Dipodomys spectabilis (banner-tailed kangaroo rat): 122105297
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Entry
122105297 CDS
T07891
Symbol
Fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122105297 (Fubp1)
03041 Spliceosome [BR:
dsp03041
]
122105297 (Fubp1)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122105297 (Fubp1)
Spliceosome [BR:
dsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122105297 (Fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
SIMPL
Motif
Other DBs
NCBI-GeneID:
122105297
NCBI-ProteinID:
XP_042532429
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
GGQKRPLEDGDQPDAKKVAPQNDSFGTQMPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGG
EQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHG
DGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGD
PYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKK
IQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRG
RGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNA
DPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGAP
MGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKTGTDPNSAAWAAY
YAHYYQQQAQPPPAAPAGAPTTTQTNGQGNYGDQQNPAPAGQVDYTKAWEEYYKKMGQAV
PAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCLPRPSTLGSAAKSN
SAEDAASTKS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcagactactcgacggtgcctccaccctcctccggctcggctggcggcggcggcggc
ggcggcggcggcggcggcgtgaacgatgctttcaaagatgcgttgcagcgagcccggcag
attgctgcaaaaattgggggtgatgctggtacatcattaaattcaaatgactatggctat
ggaggacaaaaaagacctttagaagatggagatcaaccagatgctaagaaagttgctcct
caaaatgactcttttggaacacagatgccaccaatgcatcaacagcaaagcagatctgta
atgacagaagaatacaaagttccagatggaatggttggatttataattggcagaggaggt
gaacagatctcacgcatacagcaagaatctggatgcaaaatacagatagctcctgacagt
ggtggcctaccagaaaggtcttgtatgttaactggaacacctgaatctgtccagtcagca
aaacgattattggaccagattgttgagaaaggaagaccagcccctggctttcatcatggt
gatggacctggaaatgcagttcaagaaatcatgattccagctagcaaggcaggattagtt
attggaaaagggggagagactattaaacaacttcaggaacgggctggagttaaaatggtt
atgattcaggatggacctcagaacactggtgctgacaaaccgcttaggattacaggcgac
ccatataaagttcaacaagccaaggaaatggtgttagagttaattcgtgatcaaggtggt
ttcagagaagttcggaatgagtacgggtcaagaattggagggaatgaagggatagatgtc
cccattccgaggtttgctgttggcattgtaattggaagaaatggagagatgatcaaaaaa
atacaaaatgatgctggtgttcgaattcagtttaaaccagatgatggaacaacacctgat
agaatagcacaaataacaggacctccagaccgttgtcagcatgctgcagaaattattaca
gaccttcttcgaagtgttcaggctggtaatcctggtggacctggacctggtggtcgagga
agaggtagaggtcaaggcaactggaacatgggaccacctggtggactacaggaatttaat
tttatcgtgccaactgggaaaactggattaataataggaaaaggtggtgaaaccataaaa
agtataagtcaacagtctggtgcaagaatagaacttcagagaaatcctccacctaatgca
gatcctaatatgaaattattcacaattcgtggcactccacaacaaatagactatgctcgt
caactcatagaggaaaagattggtggcccagtaaatcctttagggccacctgtaccccac
gggccccatggtgtcccaggcccccatgggcctcctgggccaccagggcctggagctcca
atgggaccatacaaccctgcaccttataatccaggaccgcctggcccagctcctcatggt
cctccagccccgtatgctccccagggatggggaaatgcatatccacattggcaacaacag
gctcctcctgatccagctaaaacaggaacggatccaaattcagcagcttgggctgcttat
tatgctcactattaccaacaacaagcacagccaccacctgcagctcctgcgggtgcacca
acaacaacccaaactaatggacaaggtaactatggagatcagcagaatccagctccagct
ggacaggttgattacaccaaggcttgggaagagtactacaagaaaatgggtcaagcagtt
cctgctcctactggtgctccaccaggtggtcagccagattatagtgcagcctgggcagag
tattatagacagcaagcagcctactatgcccagacaagtccccagggaatgccacagcat
cctccagcacctcagtgccttcccagaccttccaccttaggttctgctgcaaaaagcaac
agtgctgaagatgctgcaagcaccaaatcatag
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