Dipodomys spectabilis (banner-tailed kangaroo rat): 122104045
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Entry
122104045 CDS
T07891
Name
(RefSeq) tripartite motif-containing protein 43-like
KO
K12019
tripartite motif-containing protein 43/48/49/64/77
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122104045
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122104045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
SPRY
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-B_box
Baculo_IE-1
U-box
zf-RING_6
zf-RING_10
RUBY_RBDX
RACo_linker
Pre-PUA
DUF6079
Motif
Other DBs
NCBI-GeneID:
122104045
NCBI-ProteinID:
XP_042530647
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MEWDIAQAFQEELRCPICMETFIDPVTIHCGHSLCRPCLRLLWEEAETPARCPVCRQPSQ
QEELKTNIALQSLVSISRQISLRQFLSSEEHTCCTHKETKQMFCEVDKSLLCPHCSPSRE
HEAHRHQPVDCIAADKRKIILKEMDTIWEKIQKNQSNIYEKRNIINQWVWYMNLHREMTK
DFYSALHLGLREEEIRLSEILKEKGRVIFLQLRTMETQMLQKSSDLRNIYQELMKTYQKL
DLELLRHLEDTLERCESALLFMPQLKKPELSPPPIPRLMDNLNHYRVEITYCHLIQNHEE
SNYVALSGIQEFSSGKHYWELSVQGFSTWAVGVFRNSAIGSNLILNESEDIFLLFSGKGN
IHYSIFTTAPLLPYFIERPVGRIGVFLDLENGNVSFVNATKNSFIWRYPTNSFQYPVKPC
FFSW
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggacattgcccaagccttccaggaagagttgagatgccccatctgcatggaa
acctttatcgacccagtcaccatccactgtgggcacagtttgtgtcgaccgtgtctgcgc
ctcctctgggaagaagctgagactccagccaggtgccctgtgtgcaggcaaccctctcag
caagaagagctcaaaaccaacattgccctacagagtctggtgtccatcagccgacaaatc
agcctccgacaattcctgagctccgaggagcatacatgctgcacacacaaggagaccaag
cagatgttttgtgaagtggacaagagcctgctgtgtcctcactgctccccatctcgggaa
catgaggctcacagacaccaacctgtcgactgtattgctgcagacaaacgaaagattatt
ttaaaggaaatggacactatatgggagaagatacaaaaaaaccagagcaatatatacgag
aagaggaacatcatcaaccagtgggtttggtacatgaatctacacagggagatgaccaaa
gatttttattcagcactgcatctgggtctccgggaggaggaaatacgactttcggagata
ctcaaagagaaaggaagagtcatctttctgcaactcaggacaatggaaacccaaatgctt
cagaaaagcagtgacctcagaaacatatatcaggagctgatgaaaacctaccaaaagcta
gacctggaactcctgcggcatttagaagacaccctggaaagatgcgagagtgccttgctc
ttcatgccccagctgaagaagccagagctcagccctcctcccattcctagattgatggat
aacctcaaccattatcgagtggagatcacctattgtcatttgattcagaatcatgaagaa
tccaactatgttgctctttcaggaatccaagagttcagctctgggaaacattactgggag
ctcagtgtccaaggcttctccacctgggctgtgggcgtcttcagaaattcagcaataggg
agcaaccttattctgaatgaatctgaggacatttttcttcttttctctggcaaggggaac
attcattatagtatctttaccaccgctccattgcttccttactttatagagagaccagtg
ggccgcattggtgtgtttcttgatctcgaaaatggaaatgtgagttttgtgaatgctact
aagaattcctttatctggagatacccaactaactccttccagtatcctgtcaagccttgt
tttttctcctggtaa
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