Dipodomys spectabilis (banner-tailed kangaroo rat): 122104076
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Entry
122104076 CDS
T07891
Symbol
Slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04360
Axon guidance
dsp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122104076 (Slit2)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122104076 (Slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dsp00536
]
122104076 (Slit2)
Glycosaminoglycan binding proteins [BR:
dsp00536
]
Heparan sulfate / Heparin
Axon guidance molecules
122104076 (Slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
EGF_TEN
hEGF
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_TGFA-like
Motif
Other DBs
NCBI-GeneID:
122104076
NCBI-ProteinID:
XP_042530687
LinkDB
All DBs
Position
Unknown
AA seq
1529 aa
AA seq
DB search
MPGVGWQMLSLTLGLVLAIVNPAAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFTGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE
TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI
TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSALR
AIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSA
KEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRL
NNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGTFEGASGVNEILFTSNRLESVRHK
MFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLN
LLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNS
CSPLSRCPVECTCLDTVVRCSNKGLKILPKGIPRDVTELYLDGNQFTLVPKELSNYKHLT
LIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPSRTFDGLKSLRLLSLHGNDISVV
PEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTT
PSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHA
CISNPCKHGGTCHLKEGEKEGFWCICADGFEGENCEINVDDCEDNDCENNSTCVDGINNY
TCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPKGYKCDCTPGYIGEHCDIDFDDC
QDNKCTNGAHCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRI
NEPICQCLPGYQGEKCEKLVSVNFVNKESYLQIPSAKVQPQTNITFQIATDEDSGILLYK
GDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGS
PKIITNLSKQSTLNLDSPLYVGGMPGKNNVASLRQAPGQNGTSFHGCIRNLYINSELQDF
QKVPMQTGILPGCEPCHKKVCAHGTCQPGSPTGFTCECEEGWMGPLCDQRTNDPCLGNKC
MHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQTIKCKHGKCRLSGLGQPYCECSS
GYTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECKGGCVGGQCCGPLRSKRR
KYSFECTDGSSFVDEVEKVVKCGCMRCIS
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgtcggctggcagatgctgtccctgacgctggggttagtgctggcgatcgtg
aacccggcggccccgcaggcgtgtccggcgcagtgctcctgctcgggcagcaccgtggac
tgtcacggattggcactgcgcagtgtgcccaggaacatcccccgcaacaccgagcgactg
gatctgaatggaaataacatcactcggattacgaagacagattttactgggctcaggcac
ctcagagttcttcagcttatggagaacaagattagcaccattgaaaggggagcattccaa
gatcttaaggaactggagagactgcgtttaaacagaaatcaccttcagctgtttcctgag
ttgttgtttcttgggacatcgaagctatataggcttgatctcagtgagaatcaaattcag
gccattccaaggaaggctttccgaggggcagttgacattaaaaatttgcaactggattac
aaccagatcagctgtattgaagatggggcttttcgggctctccgggacctggaagtgctc
actctcaacaataacaatattacaaggctttctgtggcaagtttcaaccatatgccaaaa
cttcgaacttttcgactccattccaacaacctgtattgtgactgccacctggcctggctc
tccgactggcttcgccaaaggcctcgagtaggcctgtacacgcagtgtatgggcccttcc
cacctgaggggtcataatgtcgccgaggttcaaaaacgagaatttgtctgcagtggtcac
cagtcattcatggctccttcttgtagtgttttgcactgccctgctgcttgtacctgcagc
aataatattgtggactgccgtgggaagggtcttactgagatccccacgaatctgccggag
accatcacagaaatacgcttggaacagaactcaatcaaggtcattcctcccggagctttc
tcaccatataaaaagctccgaagaattgacctgagcaataatcagatctctgaacttgca
ccagatgctttccaaggactccgctctctaaattcacttgtcctctatggaaataaaatc
acagaactccccaagagtttatttgaaggactattttccttacagctgctattactgaat
gccaacaagataaactgcctccgcgtagatgcttttcaggatctgcacaacctgaacctg
