Dipodomys spectabilis (banner-tailed kangaroo rat): 122101735
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Entry
122101735 CDS
T07891
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha-like
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122101735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122101735
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122101735
Enzymes [BR:
dsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122101735
Transcription machinery [BR:
dsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
122101735
DNA repair and recombination proteins [BR:
dsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
122101735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
122101735
NCBI-ProteinID:
XP_042528134
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MVGEKVTISTRTLQWKCVESRTYNKRLYYERFILAPLLKGQADTIGIAMRRALLAETEGT
RITRAKFEQIPHEFSTIMGSQESVHQILMNLKAIVLRSNLYGTHTASICVKGPREVTAQD
ILLPIAVEIIDNTQHIASLKEPIDLYIELEIERNRGYRRHLPNAFQDGSYPIDAIFGPVI
TANHSVHSYGNETSKQEILFLEIWTNGSLTPKEALHEASRNLIDFFIPFLHAEEENFPEE
EKFPEELNQHRATLPLLTFTFYESFPKLIQNKTERGFRSFFIDQCEFPPKIYNCLKKANI
HTLWDLLSKSEEDLMKMEHFSIEDLREII
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggttggggaaaaagtaacaatatctactcgtacactacagtggaagtgtgttgaatcg
agaacatacaataagcgtctttattatgagcgctttattctagctccacttttgaaaggt
caagccgatacaataggcattgcaatgcgaagagctttgcttgcagaaacagaaggaaca
cgtattacacgtgcaaaatttgagcaaataccacacgaattttcgacgataatgggtagt
caagaatcagtacatcaaattttaatgaatttgaaagcaattgtcttaagaagcaattta
tatggaactcacaccgcgtcgatttgtgtcaaaggtcctcgagaagtaactgctcaagac
atcctcctgcccattgctgtggaaataattgataatacacaacatattgctagcctaaag
gaaccaattgatttgtatattgaattagaaatcgagaggaatcgcggctatcgtcgacat
ttgccaaatgcctttcaagatggaagttatcctatagacgccatattcggacctgttata
accgcaaatcatagtgttcattcttatggaaatgagacttcaaaacaagaaatacttttt
cttgaaatctggacaaatggaagtttaactcctaaagaagcacttcatgaagcctctagg
aatttgattgatttttttattccttttttacatgcagaggaagaaaacttccctgaagaa
gaaaaattcccggaagaactaaatcaacacagggctactttaccacttttgacttttact
ttttatgagagtttcccgaaactaatccaaaataaaacagaaaggggatttagatctttt
tttattgaccaatgtgaattcccccctaagatctataattgcctgaaaaaggccaatata
cacacattatgggatctgttgagtaagagtgaagaagaccttatgaaaatggaacatttt
agcatagaagatctaagagaaataatctga
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