KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122104315
Entry
122104315         CDS       T07891                                 
Symbol
Rnf125
Name
(RefSeq) E3 ubiquitin-protein ligase RNF125
  KO
K12170  E3 ubiquitin-protein ligase RNF125 [EC:2.3.2.27]
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    122104315 (Rnf125)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dsp04121]
    122104315 (Rnf125)
Enzymes [BR:dsp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122104315 (Rnf125)
Ubiquitin system [BR:dsp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122104315 (Rnf125)
SSDB
Motif
Pfam: zf_C2HC_14 zf-Di19 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-RING_5 TRAF3_RING U-box RING_XB3-XBAT31 Prok-RING_4 zf-Nse zf-RING_6 zf-RING_10 zf-rbx1 Sina_RING Rad50_zn_hook
Other DBs
NCBI-GeneID: 122104315
NCBI-ProteinID: XP_042531062
LinkDB
Position
Unknown
AA seq 232 aa
MGSLLSSDSGKSAPASATPRALERRGDPELPVTSFDCSVCLEVLHRPVRTRCGHVFCRSC
IATSLKSNKWTCPYCRAYLPSEGVPATDVAKRMKLEYQNCTECDTLVCLSEMRAHIRACE
KYIDKYGPLQELSETATRCVCPFCQKELDEDSLLDHCITHHRSERRPVFCPLCRLTPNES
PSSFNGSLIRHLQVSHTLFYDDFIDFDIIEEALIRRVLDRSLLEYVNHSNAT
NT seq 699 nt   +upstreamnt  +downstreamnt
atgggctccctgctgagcagcgacagcggtaaatccgcgccggcctcggccaccccgcgg
gccctggagcgccggggggaccccgagctgcccgtcacgtctttcgattgctccgtgtgt
ttggaggtgttgcaccgacccgtccggacccgctgtggccacgtattctgccgttcctgt
atcgctaccagtctaaagagcaataagtggacctgtccatattgccgggcatatcttcct
tcagaaggagttccagcaactgatgtagctaaaagaatgaaattagagtaccagaactgc
acggagtgtgataccctggtttgcctcagtgaaatgagggcgcacataagggcatgtgag
aaatacatcgataagtatggaccgctacaagaactttcagagacagcaacgagatgtgtg
tgtccattttgtcagaaagaattggatgaagacagcttactggatcattgtattactcat
cacagatcagaaaggagacctgtgttttgtcctctttgccgcttaacacctaatgagagt
ccaagcagcttcaatggcagtttaataagacatttgcaagttagtcatactttgttttat
gatgatttcatagattttgatataattgaggaagctcttatccgaagagtcttagatcga
tcacttcttgaatatgtgaatcactccaatgccacataa

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