Dipodomys spectabilis (banner-tailed kangaroo rat): 122105621
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Entry
122105621 CDS
T07891
Symbol
Robo1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04360
Axon guidance
dsp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122105621 (Robo1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122105621 (Robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122105621 (Robo1)
Cell adhesion molecules [BR:
dsp04515
]
Immunoglobulin superfamily
ROBO family
122105621 (Robo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Ig_PDGFR_d4
Unc5_NetrinR_N
DUF7908
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
122105621
NCBI-ProteinID:
XP_042532873
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT
IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSA
EFKCEARGDPVPTVRWRKDDGELPKARYEIRDDHTLKIRKVMASDMGSYTCVAENMVGKA
EASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPV
IRQGPVNQTVAVDGTLVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAK
LGDTGRYTCTASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAVKGLKPNAIYLFLVRA
ANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSAIEVHWT
VDQQSQYIQGYKILYRPSGVSHGESEWSVYEVRTPTKNSVVIPDLRKGVNYEIKARPFFN
EFQGADSEIKFAKTLEEAPSAPPQSVTVAKNDENGTAILVSWRPPPEDTQNGMVQEYKVW
CLGNETRYHINKTVDGSTFSVVIPSLVPGVRYSVEVAASTGAGPGVKSEPQFIQLDSHGN
PVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIR
KVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPAAQPWLADTWPNTGNNHNDCSINCCT
AGTGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSP
NLKDGRFVNPSGQPTPYATTQLIQSNLSHNMNNGGEDSSEKHWKPPGQQKPEVAPIQYNI
IEQNKLNKDYRANDAVPPTIPYNQPYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPK
QGGMNWADLLPPPPAHPPPHSNSEEYSVCVDESYEQEMPCPVPPARMYLQQDELEEEEDE
RGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHVQHQPERRRQPV
SPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPA
SSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGL
KVARRQMQDAAGRRHLHASQCPRPTSPVSTDSNMSAAVMHKARPTKKQKHQPGHLRRETY
TDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSIEARTDRSSDRKGGNYKGREVLD
GRQVADLRTNPGDLREAQEQQNDGKGRGNKAIKRDLPPAKTHLIQEDILPYCRPTFPTSN
NPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYEREENNEELEETES
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggagcctgctcacttttacctctttggattaatatgtctctgttcaggctcc
cgccttcgacaagaagattttccacctcgaattgttgagcacccttctgacctcatcgtc
tcaaaaggagaacctgcaaccttgaactgtaaagccgaaggccgcccaacacctacgatt
gagtggtacaaagggggtgagagagtggagaccgacaaagatgaccctcgctcacaccgc
atgctgctgccaagtggatctttatttttcttaagaatagtacatggacggaaaagtagg
cctgacgaaggggtctatgtctgcgttgcaaggaattaccttggagaggctgtgagtcac
aacgcatcgctggaggtagctatactacgggatgatttcagacaaaacccttccgatgtc
atggtggcagtaggagagcctgcggtgatggagtgccagcccccgcgcggccatcctgaa
cccaccatctcgtggaagaaggatggttctcctctggatgataaagatgaaagaataacg
atacgaggaggaaaactcatgataacttacacccgtaaaagcgatgctggcaaatatgtt
tgcgttggtaccaacatggttggagaacgggagagtgaggtagcagagctaactgtttta
gagagaccatcatttgtgaagagacctagcaacttggcggtaactgtggatgacagtgct
gagtttaaatgtgaggcccgtggagaccctgtacctacagtacgatggaggaaagatgat
ggggagctgcccaaagccagatatgaaatccgcgatgatcatacattgaaaattcgcaag
gtgatggctagtgacatgggatcatacacttgtgttgcagaaaatatggttggaaaagct
gaagcatccgctaccttgacagttcaagttgggtctgaacctccacattttgttgtgaaa
ccacgagaccaggtggtggccttgggacgaactgtgactttccaatgtgaagcaactggc
aatcctcagccagctatattttggcggagagagggaagtcagaaccttctcttctcatac
cagcccccacagtcttccagtcgattttcagtgtcccagactggggacctcaccattact
aacgtccagagatcagatgtcgggtattacatctgccagactctaaatgttgctggaagc
atcatcacaaaagcatatctggaagtgactgacgtgattgcagaccgccctcccccagtc
attcgacaaggtcctgtgaaccagactgtagctgtggatggaactttagtgctcagctgt
