Dipodomys spectabilis (banner-tailed kangaroo rat): 122103531
Help
Entry
122103531 CDS
T07891
Symbol
Rai1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsp03000
]
122103531 (Rai1)
Transcription factors [BR:
dsp03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122103531 (Rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
122103531
NCBI-ProteinID:
XP_042530073
LinkDB
All DBs
Position
Unknown
AA seq
1910 aa
AA seq
DB search
MQSFRERCGFHGKQQNYPQTSQETSRLENYRQPSQAGLSCDRQRLLAKDYYSPQPYAGYE
GGTSTPSGAATTVADKYHRGSKALQGRPAFPGYSSVQDSSPYPGRYSSEEGLQAWGAPQP
PPPQPQPLPGGVGKYEENLMKKTAVPPGRQYSEQGTQLPFRTHSLHVPQPPPQLPQPQQP
LAYPKLQRQKLQNDLASPLPFPQGSHFPQHSQSFPTSSTFSSSVQGGSQGTHSYKSCTAP
SSQPHDRPLTANASLAPGQRVQNLHTYQSGRLGYEQQQQQQQQQALQSRHHAQETLHYQN
LAKYQHYGQQGQGYCQPDAAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNL
ENFPYNQQPLSTGAFPTGITDHSHFMPLLNPSPTDAAGSVDTQASNCKPLQKDKIPENLL
SDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGVKNLVSRTPEQHKSQHCSPEGSG
YSAEPAGTPLSEPPSSTPQSTHAEPQEADYLSGSEDPLERSFLYCSQARGSPARVNSNSK
AKPESVSTCSVTSPDDMSTKSDDSFQSLHSTLPLDSFSKFVAGERDCPRLLLSALAQEDL
ASEILGLQEAIGEKADKAWAEAPGLPKDASKPPFSLENHSACLDSVAKTAWPRPGEPEAL
PDSLQLDKGGSTKDFSAGLFEDPSVAFATPDPKKTTSALSFGTKSTLGAAAPDPTTAAFD
CFPDTTTASSVDSANPFAWPEENLGDACPRWGLHPGELTKGLEQGGKTSEGLGKGEAHEA
SACLGFQEEEPSGDKAALLPGDFKQEEAGGVKEEAGGLLQCPDVGKADRWLEDSRHCCSA
ADFGDLPLLPAPGRKEDLEAEEEYSSLCELLGSPEQRPGLQDPLSPKAPLICTKEEAEEV
LDSKAAWDSPCHLSGESVILLGPTVGAESKVQSWFESSLSHMKPGEDRPDAERAPGDSAS
SDPSLAPKLSKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPALPKDLLLP
ESCTGPPQGQMEGAGAPGRGASEGLPRMCTRSLTALSEPRTPGPPGLTTTPAPPDKLGGK
QRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPGTPGKDQRSMILR
SRTKPQEIFHAKRRRPSESRLPNCRATKKLLANNHLPTTFKVSSSPQKEGRVSQRARVPK
PGTGGKLSDRPLHALKRKSAFLTPVPTKKRNLVLRSSSSSSNTSGSGGDGKEERAEGSPN
LFRRVSSPKKAKPKGSGEPPTKPPPLETPDTCIKLASRAAFQGTMKTKVLPPRKGRGLKL
EAIVQKITSPSLKKFVCKVPGAPLGTPLSPALPDKDRGGLKSAGGSPAGAEEGLVSMGTG
QKLPAASGADPLCRNLANRALKGKLVNSKKLSSPDCFKSEAYPPAEALQPGGTALAPKKR
SRKGRAGAPGLSKIPLEKRPYLGPALLLTPRDRVSSMQGDVEDNSGGGGGGGKKPKTEEL
GLASQPPEGRPCQPQTRAQKQPSHTNYSSYSKRKRLTRGRAKNTNASPCKGRAKRRRQQQ
VLPLDPAEPEIRLKYISSCKRLRADSRTPAFSPFVRVEKRDAFTTVCTVVNSPGGEPKPH
RKPSSSTSSSSSFSLDSAGASLTTLPGGSILQPRPSLPLSSTMHLGPVVSKALSTSCLVC
CLCQNPANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGMFEEASLPLERTVKGLECVA
TAATTAAATTTTTTGKPPRPDGPADPAKQGSLRTSARGLSRRLQSCYCCDGRGDGGEEVA
PADKNRKHECSKGVPTEPGGDTQEHWVHEACAVWTSGVYLVAGKLFGLQEAMKVALDMTC
SSCQEAGATIGCSYKGCVHTYHYPCASDAGCIFIEENFSLKCPKHKRLPL
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagaactacccgcagacc
tcacaggaaacatcgcgcctggagaattacaggcagcccagtcaggctgggctaagctgt
gaccggcaacggctgctggccaaggactattacagcccacagccttatgcaggttatgag
ggtggtaccagcacaccctctggtgcagcaaccacagtggctgacaagtaccaccgaggc
agcaaggccctgcaggggaggccagctttccctggctatagcagcgtccaggacagcagc
