Dipodomys spectabilis (banner-tailed kangaroo rat): 122102171
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Entry
122102171 CDS
T07891
Symbol
Scn11a
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dsp04040
]
122102171 (Scn11a)
Ion channels [BR:
dsp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122102171 (Scn11a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122102171
NCBI-ProteinID:
XP_042528665
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MAERGCPVIFPDERNFRPFTAESLAAIERRRAAQARARRGSRAHAGPERPAPARPQLDLK
ASRRLPRLYGDVPSQLVARPLEDLDPFYRTHQTFMVLNKKRTIYRFSAKRALFILGPFHP
IRSLAIQISVHSLFSMFIICTVIVNCVFMARSKNSNIAEYIFTGIYILEAIIKILARGFI
LDEFSFLRDPWNWLDSFVIGTAIAASQTPVSSIRTFRVFRALKAISVVSGLKVIVGALLR
SVKKLVDVMVLTLFCLSIFALVGQQLFMGNLNQKCVKDSCAGTTDWATNETCFEKENDKE
FIMCGMWVGSRSCPNNSKCNKTRVNPDHGFTNFDNFGWSFLAMFRLMTQDSWEKLYRQTL
RTSGLYYVFFFVMVILLGSFYLLNLTLAVVTMAYEEQNHNVAAETQAKERMFQEAQQLLR
EEKEALVAMGMDRTSLNSLQASSFSPTKRKFFGKKQRQSFLLRKSRKDPSPGSDSDEEST
RNPRLLQQTKRLSQTVPVDLFDEHADPLQRQRALSAVSILTITMQEKEKSQEPCLPCGEN
MASRYLVWNCSPHWVCIKKGLRLVMMDPFTELAITICIITNTVFLAMEYHQMPEELHTIL
RTGNWVFTGIFIAEMFLKIIALDPYHYFRHGWNIFDFIVALLSFVDVMINLSNQHWSFFR
SFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFAVVGMQLFGNTFCAK
KNVTMCRAEERLCARRWHMGDFYHSFLVVFRILCGEWIENMWECMNTARWTLCIIVFLSI
MVIGKLVVLNLFIALLLNSFSNEERDGNPGGEGRQTKVQLAMVRFQKAFAFLLRTLQRIC
CQARRRQEGTMENYAAENKDMNPLVTEMKTGGFKSWEELDGLKPARKTSGPGHDRIPLAP
LAEEESDVEDLDEDNALPTTPPRAERQVCGPSQETKISTSPGELAVEIEVFPEEDTTLAI
QNPRKKSDAGSMLSECSTVDLHHGPGSLDGDTPPRKQPERCLPT
NT seq
3013 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcggctgcccggtcatcttcccggacgagcgcaacttccgcccgttcacg
gccgagtcgctggcggccatcgagcggcggcgcgcggcgcaggcccgggcgcggcggggg
tccagggcgcacgccggccccgagcgccccgcgcccgcccggccgcagctcgacctcaag
gcctcgcggcggctgcccaggctctacggcgacgtccccagccagctggtggccaggccg
ctggaggacctggaccccttctaccgcacgcaccagacgttcatggtgctgaacaagaag
aggacgatctaccgcttcagcgccaagcgggccttgtttatcctgggcccgttccacccc
atccggagccttgccatccagatctccgtgcactcgttgttcagcatgttcatcatctgc
acggtgatcgtcaactgtgtgttcatggctcgctccaaaaactccaatattgctgaatac
attttcaccgggatttacattctggaagccataataaagatactggccagaggttttatc
ctggatgagttctcgttcctcagagacccttggaactggttggattcctttgtcatcgga
acggcgatcgcagcctcacagactcccgtgtcctctatccgtaccttccgcgtgttcaga
gccttgaaggccatttccgtagtgtcaggcctgaaggtcattgtgggagccttgctgcgc
tcggtgaagaagctggtcgatgtgatggtgctcaccttgttctgtctgagcatcttcgct
ctggtgggccagcagctgttcatgggaaacctgaaccagaagtgtgtcaaggatagctgt
gcgggcaccaccgactgggccaccaacgagacttgctttgaaaaagaaaatgacaaagaa
ttcataatgtgtggcatgtgggttggtagcagatcttgtcccaataactctaaatgcaac
aaaactcgagtgaatcctgaccatggcttcacgaactttgacaactttggctggtctttt
cttgccatgttccggctcatgacccaggattcttgggagaaactgtaccgacagacgctg
cgcacgtccgggctgtattacgtgttcttcttcgtgatggtcatcctgctgggctccttc
tacctgctcaacctcaccctggctgtggtcaccatggcgtatgaggagcagaaccacaac
gtggccgccgagacccaggccaaggagaggatgttccaggaggcccagcagctgctgcgg
gaggagaaggaggcgctggtcgccatgggcatggaccggacgtcgctgaactccctacaa
gcctcatccttttcccccacgaaaaggaagttcttcggcaagaagcaaaggcaatcgttc
ttgttaaggaaatccaggaaagacccctctccagggtcagattccgatgaagaatctacc
agaaatccacgccttctccagcaaaccaaacgtctgtcccagactgtgcccgtggatctg
tttgatgagcatgccgaccctctgcagagacagagggcgctgagcgccgtgagcattctc
accatcaccatgcaagaaaaagaaaaatcccaggagccttgtctcccctgtggggaaaac
atggcgtccagatacctggtgtggaactgcagcccacactgggtgtgcatcaagaagggg
ctgcgactggtcatgatggaccccttcaccgaactggccatcaccatctgcatcatcacc
aacaccgtcttcctagccatggagtaccaccagatgccggaggagctgcacaccatcctg
agaacgggcaactgggttttcactggcattttcatcgccgagatgttcctgaagatcata
gcactcgatccctaccactacttccgccatggctggaacatcttcgatttcatcgttgct
cttctgagctttgtcgacgtcatgatcaacctctccaaccagcactggtctttctttcgc
tccttcagagtgctgcgggtcttcaagctggccaagtcctggcccaccctgaacacactc
atcaagatcatcggccactcggtgggcgcgctgggcaacctgacggtggtgctggccatc
gtggtgtttatcttcgccgtggtgggcatgcagctcttcggcaatactttctgtgccaag
aagaacgtgacgatgtgcagagcggaggagcgcctgtgcgcccggcgctggcacatgggt
gacttctaccactccttcctggtggtgttccgcatcctgtgtggggagtggatcgagaac
atgtgggaatgcatgaacaccgcgcggtggacgctgtgcatcattgtcttcctgtccatc
atggtgatcgggaagcttgtggtgctcaacctcttcatcgccttgctgctcaactccttc
agcaacgaggagagagacggaaacccgggcggcgagggcaggcaaaccaaggtccagctg
gccatggtgcgcttccagaaggcctttgcctttctgctccgaactctccagcgtatctgc
tgccaggcacgcaggaggcaagaagggacgatggaaaactatgctgccgagaacaaagac
atgaatcctttggtcactgagatgaaaacgggaggattcaagtcctgggaggagctggat
gggctcaaaccagcccggaagacttctggcccggggcacgatcggatcccactggcccca
ctggcagaggaagaatcggatgtggaagatttggatgaggataatgccttgcccaccact
ccacccagggctgaaagacaggtctgtggtccttctcaggagaccaaaatatccaccagc
ccaggagaactggcggtggaaattgaagtgtttcccgaagaagacactactttggccata
cagaatccacggaagaagtcggacgcgggcagcatgctctcggagtgcagcactgtggac
ctgcaccatggcccggggtccctggacggtgacaccccccccagaaagcagcccgagcgc
tgtctgcccacag
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