KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122102173
Entry
122102173         CDS       T07891                                 
Symbol
Wdr48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    122102173 (Wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsp03400]
    122102173 (Wdr48)
DNA repair and recombination proteins [BR:dsp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     122102173 (Wdr48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 WDR54 Beta-prop_IP5PC_F WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 Nucleoporin_N RAWUL WD40_like Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 122102173
NCBI-ProteinID: XP_042528667
LinkDB
Position
Unknown
AA seq 677 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDAVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLG
TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAVWVATTKSTVNKWTLKGIHNFRASGDYDNDCTHPITPLCTQPDQTLKGG
ASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLECWPRTHAN
PVDEEENEVSHVNGEPEARVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPQASSGAKTLKKDRLSASDMLQVRKIMEHV
YEKIINLDSESQTTSSSNNEKTGEQEKEEDLAVLAEEKIELLCQDQVLDPNMDLRTVKHF
VWKSGGDLTLHYRQKCA
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggcccatcaccggcagaacacggccgggcggaggaaagtgcaggtttcctatgtc
attcgcgatgaagtggagaaatacaatcgcaacggtgtgaacgccctgcagttggaccct
gcgctcaatcgacttttcacagccggccgagactctatcataagaatatggagtgtcaat
caacacaagcaagacccatatatagcatcaatggagcaccacaccgattgggtaaatgac
gctgtgctgtgctgtaacgggaaaaccttaatatccgcttcgtccgacaccaccgtgaaa
gtgtggaacgcgcacaagggcttttgcatgtccacgttacgcacacacaaggattacgtg
aaggccctggcgtacgccaaggacaaggagttggtagcctcggccggattggacagacaa
atattcctttgggatgtgaatactctcaccgctctaaccgcctcaaataatactgtcaca
acttcttctttgagtgggaacaaagattccatctacagcctggccatgaaccagctgggc
accatcatcgtgtcggggtccacagagaaggttttgcgggtgtgggacccgaggacctgc
gcgaagctgatgaagctcaagggccacacggacaatgtgaaggcattgctgctgaaccgg
gacggcacccagtgtctgtctggcagctccgacggaacaatccgcctgtggtcgctgggc
cagcagaggtgcatcgccacataccgcgtccacgacgaaggcgtctgggccctgcaagtg
aacgaggccttcacgcacgtgtactcgggtgggcgcgaccgcaagatctactgcacggac
ctgagaaaccccgacatccgcgtgctgatttgcgaagaaaaagcacccgtgctcaagatg
gagctggacagatccgccgacccgccccctgccgtctgggtggccacaacgaagtctaca
gtgaacaaatggacgctgaaaggcatccacaatttccgagcctcgggggactacgacaac
gactgcacacaccccatcacacccctgtgcacccagcccgaccagaccctcaaagggggc
gctagcatcattcagtgccacattctcaatgataagcggcacatattgaccaaagacacc
aacaataacgtggccttctgggatgtcctgaaggcatgtaaagttgaagatctgggcaaa
gtggattttgaagatgaaattaagaagagatttaaaatggtgtacgtgccaaattggttc
tcagtagacttaaagacggggatgctgaccattactttggatgagagtgactgctttgct
gcatgggtatccgcgaaagatgccggcttcagcagccctgacggctcggatccaaagttg
aacctgggtgggctgctgctgcaggcgctcctcgagtgctggcctcggacacacgcgaac
ccagtggatgaggaggagaacgaggtcagccacgtgaacggggagccggaggcccgcgtg
cagaagggcaacgggtacttccaggtgccgccccacacccccgtgatcttcggcgaggct
ggaggccgcaccctgttcaggctgctctgccgggactcgggtggcgagacggagtccatg
ctgctcaacgagacggtgccgcagtgggtgatcgacatcacggtggataaaaatatgccc
aagttcaacaaaattcctttctacctccaaccgcaagcatcttcgggcgcaaaaacctta
aaaaaagaccggctgtcagccagcgacatgctgcaggtgcgcaagatcatggagcacgtg
tacgagaagatcatcaacctggacagcgagtcccagaccaccagctcatccaacaacgag
aagacgggggagcaggagaaggaggaggacctcgccgtgctggccgaggagaaaatcgag
ctgctgtgccaggaccaagtgctggacccgaacatggacctgcgcacggtgaagcacttc
gtgtggaagagcggcggcgacctcaccctgcactaccgtcagaagtgcgcctga

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