Dipodomys spectabilis (banner-tailed kangaroo rat): 122102207
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Entry
122102207 CDS
T07891
Symbol
Chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122102207 (Chd5)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122102207 (Chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
122102207
NCBI-ProteinID:
XP_042528723
LinkDB
All DBs
Position
Unknown
AA seq
1955 aa
AA seq
DB search
MRGPLGTEEELPRLFAEEMENEDEMSEEEDGGLDAFEDFFPMEAVSLPKKKKPRKLKESK
SKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKRKKKLKEKKERKAKRKKKDEDE
DDNDDGCLKEPKSSGQLMAEWGLDNVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQVPQPMPIR
KAKTKEGKGPGVRKKIKGSKDGKKKGKGKKVAGLKFRFGGISNKRKKGSSSEEDEREESD
LDSASIHSSSVRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDEEEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDVESEMPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGEVHYLIKWKDLSYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLL
KKGKKLKDEKQEKPPPDTPIVDPTVKFDKQPWYMDSTGGTLHPYQLEGLNWLRFSWAQGT
DTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPEFYVVT
YTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSI
EWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFN
NLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKY
YKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSL
VKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLR
QEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ
NKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEE
LFKDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDD
AAISKLLDRNQDATEDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDY
WEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSQWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPESKKLPGEVISDPNTPVPASPAHLP
PAPLGLPDKMEAQLGYLDEKEQGLQKPEKALDPQALPAALDRAEAEDKHESSDSKDRGRE
ERPEEAEKAQPSPEQLLKDDAPSEKEKVLDKLELSLSHSRGDGSDFRPDDPKAEEKETSE
TQQNGDREEDEEGKKEDKSGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRR
HDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQA
LVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHK
VLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGS
SQMYNSSFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgctgaggagatggag
aacgaggacgagatgtcagaagaggaggatggtggccttgatgcctttgaggatttcttc
cccatggaggctgtgagccttcccaagaagaagaaacccaggaagctcaaggagagcaag
tccaaggggaagcggaagaagaaagaggggagcaatgatgagctatcagaaaatgaggag
gatctggaagagaagtcagagagtgagggtagtgactactccccgaacaagaagaggaag
aagaaactgaaggagaagaaggagagaaaagccaaacgcaagaagaaggatgaagacgag
gatgataatgatgatggatgcttaaaggagcccaagtcttcagggcagctcatggcagag
tggggcctggacaacgtagactatctgttctccgaggaggactaccacacgctgaccaac
tacaaggcctttagccagttcctccggccactcatagccaagaagaacccaaagatccct
atgtccaaaatgatgactgtcctgggtgccaaatggcgggaattcagtgccaacaaccct
tttaagggcagctctgcggcggcggcggcagcggcggtggctgcagctgtggagacggtc
accattgcccctcctctggccatcagcccccagcaggtgccccagcccatgcccatccgc
aaggccaagaccaaagagggcaagggccctggagtaaggaagaaaatcaaaggctccaaa
gatgggaagaagaaggggaaggggaaaaaagtggctgggctcaagttccgctttggaggg
atcagcaacaagaggaagaaaggctcctcgagtgaggaggatgagcgggaggagtccgat
ttggacagtgccagcatccacagctcgtcagtgcgctctgagtgctctgcagccctgggc
aagaagagcaagagaaggcgcaagaagaagaggattgatgatggtgatggctacgagaca
gaccaccaggattactgtgaggtgtgccagcagggaggggagatcatcctgtgtgacacc
tgcccaagggcctaccacctggtctgccttgatccagagctggagaaggctccggagggc
aagtggagctgccctcactgtgagaaggaggggatccagtgggagccaaaggacgacgat
gaggaggaggaggagggcggctgtgaggaggaggaagatgaccacatggagttctgccgc
gtctgcaaggatggcggcgagctgctctgctgtgacgcctgtccctcctcctaccacctg
cactgcctcaacccgccgctgccggagatcccaaatggtgaatggctctgcccgcgctgt
acttgtcccccactgaagggcaaagtccagcggatcctccactggcggtggacagagccc
ccagcccctttcatggtggggctaccaggaccagatgtggagtcggagatgcccccaccc
aaacccctggagggtatcccagagagagagttctttgtcaagtgggctggactctcctac
tggcactgctcctgggtgaaggagctgcagctggagctctaccacacggtgatgtatcgc
aactaccaaagaaagaatgacatggatgagccgccgcccttcgactatggctctggcgat
gaggacggcaagagtgagaagaggaagaacaaggacccactgtatgccaagatggaggag
cgcttctatcgctacggcatcaagccagagtggatgatgatccaccgcatcctgaaccac
agcttcgacaagaagggggaagtccactacctcatcaagtggaaggacctgtcctatgac
cagtgcacctgggagattgatgacatcgatatcccctattatgacaacctgaagcaggcc
