Dipodomys spectabilis (banner-tailed kangaroo rat): 122105025
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Entry
122105025 CDS
T07891
Symbol
Dtx4
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122105025 (Dtx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122105025 (Dtx4)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122105025 (Dtx4)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122105025 (Dtx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_2
WWE_5
zf-RING_11
zf-RING_5
zf_RING_Vps8
zf-RING_16
PHD_NSD
zf-ANAPC11
PHD
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
122105025
NCBI-ProteinID:
XP_042532049
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVVRAGPRAGGSVVLGQVDGRLAPYIIDL
QSMNQFRQDTGTLRPVRRNYYDPSSAPGKGVVWEWENDNGSWTPYDMEVGITIQHAYERQ
HPWIDLTSIGFSYVIDFSTMGQINRQTQRQRRVRRRLDLIYPMVTGTLPKAQSWPANPAS
AASPPAPPCSCPQCVLVMSVKAAVVNGGALQPPLSRKNGAPSATAKLPPPPGPGVKPPDA
TGTLRAPPKAPASQATRRQVSSAAPAGAAAGAAAAAPAASSKTGRVALATLNRTNLQRLA
IAQSRVLIASGVPTVPVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPV
SKSEIKSIPGVSNTSRKTTKKQAKKGKTPEEVLKKYLQKVRHPPEEDCTICMERLTAPSG
YKGPQPTIKPDLVGKLSRCGHVYHIYCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPG
KMEYHLIPHSLPGHPDCKTIRIIYSIPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGR
KVLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVL
AELAAQGISEDSASQDKD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctcctggcctcggccgtggtggtctgggaatggctgaacgagcacggccgctggcgg
ccctacagccccgccgtgagccaccacatcgaggcggtggtccgcgccgggccccgcgcg
gggggcagcgtggtgctgggccaggtggacggccgcctggcgccctacatcatcgacctg
cagtccatgaaccagttccggcaagacacgggaaccctgcgtcctgtccgccgcaactac
tatgacccatcttcggccccggggaagggcgtggtgtgggaatgggaaaacgacaacggc
tcctggacgccctacgacatggaagtgggcatcaccatccagcacgcctacgagaggcag
cacccctggatcgacctcacctccatcggcttcagctatgtcatcgacttcagcaccatg
ggccagatcaaccggcagacccagcgccagcgccgggtgcggcgccggctcgacctcatc
tacccgatggtcaccgggaccctgcccaaggcgcagtcctggccggccaacccggcctcg
gccgcctcgcccccggctccaccctgctcctgtccacagtgtgtgctggtgatgagtgtc
aaggcggccgtggtcaacgggggagccctgcagccccccctaagccgcaagaacggggct
ccctccgccacggccaagctgcctccgccccccggcccgggagtcaagccaccggatgcc
acgggcacccttcgagccccgcccaaggcccccgcgtcgcaggcgacccggcgacaggtg
tccagcgcagcaccagccggggcagccgcgggagctgcggccgccgcccctgcagccagc
agcaagacgggacgggtagccctggccaccttgaatcggaccaaccttcaacgactggcc
atcgcgcagtcccgagtgctgatcgcctccggagttcctactgtcccagtaaaaaactta
aatggatccagtcctgtcaaccctgccctggcaggaatcactgggatcctcatgagcgcc
gctggattgcctgtgtgtctcaccagaccaccgaagctggtcctccacccgccccctgtc
agcaagagcgaaatcaaatccatccccggagtttctaacacaagccgcaagaccaccaaa
aagcaagctaagaaaggtaaaaccccagaggaagtactgaagaagtatctgcagaaggtc
cggcatccaccagaggaggactgcaccatctgcatggagcgcctcacagccccctcaggt
tacaagggcccacagccaaccatcaagcctgacctggtgggcaagctgtcccgatgtgga
catgtctaccatatctactgcctggtggccatgtacaataacgggaacaaggatggtagt
ctgcagtgtccaacctgtaagaccatttatggggtgaagacaggcacccagcctcccggg
aagatggagtaccacctcatcccgcactctttgcctggccacccagactgcaaaaccatc
cggattatctacagcatcccccctggcattcagggtccagaacacccgaatcctggaaag
agtttcagtgcccgtggtttcccaagacactgctatcttccagacagtgagaaagggaga
aaagttctgaagctgctgcttgtggcctgggaccgccgcctcatctttgctatcgggacc
tccagtaccacgggcgagtcagacaccgtcatttggaacgaagtgcaccacaagacagag
tttggctctaacctcactggccacggctacccagatgccaattacttggataacgtgctg
gctgaattggctgcccagggcatctcagaggacagcgcttcccaggacaaggactga
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