KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122103549
Entry
122103549         CDS       T07891                                 
Symbol
Pafah1b1
Name
(RefSeq) platelet-activating factor acetylhydrolase IB subunit beta
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp00565  Ether lipid metabolism
dsp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    122103549 (Pafah1b1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dsp03036]
    122103549 (Pafah1b1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dsp04147]
    122103549 (Pafah1b1)
Chromosome and associated proteins [BR:dsp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122103549 (Pafah1b1)
Exosome [BR:dsp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122103549 (Pafah1b1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_EML NBCH_WD40 Beta-prop_SCAP Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SPT8 LisH Beta-prop_DCAF12 LisH_PAC1 Beta-prop_RIG_2nd Beta-prop_IFT140_1st eIF2A Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Nucleoporin_N Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH LisH_2 SutA-RBD
Other DBs
NCBI-GeneID: 122103549
NCBI-ProteinID: XP_042530094
LinkDB
Position
Unknown
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcccagagacaacgagatgaactaaatcgagctatagcagattatcttcgt
tcaaatggctatgaagaggcatattcggtttttaaaaaggaagctgaattagatatgaat
gaagaattagataaaaagtatgctggccttttggaaaaaaaatggacatctgttattaga
ttacaaaagaaggttatggaattagaatcaaagctaaatgaagcaaaagaagaatttacg
tcaggtggtcctcttggtcagaaacgagatccaaaagaatggattccccgtccaccagaa
aaatatgcattgagtggtcacaggagtccagtcactcgagtcattttccatcctgtgttc
agtgtcatggtctctgcttcagaggatgctacaattaaggtgtgggattatgagactgga
gattttgaacgaactcttaagggacatacagattctgtacaggatatttcctttgaccac
agtggcaagcttctggcttcttgttctgcagatatgaccattaaactatgggattttcag
ggctttgaatgcatcagaaccatgcatggccatgaccacaatgtctcttcagtagccatc
atgcctaatggagatcatatagtgtctgcttcacgggataaaactataaaaatgtgggaa
gtgcaaactggctactgtgtgaagacatttacaggacacagagaatgggtacgtatggta
cggccaaatcaggatggcactctcatagccagctgttccaatgaccagactgttcgtgtg
tgggtcgtagcaacaaaggagtgcaaagcagagctccgagaacatgagcatgtggtggaa
tgcatttcctgggctccagaaagttcatattcttccatctctgaagcaacaggatctgag
actaaaaaaagtggcaaacctgggccattcttgctatctggatccagagacaaaactatt
aagatgtgggacgtcagtactggcatgtgccttatgactcttgtgggtcatgataactgg
gtacgtggagttctgttccattctggggggaaatttattttgagttgtgctgatgacaag
accttacgtgtatgggattacaagaataagcgatgcatgaagaccctcaatgcgcatgaa
cactttgttacctccttggatttccacaagacggccccctatgtggttactggcagtgta
gatcaaacagtaaaggtgtgggagtgccgttga

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