Dipodomys spectabilis (banner-tailed kangaroo rat): 122104239
Help
Entry
122104239 CDS
T07891
Symbol
Ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03082
ATP-dependent chromatin remodeling
dsp05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122104239 (Ss18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
122104239 (Ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122104239 (Ss18)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122104239 (Ss18)
GBAF(ncBAF) complex
122104239 (Ss18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
122104239
NCBI-ProteinID:
XP_042530909
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPTYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcagccccgaggcagcgaggcaagggagagatcacacccgcggcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaaggcctcagagtgttctcagtaccagcagatgttgcatacaaacttggtatat
cttgctacaatagctgattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggaggaatgaatcagagtggccctcccccacctccacgc
tctcacaacatgccttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccacatgcctatgcagggacctggaccc
aatcaactgaatatgacaaacagttccatgaatatgccttcaagtagccatggatccatg
ggaggttacaaccattctgtgccatcatcacagagcatgccggtgcagaatcagatgaca
atgagtcaagggcagccaatgggcaactatggccccagaccaaatatgaatatgcaacca
aaccaaggtccaatgatgcatcagcagcctccttctcagcagtacaatatgccacaggga
ggagggcagcattaccaaggacagcagccacccatgggaatgatgggtcaggttaaccaa
ggcaatcacatgatgggtcagagacagattcctccctatagaccgcctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcagtattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaattcacaatatggccagcaacaagatgcttaccaaggaccacct
ccgcaacaaggatacccaccccagcagcagcagtatcctgggcagcagggttacccagga
caacaacagggctatggtccttcccagggtggtccaggtcctcagtatcctacctatcca
caaggacaaggtcaacagtatgggggatacagaccaacacagcctggaccaccccagcca
ccccagcagaggccttatgggtatgaccagggacagtatggaaattaccagcagtga
DBGET
integrated database retrieval system
