Dipodomys spectabilis (banner-tailed kangaroo rat): 122102266
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Entry
122102266 CDS
T07891
Symbol
Nbn
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03440
Homologous recombination
dsp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122102266 (Nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
122102266 (Nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsp03032
]
122102266 (Nbn)
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122102266 (Nbn)
DNA replication proteins [BR:
dsp03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
122102266 (Nbn)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
122102266 (Nbn)
BRCA1-C complex
122102266 (Nbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
RTT107_BRCT_5
Yop-YscD_cpl
Tom37
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
122102266
NCBI-ProteinID:
XP_042528813
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MWKLLRAPAPAPGEPYRLLTGVEYIVGRKNCAILIEDDQSISRNHAVLTANFSVTNLSQT
DDIPVLTIKDNSKYGTFVNEEKMQNGLSQTLKTGDRVTFGVFESKFRVEYEPLVVCSSCL
DISGKTALNRAVLQLGGLTINNWTEECTHLVMVSVKVTIKTICALICGCPIVKPEYFTEF
IKAIQSKKQPPQIESFYPPIDEPSIGNKNIDLSRRQERKHIFQGKTFVFLNDKQHKKLSS
AVVFGGGEARLIMEENEEEDSFFSAPGTCVVDTRVTNTQILIPDSQKKWIHSIVDMLQRQ
GLRPIPEAEIGLAVIFMTTKGYCDPQGQPSTELKTTPGPSLSQDLSASEKIIPSAPVNGT
LIMNGSESEQLDACIYLSEMSKEVKISGMGQKFRMLSQETSTTKEPFPNNSNNNTVSNTL
VKTKFSNCQLSPTKVLPVNKSRASASQQQLNSIKNYFQPSSKKRERDEENQELSSSKSAR
IEMSCSLLEQTQPTTPSLWKNKAQDSSQDEPMGKESDNLFSDDVDLKSDVKNSASKFLSS
EKRKIDISAIEDEILENLLKDTKPELENNVKVEKPEEDGNIRKKPKMDIETNNSNDETIP
ERSNISVNDELQDSSEMLPRKVLLTEFRSLVVSNTTSRNLCGVNNNYGQLKNFKKFKKVI
YPGAGKLPRIIGGSDLIPHHARKNAELEDWLKQEMEVQKQHAKEESLADDLFRYNPNVKR
RR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagttgctccgggccccggccccggcccccggagaaccatacagacttttgact
ggtgttgagtacattgttggaaggaaaaactgtgctattctaattgaagatgatcagtca
atcagtcgaaatcatgctgtgttaacagctaacttctctgtaaccaacttgagtcaaaca
gatgatattcctgtattaacaataaaagataattctaaatatggcacatttgttaatgag
gaaaaaatgcagaatggcctttcccaaacactaaaaacaggagatagagttacctttgga
gtgttcgaaagtaaattcagagtagagtatgagcctttggttgtatgctcttcttgttta
gatatctctgggaagacagctttaaatcgagctgttttgcaacttggaggacttactata
aacaactggacagaagaatgtactcaccttgtcatggtatcagttaaagttaccattaaa
acaatatgtgcacttatttgtggatgtccaattgtgaagccagaatattttactgaattt
atcaaagcaattcagtccaagaaacagcctccgcaaattgaaagtttttatccacctatt
gatgaaccatctattggaaataagaatattgatctatcaagacgacaggaaagaaagcat
atcttccagggaaaaacatttgtatttttaaatgacaaacagcataagaagttaagttca
gcagttgtttttggtggcggtgaagcaagattgatcatggaagaaaatgaagaagaagat
agtttcttttcagctccaggaacctgtgttgttgatactagagtaacaaatacacagatc
ttaattcctgactctcagaaaaaatggattcattcgattgtagacatgctccaaagacag
ggtctcagacccattcctgaagcagaaattggattggcagttattttcatgactactaag
ggttactgtgatcctcagggccaacccagtacagaattaaagacaacgccagggccaagc
ctttctcaagacttgtcagccagtgaaaaaataattccaagtgctcctgtgaatggtaca
ttgatcatgaatggctcagaatcagagcaactagatgcttgtatatatttgagtgaaatg
tcaaaagaagtaaaaatttccggaatgggacagaaatttagaatgctttcgcaagaaaca
tctactacaaaggagcccttcccaaataatagtaataataatacagtatcaaatacttta
gttaaaactaagttttcaaactgtcagctttcaccaactaaagtcctacctgtaaataaa
agtagagcttcagcttctcaacagcagctgaattcaatcaaaaactactttcaaccatct
tctaaaaaaagggaaagggatgaagaaaatcaagaattgtcttcatccaagtcagcaaga
atagaaatgtcttgttctcttttagaacagacacaaccaacgacaccctcattgtggaaa
aataaggcgcaagattcatctcaggatgagcccatgggcaaagaatcagataacttattt
tcagatgatgtagatttaaaatctgatgtgaaaaattctgccagtaaatttctttcttca
gaaaaaagaaaaattgatatttcagccatagaagatgagatattagaaaatttactcaag
gacacaaagccagagttagaaaataatgtgaaagttgaaaagccagaggaagatgggaat
attagaaaaaagccaaagatggatatagaaacaaacaactctaatgatgaaacaataccg
gaaaggagtaacatatctgtcaatgatgaacttcaggacagtagtgaaatgcttccaaga
aaggtactactgactgaatttagatcactagtggttagtaacaccacttccagaaatctg
tgtggggtaaataataattatggtcaactcaagaatttcaagaagtttaaaaaggtcata
tatcctggagcaggaaaacttccacgcatcattggaggatctgatctaatacctcatcat
gctcgaaagaatgcagaattagaagactggctgaagcaggaaatggaggtacaaaaacaa
catgcaaaggaagagtctcttgctgatgacctctttagatataatcctaacgtcaaaagg
agaagataa
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