Dipodomys spectabilis (banner-tailed kangaroo rat): 122105291
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Entry
122105291 CDS
T07891
Symbol
Fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03030
DNA replication
dsp03410
Base excision repair
dsp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122105291 (Fen1)
03410 Base excision repair
122105291 (Fen1)
03450 Non-homologous end-joining
122105291 (Fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsp03032
]
122105291 (Fen1)
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122105291 (Fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsp04147
]
122105291 (Fen1)
DNA replication proteins [BR:
dsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
122105291 (Fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
122105291 (Fen1)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
122105291 (Fen1)
Exosome [BR:
dsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122105291 (Fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
XPG_I_2
DUF3560
HHH_5
Motif
Other DBs
NCBI-GeneID:
122105291
NCBI-ProteinID:
XP_042532411
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET
TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRGERRAEAERQLQEAQAAGAE
EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLNRILQELGLNQEQFVDLCILLGSDYCESIRG
IGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHKEAQQLFLEPEVLDAESVELKWSE
PNEEELVKFMCGEKQFSEDRIRSGVKRLSKSRQGSTQGRLDDFFKVTGSLSSAKRKQPEP
KGAAKKKAKTGAAGKFKRGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcaaggcctggccaaactaattgccgatgtggcccccagtgccatccgggag
aatgacatcaagagctactttggccgcaaagtggccattgatgcctccatgagcatttat
cagttcctgatcgctgttcgtcagggtggagatgtactccagaatgaggagggggagacc
acgagccacctgatgggcatgttctaccgtaccatccgcatgatggagaacggcatcaag
ccggtgtacgtctttgacggcaaaccaccgcagctcaagtcaggcgagctggccaaacgc
ggtgagcggcgagccgaggcagagaggcagctgcaggaggctcaggcggccggggccgag
gaagaggtagagaaattcaccaaacggctagtgaaggtcactaagcagcacaacgacgag
tgcaagcatctgctgagcctcatgggaatcccatatctggatgcccccagcgaggcagag
gccagctgtgctgccctggtgaaagccggcaaggtctacgctgcggccactgaagacatg
gactgcctcacgttcggcagccctgtgctgatgcgacacctgacagccagcgaggccaag
aagctgcccatccaggaattccacctgaaccggattctgcaggagctgggtctgaaccag
gagcagtttgtggatctgtgcatcctgctgggcagcgactactgtgagagcatccggggc
atcgggcccaagcgggccgtagacctcatccagaagcacaagagcatcgaggagatcgtg
cggcggcttgaccccaacaaataccctgtgccggaaaactggctccacaaggaggcccaa
cagctcttcctggagcctgaggtcctggatgcagagtccgtggagctgaagtggagtgag
ccaaatgaagaagagctggtcaagttcatgtgtggtgaaaagcagttctctgaggatcga
atccgcagtggggtcaagcggctgagcaagagccgccaaggtagcacccagggccgcctg
gacgatttcttcaaggtcaccggctcgctctcctcagctaagcgtaagcagccagaaccc
aagggggctgcgaagaagaaggccaagactggggcagcggggaagttcaaaaggggaaaa
taa
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