Dipodomys spectabilis (banner-tailed kangaroo rat): 122104936
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Entry
122104936 CDS
T07891
Symbol
Syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04120
Ubiquitin mediated proteolysis
dsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122104936 (Syvn1)
04120 Ubiquitin mediated proteolysis
122104936 (Syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122104936 (Syvn1)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122104936 (Syvn1)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122104936 (Syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122104936
NCBI-ProteinID:
XP_042531902
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFVKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAVDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAALSRPSGAT
TSTAAGSAPAPGSAPAPEAGPAPAFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTPEEL
RALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATVSPTEETASTV
VTAPSSASNPSSEAPPPPPETSPPASEMEKPPAPETVGAEELPEDGEPDAAELRRRRLQK
LEAPVAH
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcactgaccggagccgtggtggca
catgcctactacctcaaacaccagttctaccccactgtggtatacttgaccaagtccagc
cccagcatggcagtcctgtatatacaggcctttgtccttgtcttcctgttgggcaaggtg
atgggcaaagtgttctttgggcagctgagggcagcagagatggagcaccttttggagcgt
tcctggtatgccgtcacagagacttgtctggccttcactgtctttcgggatgacttcagt
ccccgctttgtcgcactcttcactctcctcctctttctcaaatgtttccactggctggca
gaggaccgggtggactttatggaacgaagccccaatatctcctggctctttcactgccgc
atcgtctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
catagcatcctgacccggggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgaccatggtgctgaccatcttcgtcaagtacgtgttgcactctgtggacctccag
agcgagaacccttgggacaataaggctgtgtacatgctctacacagagctcttcacaggc
ttcatcaaggttctgttgtacatggccttcatgaccatcatgatcaaggtacacaccttc
ccactctttgccatccggcccatgtacctggccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagcaatccgcaacatgaacacactgtatccagatgccacc
cctgaggaactccaggcagtggacaacgtctgcatcatctgccgagaggagatggtgact
ggtgccaagagactgccctgcaaccacatcttccacaccagctgcctgcgctcctggttc
cagaggcagcagacctgccctacctgccgtatggatgtcctacgggcatcactgccagcc
cagtcaccaccgccccctgagcctgcggaccaggggccacccccagccccccacccccca
ccactcctgccccagccccctaacttcccccagggcctcctgcctccttttcctccaggc
atgttcccactgtggccacccatgggcccctttccgcctgtcccgcctcccccgagctca
ggcgaggctgtggccccgccctccaccagtgcagccctttctcggcccagtggagcaacc
acaagcacagctgctggttcggcccctgcacctggctccgcccccgcccccgaagctggc
cccgcccctgccttcccattccctcctccctggatgggtatgcccctgcctccacccttc
gccttcccgcccatgcctgtaccccccgcgggctttgcggggctgaccccggaggagctg
cgggctctggagggccacgagcgccagcacctggaggcccggctgcagagcctgcgcaac
atccacacgctgctggacgcggccatgctgcagatcaatcagtacctcactgtgctggcc
tccctggggccccccaggcctgccactgtcagccccaccgaagagacagcctcaacagtg
gttactgctccgtcctccgccagcaaccccagctctgaggctccccctccgcccccagaa
acctccccaccagcctctgaaatggaaaagcctccggctcctgagacagtgggtgccgag
gagctgcctgaggatggagagcctgatgctgccgagctccgccggcgccgcctgcagaag
ctggaggcccccgttgcccactga
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