Dipodomys spectabilis (banner-tailed kangaroo rat): 122104433
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Entry
122104433 CDS
T07891
Symbol
Thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122104433 (Thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
122104433 (Thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122104433 (Thoc1)
03041 Spliceosome [BR:
dsp03041
]
122104433 (Thoc1)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122104433 (Thoc1)
Spliceosome [BR:
dsp03041
]
Complex C
Other components
EJC/TREX
122104433 (Thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122104433 (Thoc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
122104433
NCBI-ProteinID:
XP_042531288
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHSEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVVRKRAAPE
DFLGKGANKKILMGNDELTRLWNLCPDNMEACKSDTREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQLELFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPDSLISALNKSGLSDLAESLTNDETNS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgccagaagcgcggacgcggtttacgaaatct
accagagaggccttaaacaacaaaaatatcaagccattgttgaataccttcagccagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaggctttcagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaatgttttagctattatctctcttgctatt
gggggagtaactgaaggtatttgtactgcatctacaccttttgtgttgttgggagatgtt
ttggattgtcttcctttggaccaatgtgatacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcttaagaagattatcaaagtcccagaatacagtcttctgtggacgaattcaa
ctctttttggccagactttttcctctatctgaaaagtcaggacttaacttacagagtcag
tttaacctggaaaatgttactgtcttcaataccaatgagcaggaaagcaccctgggtcag
aagcactctgaggatagagaggaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaactacttgctctattcccatcgattacaacctgtatagaaaattctggtca
cttcaggattacttcaggaacccagtacaatgctatgaaaagatttcatggaaaactttt
ctcaagtattctgaagaagttctagctgtttttaagagttataaattagatgatactcag
gcatccagaaaaaagatggaagagctgaaaacaggaggggaacatgtctattttgcaaaa
tttttaacaagtgaaaagttgatggatttacagctgagtgacagtaattttcggcgacat
atcctgttgcagtatctcattttattccagtatctcaaagggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtc
tatcaactactatctgaaaacccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaattggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaaggacatcagataccaagcccacaagagtggtacggaagagagcagccccagaa
gacttcctaggcaaaggagcaaacaaaaaaatactcatgggaaatgacgaattaacaagg
ctttggaatctctgtccagacaatatggaagcctgtaaatcagacacaagggaatacatg
ccaactttggaggagttctttgaagaagccattgaacaagcagatcctgaaaacatggtt
gaaaatgaatataaagctgtgaacaattcaaattatggttggagagccctcagactatta
gcacggagaagccctcatttcttccaaccaaccaaccagcaattcaaaagtttgccagaa
taccttgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaagaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagataaacctgtcactggggaacagctagagttatttgccaataag
cttggcgaacaatggaagattctggctccatacttggaaatgaaagactctgaaattagg
cagattgaatgtgacagtgaagacatgaagatgcgagccaagcagctcctggttgcctgg
caggatcaagaaggagtccacgcaacacctgatagtctgattagtgcactaaacaagtct
ggattaagtgaccttgcagaaagtctaactaatgacgagacaaatagttag
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