KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122101699
Entry
122101699         CDS       T07891                                 
Symbol
Kdm5a
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dsp01009]
    122101699 (Kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dsp03036]
    122101699 (Kdm5a)
Enzymes [BR:dsp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     122101699 (Kdm5a)
Protein phosphatases and associated proteins [BR:dsp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122101699 (Kdm5a)
Chromosome and associated proteins [BR:dsp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122101699 (Kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 PHD_2 PHD-1st_NSD
Other DBs
NCBI-GeneID: 122101699
NCBI-ProteinID: XP_042528109
LinkDB
Position
Unknown
AA seq 1690 aa
MAGVGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPP
FACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSNLKIPVVERKILDLYAL
SKIVASEGGFEMVTKEKKWSNVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
VQMPTLEMKEKVEPEVLCPDTQTSPESGARMNILPKRTRRVKSQSDSGDVNKNTELKKLQ
IFGAGPKVVGLAMGAKDKEDEVTRRRKVTNRSDAFNMHMRQRKGTLSVNFVDLYVCMFCG
RGNSEDRLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVRE
YTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGS
GFPVKDGRRKMFPEEEEYALSGWNLNNTPVLEQSVLAHINVDISGMKVPWLYVGMCFSSF
CWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIM
NPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVN
HYRRLKRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQMGVLM
SEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPADLCPCPMQKKCLRYRY
PLEELPSLLCGVGARAQSYDTWVSRVTEALSDNLSHKKDLIELRVMLEDAEDRKYPENDL
FRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVI
SQARQVKNLLDDVEEFHERAQKAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQ
ARWLDEVRLTLSDPQQVTLDAMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
LCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALHKAREWTAKVEALQSGSNYAYL
EQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDI
GIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTAMVVAVFKEREQKEIEA
MHSLRAANLAKMTVAGRPEEVRFCICRKTASGFMLQCELCKDWFHNSCVPLPKPSSHKKG
SSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLSSFQQSA
FNRVVSSVSSSPRQTVDYDDEETDSDEDIRETYGYDIKDTASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSMEEKPLKMKGKD
SSEKKRKRKLEKAEQLFGEGKQKSKETKKMDKPKKKKLKLNTEKSKELNKLAKKLAKEEE
RKKKKEKAATAKVELVKENTEKKREKKVLDIPSKYDWSGAEESDDENAVCASQSCQRPCK
DKVDWVQCDGGCDQWFHQVCAGVSPEMAESEDYICINCAKKPGPDSPGHAAPPAFIMSYK
LPMEDLNEAS
NT seq 5073 nt   +upstreamnt  +downstreamnt
atggcgggcgtcgggcccgggggctacgcggccgagttcgtgccgcccccggagtgcccg
gtcttcgagcccagctgggaggagttcaccgacccgctcagcttcatcggccgcatccgg
cctctggccgagaagaccggcatctgcaaaatccggccgcccaaggattggcagcctccg
tttgcatgtgaagtaaaatccttccgttttactcctcgagtccagcgactgaatgaactt
gaggcaatgaccagagtgagactggatttcttggatcaactggcaaaattttgggaactt
caaggatctaatttgaagatacctgtggtggaaagaaaaatcctagacctctatgcattg
agcaagatcgttgccagtgaaggaggatttgaaatggtcaccaaggagaagaaatggtct
aacgtcgggagccgcttgggatatctaccaggaaaaggaactggatctcttctgaagtcc
cactatgaaagaattctctacccctatgagctattccagtctggtgtcagccttatgggt
gtgcagatgcctactttagaaatgaaggagaaagtggagcctgaggtcctctgccctgat
actcagacttcgccagagtcgggagcaagaatgaacatcctgccaaaaagaacaagacgt
gtcaagtcccagtcagactctggagatgtgaataaaaacacagaactgaagaaactccag
atttttggagctggacccaaagttgtgggtctagcaatgggagcaaaagataaagaagat
gaggtcacccgaagacgaaaagttaccaacaggtcagacgcatttaacatgcacatgaga
caacggaaaggaactctgtctgttaactttgttgatctctacgtgtgtatgttttgtggt
cggggaaacagtgaggacaggctgcttttgtgtgacggatgtgacgacagctatcacacg
ttctgtctcattccaccgctgcccgatgtgcccaagggagactggaggtgtcctaagtgc
gttgctgaggagtgtaacaaaccccgagaagcttttggatttgaacaagctgtacgagaa
tacacgcttcagagttttggggagatggcagataacttcaagtctgattatttcaatatg
ccagtccatatggtacctacagagctagtggagaaggagttctggaggctggtgagcagc
atcgaggaagatgttattgtagagtatggtgctgacatctcctcaaaggacttcggaagt
ggatttcctgtcaaggatggtcggaggaagatgttcccagaggaagaggaatatgcgctt
