQ
ALKWQQHQGLLPPGPTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQ
YLVTGSVDGFIEVWNFMTGKIRKDLKYQAQDNFMMMDAAVLCMCFSRDTEMLATGAQDGK
IKVWKIQSGQCLRRFERAHGKGVTCLSFSKDSSQILSASLDQTIRIHGLKSGKTLKEFRG
HSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTLKSLGSTAGTDITVNNVILLP
KNPEHFVVCNRSNTVVIMNIQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLY
CFNTVTGKLERTLTVHEKDVIGIAHHPHQNLIVTYSADGLVKLWKP
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgcaccgcaacctcatagatagaaaaaccgtggcctgtcccttggggtcttactttgat
cctggtgaggcatacccagaaggaagcagcaaagagaaaagaagagcagccattgcccaa
gccttagctggcgaagtcaatgtggtgcctccatctcgtctcttggcattgctgggccag
gctctgaagtggcagcagcaccaagggttgctccctcctggtcccaccatagatctgttt
cgaggtaaagcagctgtcaaagatgtggaggaagaaaagtttcctacacagctgagcagg
catattaagtttggtcagaagtcacacgtggaatgtgctagattttctcctgatggtcag
tatctggtcactgggtctgttgatggatttattgaagtatggaactttatgactggaaaa
atcaggaaggatcttaagtaccaggcacaggataacttcatgatgatggacgctgctgtc
ctctgcatgtgttttagcagagatacagaaatgttagcaactggggcccaagatggaaag
atcaaggtgtggaagattcagagtggacagtgtttaaggaggtttgaaagggcacacggt
aaaggtgtcacctgtctgagcttttccaaagacagcagtcagatccttagtgcctctttg
gaccagacaatcagaattcatggcttaaaatctgggaaaaccctgaaggaatttcgtggt
cattcctccttcgttaatgaagcaacatttacacaagatggacattatattatcagtgct
tcctctgatggcactgtaaagatctggaatatgaagacaacagaatgctcaaataccttg
aagtccttgggcagcactgcggggacagacattactgtcaacaatgtgatcctgcttcct
aaaaacccagaacactttgtggtgtgcaaccgatcaaacactgtggtcatcatgaacata
caaggccagattgtcagaagcttcagctctggtaagagagaaggtggtgactttgtttgc
tgtgctctctctcctcgtggtgaatggatctattgtgtgggggaagactttgtgctctac
tgctttaacacagtcactggcaaactggagagaactttgacagttcacgagaaggatgtg
attggtattgcacatcatcctcatcagaatttgattgttacctacagtgcagatggactt
gtaaagctctggaaaccctaa

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