tactggggtcacagggagctgatgctgggagaggatgccaggctgcctaagcggctgctc
aagaagggcaagaagttgaaggatgagaaacaggagaagccgccgccagatacgcccatt
gtggaccccacggtgaagttcgacaagcagccatggtacatggactccactggcggcaca
ctgcacccgtaccagctggagggcctcaactggctgcgcttctcctgggcccagggcacc
gacaccatcctggcggacgagatgggtctgggcaagactgtgcagaccatcgtgttcctg
tactcgctgtataaggagggccactccaaggggccctacctggtcagtgcgcccctgtcc
accatcatcaactgggaacgggagtttgagatgtgggcgcctgagttctacgtggtcacc
tacacgggagacaaggagagccgctcggtgatccgagaaaatgagttctcctttgaggac
aacgccattcgcagtgggaagaaggtgttccggatgaagaaagaagtacagatcaaattc
cacgtcctgctcacctcctatgagctcatcaccatcgaccaggccatcctgggctccatt
gagtgggcctgcctggtggtggacgaggcccaccgactcaagaataaccaatctaaattc
ttcagggtcttgaacagctacaagatcgattacaagctgctcctcacggggactccgctt
cagaacaacctggaggaactcttccatctcctcaacttcctgactccagagaggttcaac
aatctggagggcttcctggaggagtttgccgacatctccaaggaagaccagatcaagaag
ctgcatgacctgctggggccacacatgctgcggcggctcaaggccgacgtgttcaagaac
atgccggccaagacggagctgatcgtccgcgtagagctgagccagatgcagaagaagtac
tacaagttcatcctcacgcggaacttcgaggcgctgaactccaaggggggcgggaaccag
gtgtcgctgctcaacatcatgatggacctcaagaagtgctgcaaccacccctatctgttc
cccgtggctgccgtggaggcccccgtcctgcccaatggctcctacgatggcagctctctg
gtcaagtcttcggggaagctcatgctcctgcagaagatgctcaagaagctgcgggacgaa
gggcaccgggtgctgatcttctcccagatgaccaagatgttggatcttctggaggacttc
ctggagtatgagggctacaagtacgagcgcatcgatggcggcatcacgggcggtctgcgg
caggaggccatcgacagattcaatgcccctggagcccagcagttctgcttcctgctttca
acccgcgcaggtggcctgggcatcaacctggccacagcggacacggtcatcatctatgac
tcggactggaacccccacaacgacatccaggccttcagccgtgcccaccgcattgggcag
aacaagaaggtgatgatctaccgctttgtgacgcgggcctcggtggaggagcgcatcacg
caggtggccaagcgcaagatgatgctcacacacctggtggtgcggccgggcctgggctcc
aagtcgggctccatgaccaagcaggagctggacgacattctcaaattcggcacggaggag
ctcttcaaggatgacgtggagggcatgatgtcccagggccagaggcctgtcacgcccatc
cctgacgtgcagtcctccaagggcggagctctggctgccagcgcaaagaaaaagcacggg
agcaccccaccaggtgacaacaaggacgtggaggacagcagcgtgatccactatgacgat
gcggccatctccaagctgctggaccggaaccaagatgccacggaagacacggagctgcag
aacatgaacgagtacttgagctccttcaaggtggcgcagtatgtggttcgggaggaagac
ggcgtggaggaggtggagcgggaggtgatcaagcaggaggagaacgtggaccccgactac
tgggagaagctgctgcggcaccactacgagcagcagcaggaggacctggcgcgcaacctg
ggcaagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcgcaggaggaccag
gagtggcaggacgagctttcagataaccagtccgaatattccatcggctctgaggacgag
gatgaggacttcgaggagaggccagaagggcagagtgggcggcgacaatccagaaggcag
ctgaagagcgaccgagacaagcccctgccacctctgctggctcgagtgggtggcaacatc
gaggtgctgggcttcaacgcccgccagcggaaggcctttctgaacgccatcatgcgctgg
ggcatgcccccccaggacgccttcaactcccagtggctggtgcgcgacctccgtgggaag
agtgagaaagaatttcgagcctacgtgtccctcttcatgcggcacctgtgtgagccgggg
gctgatggcgccgagacctttgcggacggcgtgccccgggagggcctgtccagacagcac
gtgcttacccgcatcggggtcatgtcactggttaggaagaaggttcaggagtttgagcac
gtcaacgggaagtacagcaccccagacctgattcccgaggggccggagagcaagaagctg
cctggggaggtcatctcggaccccaacacgccggtgcccgccagccctgcccacctcccg
ccagccccgctgggtctgccagacaaaatggaagcccagttgggctacctggatgagaag
gagcaagggctgcagaagccagagaaggccctggacccccaggccctgcccgcagccctg
gacagagcagaggcggaggacaagcatgaaagctcggacagcaaggaccgaggccgagag
gagcggccagaggaggcagagaaggcccagccctccccggagcagctgctgaaagacgac
gcgccttctgagaaggagaaagttctggacaagctggagctgagcctgagccacagcaga
ggggatggcagtgatttcaggccagatgaccccaaggccgaggagaaggagacctcggag
acacagcaaaatggtgacagagaggaggatgaggaggggaagaaggaagataagagtggg
aagttcaaattcatgttcaatatcgcagacggaggcttcacagagctgcacacactatgg
cagaacgaggagcgggctgccgtgtcctcgggaaaaatctatgacatctggcaccggcgc
catgactattggctgctggcgggtatcgtgacgcatggctatgcccgctggcaggacatc
cagaatgacccgaggtacatgatcctcaatgagcccttcaagtccgaggtccataaggga
aactacttggagatgaagaacaagttcctcgcccgcaggttcaagctgctggagcaggcg
ctggtcattgaggagcaactgcggagggctgcgtacctcaacatgacccaggaccccaac
caccccgccatggccctcaatgcccgcctggctgaggtggagtgccttgctgagagtcac
cagcacctgtccaaggagtccctggctgggaacaagcctgccaacgccgtcctgcacaag
gtcttgaaccagctggaggagttgctgagtgatatgaaggcggacgttacacggctgcct
tccatgctgtctcggatccccccggtggccgctcgcctgcagatgtctgagcgtagtatc
cttagccgcctgaccaaccgtgccggtgaccccaccattcagcagggcgctttcggctcc
tcccagatgtacaacagcagctttgggcccaacttccggggccctggaccgggagggatt
gtcaactacaaccagatgcccctggggccctatgtgactgatatctag
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integrated database retrieval system
