Dipodomys spectabilis (banner-tailed kangaroo rat): 122103184
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Entry
122103184 CDS
T07891
Symbol
Casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122103184 (Casc3)
03015 mRNA surveillance pathway
122103184 (Casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122103184 (Casc3)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122103184 (Casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
122103184
NCBI-ProteinID:
XP_042529567
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPGRGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPETKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERANKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAARNYSRSGGFKEGRTGFRPVEAGGQHGGRSSETVKHDASYRSRRLEQTPVR
DPSPEADAPVLGSPEKEEAASETPAPVPDIAPPAPDRPIEKKSYSRARRTRTKVGDAVKA
PEEVPPPPEGLTSAPAVPETTPPSAKAGNWEAPVESATGGLEQDVAQLNLAEQNWSPGQP
SFLQPRDLRGMPNHMHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHIS
IMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLYP
PPVSMSPGQPPPQQLLAPTYFSAPGVMNFSNPSYPYAPGALPPPPPPHLYPNTQAPSQVY
GGVTYYNPAQQQVQPKPSPPRRTPQPVSIKPPPPEVVSRGSS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcaacgcgcttcgcaggacaccgaggacgaagaatcgggtgct
tcgggatcggacagcggtggctctccggggcgaggcggtggcagctgcagcgggagtgct
ggaggcggcggcagcggctctctgccttcccagcggggcggccgtgccggggccctgcat
ctgcggcgggtggagagcgggggggccaagagcgcggaggagtcggagtgtgagagtgaa
gatggcatggaaggcgatgctgttctctcagattatgaaagtgcagaagactcagaaggt
gaagaaggggagtacagtgaagaagaaaactccaaagtggagctgaaatcggaagctaat
gatgctgctaattcttcagcaaaagaagagaagggagaagaaaagccagaaaccaaaggc
actgttactggagagaggcaaagtggagatggacaggagagcacagagcctgtggagaac
aaagtgggtaagaagggacctaagcatttggatgatgatgaagatcggaaaaatccagca
tacataccacggaaagggctcttctttgagcatgatctccgagggcaaactcaggaggaa
gaagtcagacctaagggacgtcagcgaaagctatggaaggatgagggtcgctgggaacat
gacaagttccgtgaagatgagcaggccccaaagtcccgacaggagcttattgctctttat
gggtatgacattcgctcagctcataatcctgatgacatcaaaccccgaagaatccggaaa
cctcgatttggcagtcctccacaaagagatccaaactggattggtgagcgggcaaacaag
tcccatcgccaccagggtcctgggggcaccctaccaccaagaacatttattaacaggaat
gcagcaggtactggccgcatgtctgcagccaggaattattcccgatctgggggcttcaag
gaaggtcgtactggttttagacccgtggaagctggtgggcagcatggtggtcgttctagt
gagactgttaaacatgatgctagttaccggtcacggcgcctggagcagactcctgtgaga
gatccatctccagaagcagatgctccagtgcttggcagtcctgaaaaggaagaagcagct
tcagagacaccagctcctgttcctgacattgcaccaccagcccctgacagacccattgag
aagaaatcatattctcgggccagaagaactcgaaccaaagttggggatgcagtgaaagct
cctgaagaggtcccccctccacccgaagggctgacctcagcacctgctgtccctgaaact
acccctccatctgctaaggctggtaactgggaggctccagtagagtctgctacaggtgga
ctggaacaagatgtggcacagctaaatctagcagaacagaattggagtccaggacagcct
tcattcctgcagccacgggacctccgaggtatgcccaaccacatgcatatgggagcagga
cctccacctcagttcaaccgaatggaagaaatgggtgtccagggtggtcgagccaaacgc
tattcatcccagagacagagacctgttccagagccccctgctcctcctgtgcatataagt
atcatggaaggacactactatgacccactgcagttccagggaccaatctatacccatggt
gacagccctgccccactgcctccgcagggcatgatcgtgcagccagaaatgcaccttccc
cacccaggtttacatcctcaccagacaccggcaccactgcccaatccgggcctctatccc
ccaccggtgtccatgtctccaggacagccaccaccccagcagttgcttgctcctacttac
ttttctgctccaggggtcatgaacttcagtaatcccagctacccttatgctcctggagca
ctgcctccgccaccacctcctcatctataccctaatacgcaggccccatcacaggtctat
ggaggagtgacctactataaccctgcccaacagcaggtgcagccaaagccctctccacct
cgaaggactccccagccagtgtccatcaagccccctccacctgaggttgtaagcaggggt
tccagttaa
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