ccctacccgggacgctattctagtgaggaaggtctgcaggcctggggggctccacagcca
cctccccctcaaccacaacccctgccaggaggggtgggaaagtatgaagagaacttgatg
aagaagacagcggtgcccccaggcaggcagtactccgagcagggcacccaacttcccttc
cggactcactctttgcatgtcccccagcctccgcctcagctgccacagccccagcaaccc
ttggcataccccaaactccaaaggcagaaactgcagaatgacctcgcctctcccctgcct
tttccccagggcagccactttccccagcactcccagtccttccccacctcctctaccttc
tcctcgtctgtccagggtggcagccaggggacccactcttacaagagttgcacagcaccg
tcttcccagccccatgacaggccactgactgccaatgccagcctggccccggggcagcgg
gtccagaaccttcacacctaccagtcaggccgccttggttatgagcaacagcagcagcag
cagcagcagcaagcacttcagagccggcaccatgcccaggaaaccctccattaccaaaac
ctcgccaaataccaacactacggacagcaaggccagggctactgccagccggatgcggcc
gtcaggactccagagcagtattaccagaccttcagccccagctccagccactcccctgca
cgctccgtgggccgctcaccttcctacagctccaccccatcgccgctgatgcccaacttg
gagaactttccatacaaccagcagccactcagcaccggagccttccccacgggtatcacc
gaccacagccacttcatgcccctgctcaacccctccccgaccgatgctgctggctctgtg
gacacccaggccagcaactgcaagcccctgcaaaaggacaagatccctgagaacctgctg
tcagatctcagcctgcagagcctcacggccctgacctcacaggtggagaacatctccaac
actgtgcagcagctcctgctgtccaaggctgccgtgccgcagaagaaaggggtgaagaac
cttgtgtccaggactccagaacagcacaagagccagcactgtagccctgagggcagtggc
tactcggcagagccagcaggcacaccactgtccgagccaccgagcagcacaccacagtcc
acccatgccgagccccaggaggcagactacctaagcggctctgaggaccctctggagcgc
agctttctctactgcagccaggcccgtggcagccctgccagggtcaacagcaactccaag
gccaagcctgagtctgtgtctacctgttctgtgacctcacctgatgacatgtccaccaaa
tctgatgactccttccagagcctgcacagcactctgccgctggacagcttttccaagttc
gtagcaggcgagcgggactgcccacggctgctgctcagcgcactggcacaggaagacctg
gcctcagagatcctggggctgcaggaggccatcggggagaaggctgacaaggcctgggcc
gaggctcctggactgcccaaagatgccagcaagccgcccttctcactggagaaccacagc
gcctgcctggactccgtagccaagactgcatggccacggccaggggagccagaggccctg
cctgactccttacagctggacaagggtggcagcaccaaggatttcagcgcagggctgttt
gaagacccttctgtggcctttgccacccctgaccccaaaaagacaaccagtgccctgtcc
tttggcaccaagtccactcttggggctgctgctccagaccccaccacggcagcatttgac
tgcttcccagacacaaccaccgccagttcagtggacagtgccaacccctttgcctggcca
gaggagaacctgggggatgcttgtccccggtggggattacaccctggtgaactcaccaaa
ggcctggagcagggtgggaagacctcagaaggactgggcaaaggggaggcccatgaggct
tcggcctgcctgggcttccaggaggaggagccctcgggggacaaggcagccctgctgcct
ggggatttcaagcaggaggaggcgggcggggtgaaggaggaggcgggcgggctgctgcag
tgtcccgatgtgggcaaggctgaccggtggctggaggacagccgacactgctgttctgct
gctgactttggggacctgccactgctgccagcccctggcagaaaggaggacctggaggct
gaggaggagtactcgtccctgtgtgagctactgggcagcccagagcagaggccgggcctg
caggacccactctcacccaaggccccgctcatctgcaccaaggaggaggctgaggaagtg
ctggactccaaggctgcctgggattccccgtgccacctctctggggagtccgtcatcttg
ctgggccccacagtgggtgctgagtccaaggtccagagctggtttgagtcctccctgtcc
cacatgaagccaggtgaggataggcctgacgcagagcgggctccaggggactctgcctcc
tcggacccctccctggcccccaaactgagcaagcccgctgtgcccgaggcaccgattgct
aagaaagagcctgtgccacggggcaaaagtttacgaagccggcgggtacaccgggggctg
cctgaggccgaggactccccatgcagggcccctgcgctgcccaaagacctcttgctccct
