Dipodomys spectabilis (banner-tailed kangaroo rat): 122104662
Help
Entry
122104662 CDS
T07891
Symbol
Atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04136
Autophagy - other
dsp04140
Autophagy - animal
dsp05010
Alzheimer disease
dsp05014
Amyotrophic lateral sclerosis
dsp05016
Huntington disease
dsp05017
Spinocerebellar ataxia
dsp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122104662 (Atg2a)
04136 Autophagy - other
122104662 (Atg2a)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122104662 (Atg2a)
05014 Amyotrophic lateral sclerosis
122104662 (Atg2a)
05016 Huntington disease
122104662 (Atg2a)
05017 Spinocerebellar ataxia
122104662 (Atg2a)
05022 Pathways of neurodegeneration - multiple diseases
122104662 (Atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122104662 (Atg2a)
03029 Mitochondrial biogenesis [BR:
dsp03029
]
122104662 (Atg2a)
Membrane trafficking [BR:
dsp04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122104662 (Atg2a)
Mitochondrial biogenesis [BR:
dsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122104662 (Atg2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
122104662
NCBI-ProteinID:
XP_042531528
LinkDB
All DBs
Position
Unknown
AA seq
1940 aa
AA seq
DB search
MSRWLWPWSNCVKERVCRYLLHHYLGHFFQEHLSLDQLSLDLYKGSVALRDIHLENWSVN
EVLESMDSPLELVEGFVGSIEVAVPWAALLTDHCTVRVSGLQLTLQPRQSPGPGAADSQS
WASCMTTSLQLAQECLRNGLPEPSEPPQPLEGLEMFAQTIETVLRRIKVTFLDSVVRIEH
SPGDGEHGVAMEIHVQRLEYCDESVRDPGQAPPVDVHQPPAFLHKMLQLAGVRLYFEELP
SQAEPPEPPLQIGSCSGYMELIVKLKQNEAFPGPKLEVAGQLGSLHLLLTPQRLQQLQDL
LSAISLTAPEGLADKLNKSRPLGAEDLWLIEQDLNQQLQAGAVAEPLSPDPVTNPLLNLD
SPDLFFSMAGLTSSVASAVSELSLSDVDLNSSVHSNMASHRLSAPAHPAGKTAPTPVPGT
MRPDSLLKMTLGGVTLTLLQTSAPASGPPDLTTHFFTEFDATKDGPFGSRDFQHLRPRFQ
KACPCSHVRLTGTAVQLSWELWASSRGRRTTTTELHFGQLEVLECLWPKGSSEPEYTEIL
SFPSNLSTQASVRPCGHLRHTQTLRRLPKSRARRSVACHCHSEVVLDLEEFQADVELGAL
DRFAALLHLATVPHKPPAGLLTEPPWASEQQTVFRLSAPRATLRLRFPIADLRPERDPWA
GRAVRTEQLRLELSEPQFRSELSSGPGPPVSTRLELTFSDLHGIYEDGEKPPIPCLRIAK
SVDPKNIGRKYFLPQVVVTLNPQSSDTQWETGPDKSEDLELSTESPCELREPEPSPFSSK
RTMYETEEMVIPGDPEEMRTFQTRTLALSRCSLEVLLPSAHVFLPSKEVYESIYNRINND
LLMWEPADLFPSPGPATHPSGFPGSSGFWHDNFKMCKSAFKLDSDSDEEDVKFFSVGASS
VPQPPAPDPPRHHSQSTFSTMVKVLKGRITAFCEAKDEDGKRQEGRHGELVLDVDHGTIF
NVSQYRGQPGFGYFCVEAEKATLYHRAAVGDALLPSHLELPSFAPPAHLAPTIYPSEEGL
TERGSSGRKGQGQGQSLPMLSAAVRIHLDPHKNIKEFLVTLRLYKATLRHYMALPEQSWY
SQLLEFLDVLDDPVLGYLPPTVITVLHTHLFSCAVDYRPLYLPVRVLATTETFTLSSNIV
MDTSTFLLRFILDDSALYLSDKCEVESLDLRRDYVCVLDIDLLELVIKTWKGSTEGKLSQ
PLFELRCSNNVVHVHSCADSCALLANLLQYVTSSGDLHPPPRPPSPTEIAGQKVQLSESP
ATLPSCPPVETALINQRDLTDALLDTERSLRELAQPSGDPLLPQDSPISVYLFPGERSAA
RAPSPPPGGPAGTLGSFPEGKAHEKEEEGDGDTMDSDEFCILDAPGLGIPPRDGEPVVTQ
LHPGPIVLQDGYFSRPLGSTDLLRAPAHFPVPSSRVVLREVSLIWHLYGGRDFGPYPSHR
ARVGLAGPRSSPSRCSGPNRPQNSWRTQGGSGRQHQVLMEIQLSKVSFQHEVYPEEPEPE
PDTDTGTDTDRAPGQELEERPLSRQVLIVQELEIRDRLASSQINKFLHLHTSERLPRRTH
SNMLTIKALHVAPTTSPGGPECCLRVSLMPLRLNVDQDALFFLKDFFTSLVAGINPIFPG
EPSEARSETRGRPGSPQDGQPEEMSGSQEASGGSRSSSAEQQPIYFREFRFTSEVPICLD
YHGKHVTMDQVGTFAGLLIGLAQLNCSELKLKRLCCRHGLLGVDKVLGYALNEWLQDIRK
NQLPGLLGGVGPMHSVVQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASAAL
