Dipodomys spectabilis (banner-tailed kangaroo rat): 122102315
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Entry
122102315 CDS
T07891
Symbol
Ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122102315 (Ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122102315 (Ubr5)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122102315 (Ubr5)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
HECT type E3
122102315 (Ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
122102315
NCBI-ProteinID:
XP_042528880
LinkDB
All DBs
Position
Unknown
AA seq
2798 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNLNSHPPLNVLEQATIKQCVVGPNHAAF
LLEDGRVCRIGFSVQPDRLELGKPDNNDGSKLNSNSGAGRTSRPGRTSDSPWFLSGSETL
GRLAGNTLGSRWSSGVGGSGGGSSGRSSAGARDSRRQTRVIRTGRDRGSGLLGSQPQPVI
PASVIPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASE
SYLPGEDLMSLLDADIHSAHPSVIIDADAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLP
LERDSELLRERESVLRLRERRWLDGASFDNERGSTSKEGEPNLDKKNTPVQSPVSLAEDL
QWWPDKDGTKFMCIGALYSELLAVSSKGELHQWKWSESEPYRNAQNPSLHHPRATFLGLT
NEKIVLLSANSIRATVATENNKVATWVDETLSSVASKLEHTAQTYSELQGERIVSLHCCA
LYTCAQLENNLYWWGVVPFSQRKKMLEKARAKNKKPKSSAGISSMPNITVGTQVCLRNNP
LYHAGAVAFSISAGIPKVGVLMESVWNMNDSCRFQLRSPESLKSMEKANKTTEAKPESKQ
EPVKTEMGPPPSPASTCSDASSIASSASMPYKRRRSTPAPKEEEKVNEEQWSLREVVFVE
DVKNVPVGKVLKVDGAYVAVKFPGTSSNTNCQSSSGPDADPSSLLQDCRLLRIDELQVVK
TGGTPKVPDCFQRTPKKLCIPEKTEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQ
ENNFPTSSIAFLGQNERNVAIFTAGQESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPP
ISSLGMGVHSLVNLPANSTIKKKAAIIIMAVEKQTLMQHILRCDYEACRQYLMNLEQAVV
LEQNLQMLQTFISHRCDGNRNILHACVSVCFPTSNKETKEEEEAERSERNTFAERLSAVE
AIANAISVVSSNGPGNRAGSSSSRSLRLREMMRRSLRAAGLGRHEAGASSSDHQDPVSPP
IAPPSWVPDPPAMDPDGDIDFILAPAVGSLTTAATGSGQGPSTSTIPGPSTEPSVVESKD
RKANAHFILKLLCDSVVLQPYLRELLSAKDARGMTPFMSAVSGRAYPAAITILETAQKIA
KAEVSSSEKEEDVFMGMVCPSGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCG
LLESLCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKSARLDLLYRLLT
ATNLVTLPNSRGEHLLLFLVQTVARQTVEHCQYRPPRIREDRNRKTASPEDSDMPDHDLE
PPRFAQLALERVLQDWNALKSMIMFGSQENKDPLSASSRIGHLLPEEQVYLNQQSGTIRL
DCFTHCLIVKCTADILLLDTLLGTLVKELQNKYTPGRREEAITVTMRFLRSVARVFVILS
VEMASSKKKNNFIPQPIGKCKRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLA
STSIDAMQGSEELFSVEPLPPRPSSDQSSSSSQAQSSYIIRNPQQRRISQSQPVRGRDEE
QDDIVSADVEEVEVVEGVAGEEDHHDEQEEHGEENAEAEGQHDEHDEDGSDMELDLLAAA
ETESDSESNHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQ
SDDIEQETFMLDEPLERTTNSSHASGAAQAPRSMQWAVRNTQHQRAASTAPSSTSTPTAS
SAGLIYIDPSNLRRSGTISTSAAAAAAALEASNASSYLTSASSLARAYSIVIRQISDLMG
LIPKYNHLVYSQIPAAVKLTYQDAVNLQNYVEEKLIPTWNWMVSIMDSTEAQLRYGSALA
SAGDPGHPNHPLHASQNSARRERMTAREEASLRTLEGRRRATLLSARQGMMSARGDFLNY
ALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQLERKRTREL
LELGIDNEDSEHENDDDTNQSATLNDKDDDSVPAETGQNHPFFRRSDSMTFLGCIPPNPF
EVPLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSASSGKCLMEVTMDRNCLEVLPT
KMSYAANLKNVMNMQNRQKKEGEEQNMQAEEAENSKPGPSAHDLAAQLKSSLLAEIGLTE
SEGPPLTSFRPQCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEV
KESKFRREMEKLRNQQSRDLSLEVDRDRDLLIQQTMRQLNNHFGRRCATTPMAVHRVKVT
