Dipodomys spectabilis (banner-tailed kangaroo rat): 122101775
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Entry
122101775 CDS
T07891
Symbol
Hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04371
Apelin signaling pathway
dsp04613
Neutrophil extracellular trap formation
dsp05034
Alcoholism
dsp05203
Viral carcinogenesis
dsp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
122101775 (Hdac5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
122101775 (Hdac5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
122101775 (Hdac5)
05203 Viral carcinogenesis
122101775 (Hdac5)
09165 Substance dependence
05034 Alcoholism
122101775 (Hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122101775 (Hdac5)
Enzymes [BR:
dsp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122101775 (Hdac5)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122101775 (Hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
122101775
NCBI-ProteinID:
XP_042528150
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCFSADGMLGREPPLEILPRTPLHSIPVAVEVKPVLPGA
MPSPMGGGGGGSPSPVELRGALAGPVDPVLREQQLQQELLVLKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHSKCWGAHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEITGAGPGVSSVCNSAPGSGPSSPNSSHNTIAENGFTGSVPNIPTEMLPQHR
ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQG
STLTGGTLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPL
HGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQK
QQQQLQLGKILTKTGELPRQPTTHPEETEEELTEQQEALLGEGAVTMPREGSTESESTQE
DLEEEEEEEEEEDEDCIQVKDEEGESGPEEGPDLEESSASYKKLFTDAQQLQSLQVYQAP
LSLATVPHQALGRTQSSPAAPGGMKSPPDQPTKHLFTTGVVYDTFMLKHQCMCGNTHVHP
EHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSK
KLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFA
IIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDP
SVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVV
MPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMKLAGGRVVLALEGG
HDLTAICDASEACVSALLSVELQPLDEAVLQQKPNVNAVTTLEKVIEIQSKHWSCVQRFA
AGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQAAAAREHSPR
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccaaggcgcaggggctcgtggagatgctgcagaccatctacgagacc
gagtcctgtttctcagcagatggcatgttaggccgggaaccacccttggaaatcctgcct
cggactcctctgcacagcatccctgtggcagtggaggtgaagccagtactgccaggagcc
atgcccagccccatggggggcgggggtggaggcagccccagtcctgtggagttgcggggg
gctctggctggccctgtggaccctgtgctccgggagcagcaattgcagcaggaactcctg
gtgctcaaacagcagcagcagctgcagaagcagctcctgtttgctgagttccagaagcag
catgaccacctgacacggcagcatgaggtccaactacagaagcacctcaagcagcagcag
gagatgctggcggccaagcggcaacaggaactggagcagcagcggcaacgggagcagcag
cggcaggaggagctggagaagcagcggctggagcagcagctgctcatcctgcgcaacaag
gaaaagagcaaagagagtgccatcgccagcactgaggtgaagctgaggctccaagaattc
ctcttgtcaaagtcaaaggagcccacgccaggcggcctcaaccattccctcccacagcac
tccaaatgctggggagcccaccatgcttctttggaccagagttcccctccccagagcggc
ccccctgggacgcctccctcttataaactgcctttgcttgggccctatgacagccgtgat
gacttccccctccgcaaaacagcctctgaacccaacttgaaagtgcgttcgaggctaaaa
cagaaggtggctgagcggagaagtagtccccttctgcgtcgcaaggatggaactgttatt
agcacctttaagaagagagcagttgagatcacaggcgctggacctggggtgtcgtccgtg
tgtaacagtgcgcccggctccggccccagctctcccaacagctcccacaacaccatcgct
gaaaatggctttaccggctcagtccccaacatccctaccgagatgctcccccagcaccgg
gccctccctctggacagctcccccaaccagttcagcctctacacgtctccctctctgccc
aacatctccctagggctgcaggccacggtcactgtcaccaactcgcacctcactgcctcc
ccgaagctgtcaacacagcaggaggctgagaggcaggctcttcaatccctgcgccagggc
agcacactaactgggggcacattaacgggcaagttcatgagcacatcttccatccctggc
tgcctgctgggcgtggcactggagggtgacacaagcccccatgggcacgcctcattgctg
cagcatgtgctgctgctagagcaggcccggcagcagagcaccctcatcgctgtgccactg
cacgggcagtccccattggtgactggtgaacgtgtggccaccagcatgcggacagtgggc
aagcttccaaggcaccggcccctgagtcgcacccaatcctcgccactgccacagagtccc
caggccctgcagcagctggtcatgcagcagcagcaccagcagtttctggagaagcagaag
cagcagcagcagctacagctgggcaaaatccttaccaagactggggagctgcccaggcag
cccactacccaccctgaggagacagaagaggagctaaccgagcagcaggaagccttgcta
ggagagggcgctgtgaccatgccacgggaaggctccacagaaagtgagagcactcaggaa
gacctggaagaagaagaggaggaagaagaagaggaagatgaggactgcattcaggtcaag
gatgaagagggagaaagtggccctgaggaggggcccgacttggaggagtccagtgccagt
tataaaaagctgttcacagatgcccagcagctgcagtccttgcaggtgtaccaggcaccc
ctcagcttggccactgtgcctcaccaagccctgggtcgcacccagtcctcacctgctgct
cctggaggcatgaagagccccccagatcagcccaccaagcacctcttcaccactggtgtg
gtctatgacacgttcatgctgaagcaccaatgcatgtgcgggaacacacacgtgcacccc
gagcacgctggccgcatccagagtatctggtcccggctgcaggagaccggcctgctcagc
aagtgcgagcggattcggggtcgcaaagccaccctggatgagatccagacagttcactct
gaataccataccctgctctatgggaccagccccctcaaccgacagaagcttgacagcaag
aaactgcttggccccatcagccagaagatgtatgccatgctgccttgcgggggtattggg
gtggacagtgacaccgtgtggaacgagatgcactcctccagtgctgtgcgcatggcagtg
ggctgcctggtggagctggccttcaaggtggctgcaggagagctcaagaatggatttgcc
atcatccgacccccaggacaccatgctgaagagtccacagccatgggattctgcttcttc
aactccgtagccatcacagctaaactcttgcagcagaagttgaatgtgggcaaggtcctc
atcgtggactgggacattcaccatggcaatggcacccagcaagcgttctacaatgacccc
tctgtgctctacatctccctgcatcgctatgacaacgggaacttttttccaggctctggg
gctcctgaagaggttggtggagggccaggtgtggggtacaatgtgaacgtggcatggaca
ggaggtgtggacccccccatcggagacgtggagtacctgacagccttcaggacagtggtg
atgcccattgcccacgagttctcacctgacgtggtcctagtctctgctgggtttgatgct
gttgaagggcatctgtctccactgggtggctattctgtcaccgccagatgttttggccac
ttgaccaggcagctgatgaagctggctgggggccgggtggtgctggccctggagggaggc
catgacttgaccgccatctgtgatgcctctgaggcctgtgtttcagctctgctcagcgtg
gagctccagcctttggatgaggcagtcttacagcaaaagcccaacgtcaacgcagtgacc
acacttgagaaagtcatcgagatccagagcaaacactggagttgtgtgcagaggtttgct
gctggtttgggccgctctctgcgggaggctcaggcaggtgagactgaggaggccgagact
gtgagcgccatggccttgctgtcagtgggggctgaacaggcccaggctgctgctgcccga
gaacacagccccaggtaa
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integrated database retrieval system