ELSNRLVQAIQATAETVYDILSPAAPISRSLQDKRSAQRLRKGQQPADLREGVAKAYDTV
REGILDTAQTICDVAARGHEQKGLTGAVGGVIRQLPPTVVKPIIVASEATSNVLGGIRNQ
ILPDAHKDHALKWRSEEAQD
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatggctgtggccatggtcgaactgtgtgaaagaacgggtctgccgctacttg
ctacaccactacttgggtcacttcttccaagaacatctgagcctggaccaactcagcctg
gatctgtacaagggcagcgttgccctgcgggatatccacctggagaactggtctgtgaac
gaggtgctggagtcgatggattcaccgctggagctggtggaaggctttgtgggctccatc
gaggtggctgtgccctgggctgcgctactcactgaccactgcacggtgcgtgtgtcgggc
ctccagctcaccctgcagccccgccaaagcccagggccaggggctgctgactcgcagagc
tgggcttcctgcatgaccacaagcctgcagctggctcaggagtgtcttcggaatgggctt
cccgagccctcagagcctccacagcccctagaggggctggaaatgtttgcccagaccatc
gagacagtgctgcggaggatcaaggtgacctttctggacagtgtggtgaggatagagcac
tctccgggcgatggggagcatggcgtggccatggagatccacgtgcagagactggagtac
tgtgacgagtctgtgcgagatccaggccaggcacctccggtggacgtgcaccagccaccc
gccttcctacacaagatgctgcagttggcgggggtccgcctgtacttcgaagagctcccc
tcacaggcagagccaccagagcctcccttgcagattggcagctgttcggggtacatggag
ctaatagtgaagctgaagcagaacgaggcctttccaggacctaagctggaggtggcgggg
cagctgggctccctgcacctgctcctgaccccacagaggctccagcagctccaggacctg
ctcagtgccatcagtctcacagccccagaaggccttgctgacaagctgaacaagagtcgc
ccactaggtgctgaagacctgtggctgatcgaacaggatctgaaccagcagctacaggca
ggcgctgtggccgagcccctcagcccagaccctgtgaccaaccccctcctcaacctggac
agtcctgacctcttcttctccatggctggcctcacaagcagcgtggcctcagcagtctct
gagctctccctctctgacgtagacctaaattcctccgtgcacagcaacatggcctcccac
cgactctctgccccagcccacccagctggcaagacagccccaactcctgttccgggcacc
atgcgccctgactcgctgctgaagatgaccttgggtggcgtgaccctgactttgctccag
acatctgccccagcttctggaccacctgacctcactacccacttttttactgagtttgat
gccaccaaggatgggccatttggctcgcgagacttccagcaccttcggccacgcttccag
aaggcttgcccctgcagccatgtccggctcacgggcacagctgtccagctgtcctgggaa
ctgtgggcaagcagccggggccggcggactaccaccacagaattgcacttcgggcagctg
gaggtcctagagtgcctgtggcccaagggctcttcagaacccgaatacacagagatcctg
agtttccccagtaacctgagtacccaggcctcagttcggccctgtgggcacctacgccat
acacagaccctgcgccggctgccaaagagccgggcccggcgctctgttgcctgccactgc
cattcagaagtggtcctggacctggaggaattccaggcagatgtggaactgggggctctg
gaccgatttgctgccctgctgcacttggccactgtaccccacaagccacccgctggtcta
ctgacagagcccccgtgggcttcagagcaacagacagtgtttcggctttctgcaccccgg
gccacgctgcggctgcgcttccctattgctgatctgaggcctgagcgggacccctgggca
ggccgggctgtgcggacagagcagctgcgactggaactgagtgagccccagttccggtca
gagctcagcagcgggcctggccccccggtttccacccgcctggagctcaccttttctgac
ctgcatggaatctacgaagatggagagaagccacccatcccttgcctaaggattgccaaa
tctgtggaccccaagaacattgggcgcaagtacttcctgccacaggtagtggtgaccctg
aacccccagtccagtgacacacagtgggagacgggtccggacaagagcgaggacctggag
ctatccacggaaagtccatgcgagctacgggagcctgagccctcacccttctcctctaag
aggaccatgtacgagaccgaggagatggtgatccctggagatcctgaggagatgaggaca
ttccagacccggacgctagccctctcccgctgtagcctggaagtactcctgcccagtgcg
catgtcttcctgcccagcaaagaggtctacgaaagcatctacaacaggatcaacaatgac
ctgctcatgtgggaacccgcagacctgtttcccagccctggtcctgccactcacccctca
ggctttccaggctcctctggcttctggcatgacaacttcaaaatgtgcaagtccgccttc
aagctggattcagactctgatgaagaagatgtcaagttcttctcagtaggcgcttcgagt
gtccctcaacctcctgcccctgatcccccaagacatcactcacagagtaccttctctacc
atggtgaaagtactgaagggtcggatcacagccttctgtgaggctaaggatgaagatggg