FKDEPGEGSGVARSFYTAIAQAFLSNEKLPNLDCIQNANKGTHTSLMQRLRNRGERDRER
EREREMRRSSGLRAGSRRDRDRDFRRQLSIDTRPFRPASEGNPSDDPDPLPAHRQALGER
LYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELIIAHGRENGADS
ILDLGLLDSSEKVQENRKRHGSSRSVVDMDLDDTDDGDDNAPLFYQPGKRGFYTPRPGKN
TEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQ
LILASQSSDADAVFSAMDLAFAIDLCKEEGGGQVELIPNGVNIPVTPQNVYEYVRKYAEH
RMLVVAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESG
ENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQH
LPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccatccatttcgtggttcacccgctgccggggaccgaggaccagctcaatgac
aggttacgagaagtttcagagaaactgaacaaatataatttaaacagccatccccctttg
aatgtattggagcaggctactattaaacagtgtgtggtgggaccaaatcatgctgctttt
cttcttgaggatggtagagtttgcaggattggtttttcagtacagccagatagattggaa
ttgggtaaacctgataataatgatgggtcaaagttgaacagcaactcgggagcagggagg
acttcaaggcctggtaggacaagtgactctccatggtttctctcagggtctgagaccctg
ggcaggctagcaggcaacaccttgggaagccgttggagttcaggagttggtggaagtgga
ggaggatcctctggtaggtcatcagctggagctcgagattcccggcggcagactcgagtc
attcgaactggacgtgatagaggatctggacttttaggcagtcagccccagccagtgatt
ccagcatccgttattccagaggagctgatctcacaggcccaagttgttttacaaggcaaa
tccagaagtgtaattattcgagaattacaacgaacaaatcttgatgtaaaccttgctgta
aataatttacttagccgggatgatgaagatggagatgatggagatgatacagccagtgaa
tcttatttacctggagaggatcttatgtctcttcttgatgctgatattcattctgctcat
ccaagtgtcattattgatgcggatgccatgttttctgaggacattagctattttggttac
ccttcttttcgtcgttcatcactttccaggctaggctcatctcgagttctccttcttccc
ttagagagagactctgagctgttgcgtgaacgtgaatccgttttacgtttacgtgagcga
aggtggcttgatggagcctcatttgataatgagaggggctctaccagcaaggaaggagag
ccaaacttggataagaagaacacaccagttcaaagtccagtatctctagcagaagactta
cagtggtggccagataaggatggaacaaaattcatgtgtattggggctctgtattctgag
cttctggctgttagcagtaaaggagaactacatcagtggaagtggagtgagtctgagcct
tacagaaatgcccagaatccttcattacatcatccaagagcaacatttttggggttaacc
aatgaaaagatagtcctcctgtctgcaaatagtataagagcaactgtagctacagaaaat
aacaaggttgctacctgggtggatgaaacattaagttctgtggcttccaaattagagcac
actgcacagacttactcagaacttcaaggagaacgcatagtttctttacattgctgtgct
ctttatacctgcgctcagctggagaacaatttatattggtggggggtagtcccttttagt
caaaggaagaaaatgctagagaaagctagagcaaaaaacaaaaagcccaaatccagtgct
ggtatttcctccatgccaaatatcactgttggtacacaggtatgtttaagaaataatcct
ctttatcatgccggagcagttgcattttcaattagtgctgggattccgaaagttggtgtc
ttaatggagtcagtttggaatatgaatgacagctgtagatttcaacttagatcccctgag
agcctgaaaagcatggaaaaagctaacaaaactactgaagctaagcctgaaagtaagcag
gaaccagtgaaaacagaaatgggtcctccaccatctccagcatctacatgcagtgatgcc
tcctcaattgcaagcagtgcgtcaatgccatacaaacgacgtcggtcaacccctgctcca
aaagaagaggaaaaagtgaatgaagagcagtggtctcttcgggaagtcgtttttgtggaa
gatgttaagaatgttcctgttggcaaggtgctaaaagtggatggtgcctatgttgctgta
aagtttccaggaacatccagtaatacaaactgtcagagcagctctggtccagatgctgac
ccttcctctctccttcaggattgtaggttacttagaatcgatgaacttcaggttgtcaaa
actggtggaactcccaaagtgcccgactgttttcagaggacacctaaaaagctttgtata
cctgaaaaaacagaaatattagcagtgaatgtagattccaaaggtgtacatgctgttttg
aagactggaaactgggtacggtactgtatctttgatcttgcgacaggaaaagctgaacaa
gaaaataatttccctacaagcagcattgcctttcttggtcagaatgagaggaatgtagcc
attttcactgctggacaggaatctcccattattcttcgagatggaaatggtactatctat