gagtcctgcacggggcccccacaaggacaaatggaaggggctggggctccaggccggggg
gcctcagaaggccttcccagaatgtgtacccgctccctcactgccttgagtgagccccgc
acacctggaccgccaggcctgaccaccacccccgcgcccccggacaaactggggggcaag
cagcgagctgccttcaagtctggaaagcgggtggggaagccctcgcccaaggctgcatct
agccccagcaacccggctgccctgcctgtggcctcagacagcagccccatgggttccaag
accaaggagacggactcccccggcacacctggcaaggaccagcgctccatgatcctccgg
tcccgtaccaaaccccaggagatcttccacgccaagcggaggcggccctctgagagccgg
ctccccaactgccgtgccaccaagaaactccttgctaacaaccacctgcccaccacgttc
aaggtctccagcagcccccagaaggaaggccgggtgagccagcgggcaagagtccctaag
cccggcacagggggcaagctttcagatcggcccctccacgcactcaaaaggaagtcagcc
ttcctgacgcctgtccccaccaagaagcggaacctcgtgctacggagcagcagcagcagc
agcaataccagtggcagcggtggggacgggaaggaggagagggctgagggttcccccaac
ctcttcaggagggtgtcctcccccaagaaggccaagcccaagggaagtggtgagcctccc
accaagccaccacccctggagacccctgacacctgcatcaagctcgcctcccgggcagcc
ttccagggtaccatgaagactaaggtgctgccaccccggaagggccggggcctgaagctg
gaggccatcgtgcagaagatcacctcgcccagcctcaagaagttcgtgtgcaaagtgcca
ggggcccctcttgggactcctctgagcccagccctcccggacaaagaccgtggtgggctc
aagagtgctgggggcagcccagctggggcagaagagggtctggtaagcatgggtactggg
cagaaactcccggcggcttcgggagcagacccattgtgcagaaacctggccaacagggcc
ttaaaaggcaagctcgtgaacagtaagaaactgtcctcacctgactgtttcaaaagtgag
gcctacccacctgcagaggccctgcaacccggggggactgccctagcaccgaagaagagg
agccggaaaggcagggcaggagcaccaggactttccaaaatcccactggagaagcggccc
tatcttggcccagctctgctcctcactccccgagacagggtcagcagcatgcagggggat
gtcgaggacaactctggtggtggaggaggaggaggcaagaagccaaagacagaggagctg
ggcctggcctcccagcctccagaaggccgaccctgccagccccagacaagggcacagaag
cagccaagccacaccaactacagcagctactccaagcggaagcgtctgacccgaggccga
gccaagaacaccaatgcttccccctgtaaggggcgtgccaagcggagacggcagcagcag
gtactgcccctggatcctgcagagcctgaaatccgcctcaagtacatttcctcttgcaag
cggctgagggcagacagccggaccccagccttctcacccttcgtgcgggtggagaagaga
gacgcattcaccaccgtgtgcactgttgtcaactcccccgggggcgagcccaagccccat
aggaagccttcctcttccacctcctcctcttcctcgttctccttagactcagctggggcc
tctctgaccacactccctggaggctccatcctgcagcctcggccctccctgcccctctcc
tctaccatgcacctggggcctgtagtgtccaaggccctgagtacctcttgccttgtttgc
tgcctctgccaaaacccagccaacttcaaggaccttggggacctctgtgggccctattac
cctgaacactgcctccccaaaaagaagccaaaactcaaggagaaggtgcggccagaaggc
atgttcgaggaggcctcactcccccttgagagaacagtcaaaggcctcgagtgtgtggcc
accgcggccaccaccgccgctgccaccaccaccaccaccactgggaaaccccccaggcct
gacggcccagctgacccggccaagcagggctcgctgcgcaccagcgcccggggcctgtcc
cggcgcctgcaaagttgttactgctgtgatggtcggggggacgggggcgaggaggtagcc
ccagccgacaagaaccgcaagcatgaatgcagcaaaggggtccccacagagcctggtggg
gatacccaggagcactgggtgcatgaggcctgtgctgtgtggaccagcggggtctacctg
gtggccgggaagctctttgggctgcaggaggccatgaaggtggccctggacatgacatgt
tccagctgccaagaagccggggccaccatcgggtgctcctacaaaggatgcgtccacacc
taccactatccgtgtgccagcgacgcgggttgcatattcatcgaagagaacttttctttg
aagtgtcccaagcataagaggctgccattgtaa
DBGET
integrated database retrieval system