tcgggctggaatttgaacaacacgcccgtcctggagcagtccgttctcgcgcacatcaat
gtggacatttctggcatgaaggtgccttggctgtatgtggggatgtgtttctcttctttc
tgctggcacattgaggatcactggagctactccattaactacttgcactggggtgagcca
aagacgtggtatggggtaccgtctcatgctgcagaacagctggaggaagtgatgagggag
ctggcccctgagctgttcgaatcccagcctgacctcctgcatcagctagtcaccatcatg
aaccccaatgtgctgatggagcatggggtgcctgtgtacaggaccaatcagtgtgctgga
gagtttgtagtgacatttcctcgtgcctaccactctggattcaaccagggctacaacttt
gcggaggctgtgaacttctgtactgctgactggctgcccattggtcgtcagtgtgtaaat
cattaccgaaggctgaagcgccactgtgtcttctctcatgaggaactcattttcaaaatg
gcagcagatccagaatgcctggatgtagggctggccgctatggtctgcaaagagttgact
ctcatgactgaagaagaaacgcgattaagggagtccgttgttcagatgggtgtcctgatg
tcagaagaggaagtgtttgagcttgttcctgacgatgagcgacagtgctcagcatgcaga
accacgtgcttcctctcggctctcacctgctcctgtaatcccgagcggctggtgtgtctc
taccacccagctgatctgtgcccctgccccatgcagaagaaatgtcttagataccgctac
cccctggaagagctcccttccctcctgtgcggcgtgggggccagggcgcagtcctacgac
acttgggtcagtcgcgtcacagaggcactgtctgataacctcagccacaagaaagacttg
attgaattaagagtaatgcttgaagatgctgaggacaggaaatacccagagaacgatctc
tttcggaaactcagggatgctgttaaagaagccgagacctgtgcttctgtggctcagctg
ctgcttagcaagaagcagaaacatagacagagcccagatagtgggagaacgcggaccaaa
ctgacagtagaagaactgaaggcctttgtccagcagcttttcagtcttccatgtgtcatc
agccaagctcgacaagtgaagaatctgctggatgatgtggaagagtttcatgaacgtgct
cagaaggccatgatggatgaaacgccagattcttccaaactccagatgctgatagacatg
ggttctagtctctatgtggagcttcctgaattaccccggctgaaacaagagctccagcag
gctcggtggctggatgaagtgaggctgaccctatccgatcctcagcaggtcactttggat
gccatgaagaaactgattgactctggtgtaggactggcaccccaccatgctgtggagaaa
gcaatggctgaactacaggagctccttacagtctctgaacgatgggaggaaaaggctaag
ctttgcctgcaggcaagaccacgacacagtgtagcaagtttagaaagcattgtgaatgaa
gccaagaacattccagcctttcttccgaacgtgttgtccctgaaagaggccctacacaag
gctcgagaatggacagcaaaggtggaagctcttcagagtggcagcaattatgcttacttg
gagcagcttgagagcttatctgccaagggacgccccatccctgtgcggcttgatgccctg
ccccaggtggagtcgcaggtcgcggcagcacgggcttggagagagcggactgggcgcacc
tttctgaagaagaattccagccatacactgctgcaggtgctaagtccccgaactgacatt
ggtatatacgggagtggtaaaaacaggaggaaaaaagtgaaagaattaatagaaaaagaa
aaagagaaggacctagacctcgagcccttgagtgatttggaggaaggactggaggaaaca
agagatacagccatggtggtggcagttttcaaagaacgagagcaaaaagagattgaggcc
atgcactccctccgggcagctaacctagccaagatgacggtggcgggccgcccagaggaa
gtcaggttttgcatttgccggaagacagccagtgggtttatgctgcagtgcgagctctgc
aaggactggttccacaacagctgtgttccccttcccaagccaagttcccacaagaaaggg
tccagttggcaggccaaagaagtcaaattcctgtgccctctttgcatgaggtctcgcagg
cccaggctagagactattttgtcactcctggtgtcccttcagaagctgcctgtacggttg
cctgagggagaagccctgcagtgtttgacggaacgtgctatgagctggcaagatagagca
cggcaggccctggccacagatgaactgtcctctgctttggccaaactctctgtgctaagc
cagcgtatggtggagcaggccgctcgggaaaagaccgagaagatcatcagcgcagaactc
caaaaagcagccgccaacccggacttacagggacacttgtctagttttcaacagtcagct
tttaaccgggtggtgagcagtgtatcgtcttctccccggcaaacagtggactacgacgac
gaggagacagattccgacgaggacattagagagacgtatggctatgacataaaggataca
gccagtgtgaagtcctctagtagtctggagcccaatcttttttgtgatgaagagattccc
atcaagtctgaggaagtggtgacacacatgtggactgcgccttcgttctgtgcagagcat
gcgtattcttctgcttccaagagctgttcacaaggttcgagcaccccaagaaagcaacct
cggaagagccccttagttccccgaagtttggaacctccagtgttggagctgtcaccggga
gcgaaagcccaattggaagaactcatgatggtcggagaccttctggaagtgtctctagat
gagacacaacacatatggcggattttgcaggccacacacccaccctcagaagacagattc
ttgcatatcatggaggatgacagcatggaagagaaaccattaaaaatgaaaggaaaggac
tcctcagagaagaaacggaaacgaaagctggaaaaggcagagcagctttttggagaagga
aaacagaagtctaaggagacaaagaaaatggacaaacctaaaaagaagaaattaaaatta
aacacagagaaatcaaaggagctgaataaactagccaagaagctagcaaaagaagaagag
agaaagaaaaagaaagaaaaggctgccacagccaaagttgaacttgtgaaggagaatacg
gagaagaagagggagaagaaagtgctggacatcccttccaagtacgactggtccggagcg
gaggagtctgacgacgagaacgccgtgtgtgcttcccagagctgccagaggccctgtaag
gacaaggtggactgggtgcagtgtgatggtggctgtgaccagtggtttcatcaggtgtgt
gctggggtgtctccagaaatggcagaaagcgaagactacatctgtataaactgtgcgaag
aagccggggccggacagcccgggccacgcggcacctcccgccttcatcatgagctacaaa
ttaccaatggaggacctgaacgaggccagttag

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