ccaatggccaaagattgcatgggaggaataagggatcctgattggcttgatcttccacct
attagtagtcttggaatgggtgtgcattctttagtaaaccttcctgctaattcaacaatc
aaaaagaaagcggctattatcatcatggctgtagagaaacaaaccttaatgcaacacatt
ctacgctgtgattatgaggcttgtcggcagtatcttatgaatcttgagcaagctgttgtt
ttagagcagaatttacagatgctacagacgttcattagtcacagatgtgatggaaatcgg
aatatcttacatgcttgtgtatcagtttgctttccaaccagtaataaggaaactaaagaa
gaagaggaagcagaacgctccgaaagaaatacatttgcagaaaggctttctgctgtagag
gctattgcaaatgcaatatcagttgtttccagtaatggcccaggtaatcgggctggatct
tcaagtagtcgaagtttgagattacgagaaatgatgagacgttcattgagagcagctggt
ttgggtagacatgaggctggagcttcatccagtgaccaccaggatcctgtatcacccccc
atagctccccctagttgggttcctgaccctcctgcaatggatcctgatggtgacattgat
tttatcctggcccccgctgtgggatctcttaccacagcagcaactggcagtggtcaagga
ccaagcacctccaccattccaggtccttccacagaaccttctgtagtggaatccaaagat
cgaaaggcaaatgcacattttatactaaagttgttatgtgacagtgtggttctgcaaccc
tacctacgagaactcctttctgccaaagatgcaagaggaatgactccatttatgtcagct
gtaagtggccgagcttaccctgctgctattaccatcttagaaacagctcagaaaattgca
aaagctgaagtatcctcaagtgaaaaagaagaagatgtatttatgggaatggtttgccca
tctggtaccaatcctgatgactctcctctatatgtcttatgttgtaatgacacctgcagc
tttacatggactggagcagagcacataaaccaagatatttttgaatgtcgaacttgtggt
ttgctggagtcactttgttgttgtacagaatgtgcaagggtttgtcataaaggtcatgat
tgcaaactcaaacgaacatcaccaacagcctattgtgattgttgggaaaaatgtaaatgt
aaaactctaattgctggacagaaatctgctcgtcttgatctactttatcgtctgctcact
gctactaatctggtcactctgccaaatagtaggggagagcacctcctgctatttctggtg
cagacggtggccaggcagacagtagagcattgtcagtataggccgcctcgaatcagggaa
gatcggaaccgaaaaacagctagtcctgaagattcagatatgcctgatcatgatttagag
cctccaaggtttgcccagcttgctttagagcgtgttctacaggattggaatgccttgaaa
tctatgatcatgtttgggtcacaggagaataaagaccctttgagtgccagtagtaggata
ggacatcttttgcccgaagagcaagtatacctaaatcagcaaagtggcactattcggctg
gactgtttcactcattgccttatcgtcaagtgcacagcagatattttgcttttagatact
ctactaggtacattagtgaaagaactccaaaacaaatatacacctgggcgccgagaagaa
gctatcactgtgacaatgaggtttctacgttctgtagcaagagtgtttgtcattcttagt
gtagaaatggcatcatccaaaaagaaaaacaactttattccacagcccattggaaaatgt
aagcgtgttttccaagcactgctaccttatgctgtagaagaattgtgcaatgtagctgaa
tcattgattgttcctgtcagaatggggattgcccgcccaactgcaccatttactttggcc
agtactagcatagatgccatgcaaggcagtgaagaactgttttcagtagaaccactacct
ccacgaccatcatcagatcagtctagcagctccagtcaggctcagtcatcctacatcatc
cgcaatcctcagcagaggcgcatcagccagtcccagcctgttagaggtagagatgaagaa
caggatgacattgtttcagcagatgtggaagaggtggaggtggtggaaggtgtggctgga
gaagaagatcatcatgatgagcaggaagagcatggagaagagaatgctgaagccgaagga
cagcatgatgagcatgacgaagatggtagtgacatggagctggatttgttagctgctgct
gagacagaaagtgacagtgaaagtaaccatagcaaccaagataatgctagtgggcgcaga
agtgttgtcactgcagcaactgctggctctgaagcaggagcaagcagtgttcctgccttt
ttttctgaagacgattctcagtcaaatgactcaagtgattctgatagcagcagtagtcag
agtgacgacatagaacaggagacttttatgcttgatgaacctttagaaagaaccacaaat
agctcccatgccagtggtgctgcccaagctccccgttccatgcagtgggctgttcgcaac
acccagcatcagcgagctgccagcacagccccttccagcacatccacgcccacagctagt
tctgcgggtttgatttatattgatccttcaaatttacgccggagtggtaccatcagtaca
agtgctgcagctgcagcagctgctttggaagctagcaatgctagcagctacttaacatct
gcaagcagtttagccagggcttacagcattgtcatcagacaaatctcggacttgatgggc
ctcattcctaagtataatcacctagtatactctcagattccagcagctgtgaaattgact