aagcgacaggaggggcggcatggggagctggtactggatgtggaccatggcaccatcttc
aacgtctcccagtaccgtggccagccagggttcggttacttctgtgtggaagctgaaaag
gcaacactgtatcaccgagcggctgtgggcgatgccctgttgcccagtcacttggaactg
cccagctttgcccctccggcccacctggcgcccaccatctacccatcggaggaagggttg
actgagcggggatcctcaggccggaaggggcagggccaaggccagagcctccccatgctg
tccgccgctgtgcgcatccacctagatccccacaagaacatcaaggagttcctggtgacg
ctgcggctctataaagccaccctgcgccactacatggccttgcctgaacagagctggtac
tcccagctgttggagttcttggacgtgctggatgaccccgtgctgggctacctgccccca
accgtcatcactgtcctgcacacacacctgttctcctgtgctgtggattacaggcccctg
tacctccccgtgcgcgtcctcgctaccactgagaccttcaccctctccagcaatatcgtc
atggacacgtcgaccttcctgctcaggttcatcctcgatgactctgccttgtacctgtcg
gacaagtgtgaggtggagagcctggatctgcggcgagattatgtctgcgtccttgacatc
gacctcctggagctcgtgatcaaaacctggaagggcagcaccgagggcaaactgagccag
ccgctgtttgagttgcgctgctccaacaacgtggtccatgtgcacagctgcgccgactcc
tgcgccctgctggccaatctgctccagtatgtcacaagctccggcgacctgcacccccca
ccccgaccccctagccccacggagatcgccggccagaaggtacagctctccgagagccca
gccaccctgccttcatgccccccagtggagacagccctcatcaaccagcgggacctgacc
gatgccctcctggacactgaacgcagcctgcgggagctggcccagccctcaggtgacccc
cttcttcctcaagactcgcccatttccgtctacctgttccctggtgaacggagtgcggct
cgggctccttcgccccctcctgggggccctgctggcaccttagggtctttccctgagggt
aaggcccacgagaaggaggaggagggagatggagacaccatggacagtgatgagttctgc
atcctcgatgcccctggcctgggcattccgccccgggatggagaacccgtggtaacgcag
ctgcatccaggccccatcgtcctgcaggacggatacttctctcggcccctgggcagcaca
gacctgctgcgggcacctgctcatttcccggtgcccagcagccgtgtggtgctacgtgag
gtttctctcatctggcatctctacgggggccgagactttggcccctaccccagccataga
gcaagagttggcctcgcaggccccaggagttctccttcccgctgctctggccccaaccgg
cctcagaactcgtggcgcacacaaggtggcagtgggcgtcagcaccaggttctcatggag
atccagctcagcaaggtgagtttccagcatgaagtgtatcccgaggagccggagccggag
ccagacacagacacgggcaccgacacagacagggcccctggccaggagctggaggagcgg
ccgctgtcccgccaggtgctcattgtgcaggagctggagattcgagaccggctggcctcc
tcccagatcaacaagttcctgcacctgcacacgagcgagcggctgccccgccgcacacac
tccaacatgctcaccatcaaagccctgcacgtggcccccaccaccagccccggcgggcct
gagtgctgtctccgggtctccctgatgcctctgcggctcaacgtggaccaggatgccctc
ttcttcctcaaggacttctttaccagcctggtggctggtatcaaccccatattcccagga
gagccctctgaggctcgctctgagactcgaggccggcctggcagcccccaggacgggcag
ccggaggagatgagcggctcccaggaggcctcaggcggcagccgcagctcctctgcagaa
cagcagcccatctacttccgggagttccgcttcacatccgaggtgcccatctgtctggat
taccacggcaagcacgtcaccatggaccaggtgggcacttttgccgggctcctcattggc
ttggcccagctcaactgttcggagctgaagctcaagcggctctgctgccgccacgggctt
ctgggggtggacaaggtgctgggctatgccctcaacgaatggctgcaggatatccgcaag
aaccagctgcccggcctgctggggggcgtgggccctatgcactcagttgttcagctcttc
caagggttccgagacctgctgtggctgcccattgagcagtaccggaaggacgggcgcctc
atgcggggactgcagcgcggggccgcttccttcggctcctccacagcctctgctgccctg
gaactgagcaaccggctggtccaggccatccaggccacagctgagacggtatacgacatc
ctgtccccggcagcacccatctcccgctccctacaggacaagcgctctgcacagaggctg
cgcaaaggccagcagcccgctgacctgcgggagggcgtggccaaggcctatgacacagtt
cgagagggcatcctggatacagctcagaccatctgtgatgtggcagcacgtggccacgag
cagaaggggctgacaggcgccgtggggggcgtgatccgccagctgcccccaacggtggtg
aagccaatcattgtggcctcagaggccacgtccaacgtcctcgggggcatccgcaaccag
atcttgcccgacgctcataaggaccatgccctcaagtggcgctcggaggaggcccaagac
tga
DBGET
integrated database retrieval system
