Dipodomys spectabilis (banner-tailed kangaroo rat): 122103771
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Entry
122103771 CDS
T07891
Symbol
Cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04115
p53 signaling pathway
dsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122103771 (Cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122103771 (Cop1)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122103771 (Cop1)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122103771 (Cop1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122103771 (Cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
zf-Nse
Motif
Other DBs
NCBI-GeneID:
122103771
NCBI-ProteinID:
XP_042530349
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MSGSRPTGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALVSGGGAQAAGSGG
LGGPGRPVLVAAAVSGSGGGGGSGGGAVSAGLSRLSCGARPGAGVGGSGSGLGGGSGRKR
PPLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKC
NYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNL
DLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDI
KRVEEMSGVYSPVSEDSTVPQCEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTL
ASRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSY
ASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKI
SCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGS
DDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIM
VFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGD
YIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGES
NVLIAANSQGTIKVLELV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtagtcgaccgaccgggtcgggctccgccgggacgagccccggctcctcggcg
gcctcctcggtgacttccgcctcctcgtccttatcctcgtccccgtcgcccccttccgtg
gcggcctcggcggcggcgctggtgtccggcggaggcgcccaggccgcgggctcgggcggc
ctcgggggtccggggcggcctgtgctggtggcggccgccgtgtcgggcagcggcggcggc
ggcggcagcggcggcggggcggtgtccgcgggcctgtcgcggctcagctgcggggccagg
cccggcgccggcgtaggaggcagcggctccggcctcggcggcggcagcggccggaagcga
cctccgctcgccccgctctgcaatgggctcatcaactcctacgaggacaaaagcaacgac
ttcgtctgccccatctgctttgatatgattgaggaagcatacatgacaaaatgtggccac
agcttttgctacaagtgtattcatcaaagtttggaggacaataatagatgtcccaagtgt
aactatgttgtggacaatattgaccatctctatcctaatttcttggtgaatgagctcatt
ctcaaacaaaagcaaagatttgaggaaaagaggttcaaattggaccactcagtgagtagc
accaatggccacaggtggcagatatttcaagatttgttaggaactgaccaagataacctt
gatttggctaatgtcaacctcatgttggagttacttgtgcaaaagaagaaacaactggaa
gcagaatcacatgcagcccaactacagatccttatggaattcctcaaggttgcgagaaga
aataagagagagcaactggaacagatccagaaggaactaagtgttttggaagaagatatt
aaaagagtggaagaaatgagtggcgtatactctcctgtcagtgaagatagcacagtgcct
caatgtgaagccccttctccatcacacagtagtataattgattctacagaatacagccaa
cctccaggtttcagtggcagttctcagacaaagaaacagccttggtataacagcacatta
gcctcaagacgaaaacggctcactgctcattttgaagacttagagcagtgttatttttct
acaaggatgtctcgtatatcagatgacagccgaactgcaagccagttggatgaatttcag
gaatgcctgtctaagtttacaagatataattcagtacgacctttggccacattgtcatat
gctagtgatctctataatggttccagcatagtttctagtattgaatttgatcgggattgt
gactattttgcaattgctggggttacaaaaaagattaaagtctatgagtacggcacagtc
atccaggatgcagtggatattcattatcctgagaatgaaatgacctgcaattccaaaatc
agctgtatcagttggagcagttatcataaaaacctgttagccagcagtgattatgaaggt
actgtcatcctatgggatggattcacaggacagagatcaaaagtgtatcaggaacatgag
aagaggtgttggagtgttgactttaatttgatggatcctaaacttttggcttcaggttct
gatgatgcaaaagtgaagctatggtctaccaacctagacaattcagtggcaagcattgaa
gcaaaggctaatgtgtgctgtgtgaaattcagtccctcctccagatatcatctggctttt
ggttgtgcagatcactgtgtccactactatgatcttcgtaacactaaacagccaatcatg
gtattcaagggacaccgaaaagcagtctcttatgcaaagtttgtgagtggcgaggaaatt
gtctctgcctcaacagacagccagctaaaactgtggaatgtagggaaaccatactgtcta
cgttccttcaagggacatatcaatgaaaaaaattttgtaggccttgcttccaatggagat
tatatagcttgtggaagtgagaacaactctctctatctgtactataaaggactttctaag
actttgctaacttttaagtttgatacagttaaaagtgttctggataaagacagaaaagaa
gatgatacaaatgaatttgttagtgctgtgtgctggagggcactaccagatggggagtcc
aatgtgctgattgctgctaacagtcagggtacaattaaggtgctagaattggtatga
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integrated database retrieval system
