Dipodomys spectabilis (banner-tailed kangaroo rat): 122102442
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Entry
122102442 CDS
T07891
Symbol
Sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04820
Cytoskeleton in muscle cells
dsp05410
Hypertrophic cardiomyopathy
dsp05412
Arrhythmogenic right ventricular cardiomyopathy
dsp05414
Dilated cardiomyopathy
dsp05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122102442 (Sntb1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
122102442 (Sntb1)
05412 Arrhythmogenic right ventricular cardiomyopathy
122102442 (Sntb1)
05414 Dilated cardiomyopathy
122102442 (Sntb1)
05416 Viral myocarditis
122102442 (Sntb1)
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Paralog
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
122102442
NCBI-ProteinID:
XP_042529097
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MAVAAAAAAAAGPAGGGGGGGGRAQRSGLLEVLVRDRWHKVLVNLSEDALVLSCEEGAAA
YNGIGTAATIGSFFCRGAGGAGHPTPAAGNLPAPDSPSGTVRTAFTDLPEQVPESISNQK
RGVKVLKQELGGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRD
ATHDEAVQALKRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGGSSDPL
SSQPFSFHRDRKNIPLKMCYVTRSMTLADPENRQLEIHSPDAKHTVILRSKDSATAQAWF
SAIHSNVSDLQTRVMAEVREQLGKTGIAGSREIRHFGWLAEKVPGESEKQWKPALVVLTE
KDLLIYDSMPRRKETWFSPVHSYPLLATRLVHSGPGKGSPQAGMDLSFATRTGTKQGIET
HLFRAEISRDLSHWTRSIVQGCHNSAELITEVTTACTYRNQECRLTIHYENGFSISTEPQ
EGAFPKTIIQSPYEKLKMSSDDGIRMLYLDFGGKEGEIQLDLHSCPKPIVFIIHSFLSAK
ITRLGLVA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcggcggcggcggcggcggggccggcgggcggcggcggcggcggc
ggcggccgggcgcagcggagcgggctgctggaagttctggtgcgggatcgttggcataaa
gttctggtgaacttgagcgaggacgccctggtgctgagctgcgaagagggcgctgcggcg
tacaacgggatcggcaccgccgccaccattggatcgttcttctgcagaggcgccggcgga
gccgggcacccgacccccgccgcggggaatctcccagccccggattcgccctccgggacg
gtgcgcaccgccttcaccgatctgcccgagcaggtgcccgaatccatctccaaccagaag
cgcggcgtgaaggtgctcaagcaggagctgggcgggctggggatcagcatcaaggggggc
aaagagaacaagatgcccatcctcatcagcaagatcttcaaggggctggcggccgaccag
acccaagccctgtacgtgggcgatgccatcctgtccgtgaacggagccgacctgcgcgac
gccacccacgacgaggcggtgcaggcgctgaagcgcgcgggcaaggaggtgctgctggaa
gtgaagtacatgagagaagccacaccctatgtgaagaaaggatccccagtatcagagatt
gggtgggaaacacctccaccggaatcccctcggctaggcggtggctcatcagaccctctg
tcatcccaaccattctccttccatagagaccggaaaaacatccccctgaaaatgtgctat
gtcactcggagcatgaccttggctgaccctgagaacaggcagcttgaaatccattctcca
gatgctaagcatacggtgatcctaagaagcaaggactcagccactgcccaggcctggttc
agtgccatccattccaacgttagtgacctgcagactcgagtgatggcagaagtcagagag
cagctggggaaaacgggcattgctggcagccgagagatcaggcacttcggctggcttgca
gaaaaggtgccaggcgaaagtgagaaacaatggaaaccagccctggttgttctgactgag
aaagacctcttaatctatgacagcatgccgaggagaaaagaaacctggttcagtccagtt
cactcataccctcttcttgccaccaggctggtccactcaggtccagggaagggatcacct
caggctggtatggatctgtcatttgcaacacgaactggtaccaagcaaggaattgaaacg
catctcttcagggcagagatcagcagagacctctcccattggaccaggagcatagtacag
gggtgtcacaactcagcggagctcatcactgaagttaccaccgcttgcacctacagaaac
caggagtgccgtttgaccatacactatgagaatggattttctatttctactgaaccacag
gagggtgcctttcctaagacaatcatccaatccccttacgagaagctcaaaatgtcttcc
gatgacggaatcaggatgctctacttagacttcggaggcaaagaaggagagattcaactg
gatcttcattcctgccccaagccaattgttttcatcattcattccttcctgtcggctaag
attacaagactgggcttggtggcctga
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