gtggccacaggcagtccagtgcccacaattctgtggagaaaggatggagtcctggtttca
actcaagattctcgaatcaaacagctggaaactggagtgttacagatccgatatgctaag
ctgggtgacactggccggtacacctgcactgcatcaacccccagtggcgaagcaacgtgg
agtgcttacattgaagtccaagaatttggagttccagttcaacctccaagacccactgac
cccaatttaatccccagtgccccttctaaacctgaagttacagatgtcagcagaaacacc
gtaactttatcatggcaaccaaatttaaattcaggagcaactccaacgtcttatattata
gaagccttcagccatgcctccggtagcagctggcagactgtggctgagaatgtaaaaaca
gaaacatttgccgtcaaaggactcaaacctaatgcaatttaccttttccttgtgagagca
gctaatgcttatggaattagtgatccaagccaaatatcagatccagtgaagacacaagat
gtcccaccaacaagccaaggcgtggaccacaagcaggtccagcgggagctggggaatgtc
gtcctgcatctccacaacccgaccatcctctcctcttccgccattgaagtacactggacc
gtggaccagcagtcccagtacattcaaggatataaaatcctctacaggccatctggagtc
agccatggcgagtcggagtggtcagtttatgaagtgagaacaccaaccaaaaacagtgta
gtcatccctgatctcagaaagggcgtcaactatgaaatcaaagctcgccctttcttcaat
gaatttcaaggagccgatagtgaaatcaaatttgccaaaaccttagaagaagccccaagt
gccccaccccagagcgtaactgttgcaaagaatgatgaaaatggaactgcaatccttgtc
agctggcgcccacctccagaagatacccagaatggaatggtccaagaatataaggtttgg
tgtctgggcaacgagacaagataccatataaacaagacagtagacggctccacattttcc
gtggtcattccctccctggttcctggggtccgatacagtgtagaggtggcagccagtacc
ggggccgggcctggagtgaagagtgagcctcagttcatccagttggattctcacggaaac
cctgtgtcacctgaggatcaggtcagcctggctcagcagatttccgatgtggtgaagcag
ccagcgttcattgcgggaatcggggcagcctgctggatcattctcatggtcttcagcatc
tggctttatcgacaccgcaagaagaggaatggactcaccagtacttatgcgggtatccgg
aaagtcccgtcctttaccttcacaccaacagtcacttatcagagaggaggtgaagctgtg
agcagtggaggcaggccaggacttctgaacatcagcgaacctgcagcacagccctggctg
gcagacacgtggcccaacactggcaacaaccacaatgactgctccatcaactgctgcacg
gctggcaccgggaacagcgacagcaacctgaccacctacagtcgcccagctgattgtata
gcaaattataacaaccaactggataacaaacaaacaaatctgatgctccctgagtcaact
gtttatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagccca
aatctgaaggatgggcgttttgtcaatccatcagggcagccaactccttacgccaccacc
cagctcatccagtccaacctcagccacaacatgaacaatggcggcgaggattcgagcgag
aagcactggaagccacctggtcagcagaagccagaagtcgccccaattcagtataacatc
atcgagcaaaacaagctgaacaaagattatcgagccaatgatgcagttccaccaactatc
ccatacaaccaaccgtatgaccagaacactggaggctcctacaacagttcagatcgagga
agtagtacatctgggagtcaagggcacaagaaaggggcacgaacacccaaggtaccaaaa
caaggaggaatgaactgggcagacttgcttcctcccccgccagcacatcctcctccacac
agcaacagtgaagaatacagtgtttgtgtagatgaaagctatgaacaagaaatgccatgc
cctgtaccaccagcaaggatgtacttgcaacaagatgaattagaagaggaagaagatgaa
agaggccctacaccccctgtgcgaggagcagcatcttctccagctgctgtttcctacagc
catcagtccactgccactttgaccccttccccacaggaggaactccagccaatgttacag
gattgcccagaggagattggccatgtgcagcaccaaccagaaaggagaagacagccagtg
agccctcctccaccaccaagaccaatttccccaccacatacctatggctacatttctgga
cccctggtctcagacatggatacggatgcaccagaggaggaggaagatgaagccgacatg
gaagtcgccaaaatgcaaactagaaggcttttattgcgtgggctggagcagaccccagcc
tcaagtgtaggcgacctggagagctctgtcactgggtctatgatcaatggctggggctca
gcctcagaggaggacaacatttccagtgggcgctccagtgttagttcttctgatggctcc
tttttcaccgacgctgatttcgcccaggctgttgcagcagctgcggagtatgctggtctg
aaagtggcacggcgtcaaatgcaggatgctgctggccgccggcatcttcacgcatctcaa
tgtcctaggcccacaagtcccgtgtctacagacagcaacatgagtgctgctgtcatgcac
aaagccaggcccaccaagaagcaaaaacaccagcccggacacctgcgtcgagaaacctac
acagacgatcttccacctcctccagtgccaccacctgctataaaatcacccactgtccaa
tccaaggcacagctggaggtacgacctgtcatggtgccaaaactcccttccatagaagca
agaacagacagatcatcagatagaaaaggaggcaattacaaggggagagaagtactggat
ggaagacaagttgccgatttgcgaacaaatccaggtgacctgagagaagcacaggagcag
caaaatgatgggaaaggacgaggaaacaaggccataaaacgagaccttccaccagcaaag
actcatctcatccaagaggatattctaccttactgcagacctacctttccaacctcaaat
aatcccagagatcccagctcctcaagctcaatgtcttcaagaggatcaggaagcagacaa
agagaacaagcaaatgtaggccgaagaaacattgcagaaatgcaagtacttggtggatat
gaaagagaagaaaataatgaagaattagaggaaacagaaagctga
DBGET
integrated database retrieval system
