KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122105862
Entry
122105862         CDS       T07891                                 
Symbol
Shh
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04340  Hedgehog signaling pathway
dsp04360  Axon guidance
dsp05200  Pathways in cancer
dsp05205  Proteoglycans in cancer
dsp05217  Basal cell carcinoma
dsp05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    122105862 (Shh)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    122105862 (Shh)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    122105862 (Shh)
   05205 Proteoglycans in cancer
    122105862 (Shh)
  09162 Cancer: specific types
   05226 Gastric cancer
    122105862 (Shh)
   05217 Basal cell carcinoma
    122105862 (Shh)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dsp01002]
    122105862 (Shh)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:dsp00536]
    122105862 (Shh)
Peptidases and inhibitors [BR:dsp01002]
 Cysteine peptidases
  Family C46: hedgehog family
   122105862 (Shh)
Glycosaminoglycan binding proteins [BR:dsp00536]
 Heparan sulfate / Heparin
  Morphogens
   122105862 (Shh)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 VldE Flavodoxin_2 Vint DrmE_C Ribosomal_S6e
Other DBs
NCBI-GeneID: 122105862
NCBI-ProteinID: XP_042533047
LinkDB
Position
Unknown
AA seq 427 aa
MLPPARCLLVVLVSSLLLGSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGV
KLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGWATVHLERGGTKPVRELRPGDRVLAADEQGRLLYSDFLA
FLDRDDRARKVFYVIETREPRARLLLTAAHLLFVAPPHNGSAPAGRRALFASSVRPGQRV
YVASGRGGRRRLRPAAVHRVTVREEAAGAYAPLTAQGTILVNRVLASCYAVIEEHGWAHW
AFAPFRLAHALLAALAPAPARTDGVGAAPAPAPAPGVHWYSQLLYQIGTWLLDSETMHPL
GMAAPAG
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgctgccgccggcccgatgtctgctggtggttctggtctcctcgctgctgctgggctcc
gggctggcgtgcggacccggcaggggcttcggcaagaggcggcaccctaaaaaactgacc
cccttagcctacaagcagttcatccccaacgtagcagagaagacgctgggggccagcggc
aggtacgaggggaagatctccaggaactccgagcggtttaaggaactcacccccaactac
aaccccgacatcatatttaaggacgaggagaacaccggcgcggaccggctcatgactcag
aggtgcaaggacaagctgaacgccttggccatctcggtgatgaaccagtggccgggggtg
aagctgcgggtgacggagggctgggacgaggacggccaccactcggaggagtccctgcac
tacgagggccgcgccgtggacatcaccacctccgaccgcgaccgcagcaagtacggcatg
ctggcgcgcctggcggtggaggccggcttcgactgggtctactacgagtccaaggcgcac
atccactgctcggtgaaagcagagaactcggtggcggccaagtccggcggctgcttcccg
ggatgggccacggtgcacctggagcggggcggcaccaagccggtgcgggagctgcgtccc
ggggaccgcgtgctggcggccgacgagcagggccggctgctgtacagcgacttcctggcc
ttcctggaccgcgacgaccgcgcccggaaggttttctacgtgatcgagacgcgggagccg
cgggcgcgcctgctgctcaccgccgcgcacctgctcttcgtggcgccgccgcacaacggc
tcggccccggcggggcgccgcgcgctcttcgccagcagcgtgcgcccgggccagcgcgtg
tacgtggcgtccgggcgcggcgggcggcggcggctgcggccggccgcggtgcaccgcgtg
accgtgcgcgaggaggcggcgggcgcgtacgcgccgctcaccgcgcagggcaccatcctg
gtcaaccgggtgctggcctcgtgctacgccgtcatcgaggagcacggctgggcgcactgg
gccttcgcgcccttccgcctggcgcacgcgctgctggccgcgctggcgcccgcgcccgcg
cgcacggacggcgttggcgcggccccggccccggccccggccccgggcgtgcactggtac
tcgcagctgctctaccaaatcggcacctggctgctggacagcgagaccatgcacccgctg
ggcatggcggccccagccggctga

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