KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122101549
Entry
122101549         CDS       T07891                                 
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
  KO
K12819  pre-mRNA-processing factor SLU7
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122101549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dsp03041]
    122101549
Spliceosome [BR:dsp03041]
 Complex C
  Other components
   Step II factors
    122101549
SSDB
Motif
Pfam: Slu7 WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st NBCH_WD40 Ge1_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_BBS7 TFIIIC_delta PROPPIN VPS8_N Beta-prop_NOL10_N zf-CCHC_4 DUF7165 zf-CCHC
Other DBs
NCBI-GeneID: 122101549
NCBI-ProteinID: XP_042527828
LinkDB
Position
Unknown
AA seq 969 aa
MSSAAVDTVNATPLSGSKELSLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDIN
PHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSITTKYRKGAC
ENCGAMTHKKKDCFERPRRVGTKFTGTNIAPDDHVQPQLTFDYDGKRDRWNGYNPEEHMK
IVEEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDE
DKYAEDIDMPGQNFDSKRRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRAMRENPYANA
GKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYEKGSEVHLQADPTKLELLYKSFKVK
KEDFKEQQKESILAKYGGQEHLDAPPAVLLLAQTEDYVEYSRHGAIIKGQERAVACSKYE
EDVKIHNHTHIWGSYWKEGRWGYKCCHSFFKYSYCPGEAGKETANAEECVISDETGKESV
KKPQTLVEMHQEKLKEEKKKKHRKSSSDSDDEEKKQEKLKALNAEEARLLRVKEILQMDG
RKRPYNSVYETREPTEEEMEAYRMKRPRPDDPMASFLGQQSYFDPGEAYPEGSSKEKRRA
AIAQALAGEVNVVPPSRLLALLGQALKWQQHQGLLPPGPTIDLFRGKAAVKDVEEEKFPT
QLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFMTGKIRKDLKYQAQDNFMMD
AAVLCMCFSRDTEMLATGSQDGKIKVWKIQSGQCLRRFERAHGKGVTCLSFSKDSSQILS
ASLDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECS
NTLKSLGSTAGTDITVNNVILLPKNPEHFVVCNRSNTVVIMNIQGQIVRSFSSGKREGGD
FVCCALSPRGEWIYCVGEDFVLYCFNTVTGKLERTLTVHEKDVIGIAHHPHQNLIVTYSA
DGLVKLWKP
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgtcgtcggcagctgtggatacagttaatgccacgcccctgtcggggtccaaagaactg
agtttagaggaaccaaagaagatgacccgagaggactggaggaagaagaaggagctagaa
gaacagcggaagctgggtaatgctcctgctgaagtggatgaagaaggaaaagatatcaat
ccacacatccctcagtatatttcttcagtaccatggtacatcgatccatcgaaaagaccc
accttaaagcaccagaggccacaacctgagaaacagaagcagttcagttcatctggagaa
tggtacaagaggggcgtaaaagagaattccataaccaccaagtaccgcaaaggcgcctgc
gagaactgcggggccatgacgcacaagaagaaggactgctttgagagacccagacgagtt
gggaccaagtttactgggactaacatagcgccagatgatcacgtccagcctcagctcaca
tttgactacgacgggaagagagatcgctggaatggctacaatccagaggaacacatgaaa
atcgtggaagagtatgccaaagttgacctggcaaaacgaacgctgaaagcccagaaatta
caagaagaattagcctcaggaaaattagtggaacaagctaattctccaaaacatcagtgg
ggagaagaggaaccaaattctcagatggaaaaagatcacaacagtgaagatgaggatgaa
gataaatatgcagaggatattgacatgcctggacagaattttgactctaagaggcgaatt
acagtccggaacctaaggattcgagaagatactgcaaaatatttgagaaatttagatcca
aattctgcctactatgatcccaaaactagagcgatgagagaaaatccctacgccaatgca
ggcaagaatccagatgaagtgagttatgcaggcgataacttcgtcagatacacaggagat
accatttccatggctcagacacagttgtttgcctgggaggcgtatgagaagggctcggag
gtgcacctgcaggcagatcccacgaagctggagctgttgtataaatccttcaaagtcaag
aaggaagacttcaaagaacagcagaaagaaagcatcctggcaaagtatggtggccaagaa
catctggatgctcctccagctgtgttgctcttagcccagacggaagactacgtggagtac
tcacggcatggggccatcatcaaggggcaggagcgggccgtggcctgctccaagtatgaa
gaggacgtgaagatccacaaccacacgcacatctggggatcttactggaaagaaggccga
tggggatacaaatgctgtcactcgttcttcaagtattcctactgccctggagaagctggg
aaggagactgctaacgccgaggagtgcgtgataagtgatgagactggcaaagagtcggtg
aagaaaccacagacgctcgtggagatgcaccaagaaaaactgaaggaggagaagaaaaag
aagcaccggaagagcagctctgacagcgatgacgaagagaagaaacaggagaaactgaag
gcactgaacgccgaggaggcccgcctgctccgtgtcaaggagatcttacaaatggacggg
agaaagcggccatacaacagtgtctatgaaactcgagagcccacggaggaggaaatggag
gcctacagaatgaaacgtccgaggccagatgaccccatggcctctttcctgggccagcag
tcttactttgatcctggtgaggcatacccagaaggaagcagcaaagagaaaagaagagca
gccattgcccaagccttagctggcgaagtcaatgtggtgcctccatctcgtctcttggca
ttgctgggccaggctctgaagtggcagcagcaccaagggttgctccctcctggtcccacc
atagatctgtttcgaggtaaagcagctgtcaaagatgtggaggaagaaaagtttcctaca
cagctgagcaggcatattaagtttggtcagaagtcacacgtggaatgtgctagattttct
cctgatggtcagtatctggtcactgggtctgttgatggatttattgaagtatggaacttt
atgactggaaaaatcaggaaggatcttaagtaccaggcacaggataacttcatgatggac
gctgctgtcctctgcatgtgttttagcagagatacagaaatgttagcaactgggtcccaa
gatggaaagatcaaggtgtggaagattcagagtggacagtgtttaaggaggtttgaaagg
gcacacggtaaaggtgtcacctgtctgagcttttccaaggacagcagtcagatccttagt
gcctctttggaccagacaatcagaattcatggcttaaaatctgggaaaaccctaaaggaa
tttcgtggtcattcctccttcgttaatgaagcaacatttacacaagatggacattatatt
atcagtgcttcctctgatggcactgtaaagatctggaatatgaagacaacagaatgctca
aataccttgaagtccttgggcagcactgcggggacagacattactgtcaacaatgtgatc
ctgcttcctaaaaacccagaacactttgtggtgtgcaaccgatcaaacactgtggtcatc
atgaacatacaaggccagattgtcagaagcttcagctctggtaagagagaaggtggtgac
tttgtttgctgtgctctctctcctcgtggtgaatggatctattgtgtgggggaagacttt
gtgctctactgctttaacacagtcactggcaaactggagagaactttgacagttcacgag
aaggatgtgattggtattgcacatcatcctcatcagaatttgattgttacctacagtgca
gatggacttgtaaagctctggaaaccctaa

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