ctctccctgtatgacaacaagctgcagaccattgccaaaggcaccttttcagctctccgg
gctatccaaacgatgcatctggcgcagaacccctttatttgtgactgccatctgaagtgg
ctggcggattatctgcataccaaccccattgagaccagcggtgcccgctgcaccagcccc
cgccgcttggcaaacaaaagaatcggacagatcaaaagcaagaaattccgttgttcagct
aaagaacagtatttcattccaggtacagaagattaccgatcaaaattaagtggagactgc
ttcgcagatttggcttgtcccgaaaagtgccgatgtgaagggaccacagtagattgctcc
aaccagaaactcaacaaaatcccagaccacattccccagtacactgcagagctgcgactc
aataacaatgaattcacagtgttggaagccacaggaatctttaagaaacttcctcaatta
cgtaaaatcaattttagcaacaataaaatcacagatattgaggagggaacatttgaagga
gcatctggggtaaatgaaatacttttcactagtaaccgtttggaaagtgttcggcataag
atgttcaaaggattggaaagcctcaaaactttgatgttgagaagtaatcgcataagctgt
gttgggaatgacagctttataggactcagttctgtacgtttgctttctttgtatgataat
caaattactacaattgcaccaggggcgtttgacacactccattccttatctactctaaac
ctcttggccaatccttttaactgtaactgctacctggcttggttgggagagtggctcagg
aagaaaaggattgtaaccggaaatcctcgctgtcaaaagccatacttcctcaaagaaatc
ccaatccaggatgtggccattcaggatttcacttgtgatgatggaaacgatgacaatagt
tgctctccactgtctcgctgtcctgtggaatgtacctgcttggatactgttgtccgatgt
agcaacaagggcttaaagatcttgccaaaaggaattccaagagatgtcacagagttgtat
ctggatggtaaccaatttacactggtcccgaaggaactctctaactacaagcacttaaca
cttatagatttaagcaacaaccgaataagcactctttcgaatcaaagcttcagcaacatg
acccagcttctcaccttaattcttagttacaaccggctgagatgtattccttcccgaaca
tttgatggattaaagtctcttcgattactatctttacatggaaatgatatttctgtcgtc
cctgaaggtgctttcaatgatctttctgcattatcacacctagcaattggagccaaccct
ctttactgtgattgtaacatgcagtggttatccgactgggtaaagtcggaatataaggaa
cctggaattgctcgctgtgctggtcctggagaaatggcagataaattgttacttacaact
ccctccaagaaatttacctgtcaaggtcctgtggatgtcaatattctggctaaatgtaac
ccctgtctgtcaaatccctgcaaaaatgacggcacctgtaacaacgatccagttgacttc
taccggtgtacctgtccatatggtttcaaggggcaagactgtgatgtcccaattcatgcc
tgcatcagtaacccatgtaagcatggagggacttgccatctgaaagaaggagaaaaggag
ggattctggtgtatttgtgctgatggatttgaaggagaaaactgtgaaatcaatgttgat
gattgtgaagataatgattgtgaaaataattccacctgtgttgatggaattaataactac
acatgcctttgtccacctgagtacacaggcgagctgtgtgaggagaagctggacttctgt
gctcaggacctgaacccctgccagcatgactccaagtgcattctgaccccaaaaggatac
aagtgtgactgcacaccaggatacatcggggagcactgtgacatcgattttgatgactgc
caagataacaagtgtacaaatggggcccactgcaccgacgcggtgaacggctacacgtgc
atctgtcccgaaggctacagtggcttgttctgtgaattttctccacctatggttctgcct
cggaccagcccctgtgataattttgattgtcagaatggagctcagtgcatcatcaggata
aatgagcccatatgccagtgtttacctggctaccagggagagaagtgtgaaaaattggtc
agtgtgaattttgtaaacaaagagtcctaccttcaaattccttcagccaaggtgcagcca
cagacaaacatcacctttcagattgccaccgatgaagacagtggcatcctcctgtataag
ggtgacaaagaccacatcgctgtggaactctaccgcgggcgcgtgagggccagctatgac
accggctcccacccggcttctgccatttacagtgtggagacaatcaatgatggaaacttc
catattgtggagctgcttgccctggatcagagtctctccctctccgtggatggagggagc
cccaaaatcatcaccaacttgtcgaaacagtccactctgaatctcgactctccactctac
gtaggaggcatgcctgggaagaacaatgtagcatctctacgccaggcccccgggcagaac
ggcaccagcttccatggctgcatcaggaatctttacatcaacagtgagctgcaggacttt
cagaaggttcccatgcagacaggcattctgcccggctgtgagccatgtcacaagaaagtg
tgtgcccatggcacctgccagcctggcagcccgacgggcttcacatgcgagtgtgaggag
ggctggatggggccgctctgcgaccagcggaccaatgacccctgccttggaaacaaatgc
atgcatgggacgtgcttgcccatcaacgcattctcctacagctgcaaatgcctggagggc
catgggggcgtcctctgtgatgaagaagaagatctcttcaacccctgccagaccatcaag
tgtaaacacggcaagtgcaggctctcggggctcggacagccctactgtgaatgcagcagt
ggatacactggggacagttgtgaccgagaaatctcttgtcgaggggagcggatcagagat
tattaccaaaagcaacagggctacgccgcctgtcaaacaacgaagaaggtctctcgtttg
gaatgtaaaggcgggtgtgttggcgggcaatgctgtggacctcttaggagcaagagacgg
aaatactcctttgaatgcacggacggctcttcctttgtggatgaagttgagaaggtggtg
aagtgtgggtgtatgaggtgcatatcctaa
DBGET
integrated database retrieval system