tatcaagatgcagtaaacttacagaactacgtagaagaaaagcttattcccacctggaac
tggatggtcagtattatggattctactgaagctcaattacgttacggttctgcattagca
tctgctggtgaccccggacatccaaaccatcctcttcatgcttctcagaattcagcccga
agagagagaatgactgcacgcgaagaggctagcttacgaacccttgaaggaagacgacgt
gccacattgcttagtgcccgtcaaggaatgatgtctgctcgaggagacttccttaattat
gctctttctttaatgcggtctcataatgacgagcattctgatgttcttccagttttggat
gtttgctcattgaagcatgtggcatatgtttttcaagcccttatatattggattaaagca
atgaatcagcaaacaacattggatactcctcagctagaacgcaaaaggacacgagaactt
ttggaactgggtattgataatgaagattcagaacatgaaaacgatgatgacaccaatcaa
agtgctactttgaatgataaggatgatgactctgttcctgcagaaactggccagaaccat
ccatttttccgacgttcagactctatgacgttccttgggtgtatacctccaaatccattt
gaagtgcctttggctgaagccatcccgttggctgatcaaccacacctgctacagccaaat
gctagaaaggaggacctttttggccgtccaagtcagggtctttattcctcatctgccagt
agtgggaagtgcttaatggaggttacaatggacagaaattgccttgaggttcttccaact
aaaatgtcttatgctgccaatctgaaaaatgtaatgaacatgcaaaatcggcaaaaaaag
gaaggagaagaacagaacatgcaggcagaagaagctgagaattcaaaaccaggcccatcg
gctcatgatcttgctgcacaactgaaaagtagtttactggcagaaataggtcttactgaa
agtgaaggaccacctctcacatctttcagaccgcagtgtagcttcatgggaatggttatt
tcccatgatatgttgctaggacgttggcgtctttctttggaattgtttggtagagtattc
atggaagatgttggagcagaaccaggatcaatcctaactgaattgggtggttttgaagta
aaagaatcaaaattccgtagagaaatggaaaaactgagaaaccagcagtcaagagactta
tcactagaggttgatcgagatcgagatcttctcattcagcagactatgaggcagcttaat
aatcactttggtcgaagatgtgccactacaccaatggctgtccacagagtaaaagtcaca
tttaaggatgaaccaggagagggcagtggtgtagcacgaagtttttatacagccattgca
caagcatttttgtcgaatgaaaaattgccaaatctagattgtattcaaaatgccaacaaa
ggtacccacacaagtttaatgcagagattaaggaacagaggagagagagatcgggaacgg
gaaagagaaagggaaatgaggaggagtagtggcttgcgagcaggttctcgaagagaccgg
gatagagactttagaagacagctttctattgacacccggcccttccgacctgcctctgaa
gggaatcctagcgatgatcccgatcctctacccgcacatcggcaggcacttggagagagg
ctttatccccgtgtgcaagcaatgcagcctgcatttgcaagtaaaatcactggcatgttg
ttggaattatccccagctcagctgctgctccttctagcaagtgaagattctctgagagca
agagtagatgaggccatggaactcatcattgcgcatggacgggaaaatggtgctgatagt
atcttggatcttggattattagactcctcagaaaaggtacaggaaaaccgaaagcgtcat
ggctctagtcgaagtgtagtagatatggatttagatgatacagatgatggtgatgacaat
gcccctttgttttaccaacctggaaaaagaggattttatactccaaggcctggcaaaaac
acagaagcaaggttgaactgttttagaaacattggcaggattcttggactatgtctgctg
caaaatgaactttgtcctattacattaaatagacatgtaattaaagtattgcttggaaga
aaagtcaactggcatgattttgctttttttgaccctgtgatgtatgagagtttgcgacag
ctaatccttgcttctcagagctcagatgctgatgctgttttctcagccatggatttggca
tttgcaattgacctgtgtaaagaagagggtggaggacaggttgaactcattcctaatggt
gtgaatatcccagttactcctcagaatgtgtatgaatatgtgaggaaatatgccgagcac
aggatgttggtagtagcagaacagccattgcatgcaatgaggaaaggtctactagatgtg
cttccgaaaaattcattagaagatttaacagcagaagattttaggcttctggtaaatggc
tgtggtgaagttaatgtacaaatgctgatcagctttacatctttcaatgatgaatcagga
gaaaatgctgagaagctcttacagttcaagcgttggttctggtctatagtagagaagatg
agcatgacagaacgacaagatcttgtttacttttggacatcaagcccttcattaccagcc
agtgaagaaggatttcaacctatgccctcaatcacaataagaccaccagatgaccaacat
cttcccactgcaaatacttgtatttctcgcctttatgtcccactctactcctctaaacag
attctcaaacagaaattgctacttgccattaaaaccaagaattttggttttgtgtag
DBGET
integrated database retrieval system
