KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122105877
Entry
122105877         CDS       T07891                                 
Symbol
Kdm4a
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dsp03036]
    122105877 (Kdm4a)
Enzymes [BR:dsp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     122105877 (Kdm4a)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     122105877 (Kdm4a)
Chromosome and associated proteins [BR:dsp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122105877 (Kdm4a)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD Tudor_5 DUF7141 LBR_tudor DUF4537 PHDvar_NSD
Other DBs
NCBI-GeneID: 122105877
NCBI-ProteinID: XP_042533073
LinkDB
Position
Unknown
AA seq 1063 aa
MASESETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRTSYD
DIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERK
YWKNLTFNPPIYGADVNGTLYEKHVDEWNIGRLKTILDLVEKESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSSQSCEAFLRH
KMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG
KQAVLCSCRKDMVKISMDVFVRRFQPERYKLWKAGKDSTVIDHTLPTPEAAEFLKESELS
TRAVNEQCPEEDMEGIEDGEEGDLKRSLAKHRIGTKRHRVCLEIPQEVSQSELFPKEELS
SGQYEMTECQAALAPVRPTHSSVRQVEDSLPFPDYSDSTEVKFEELKNVKLEEEDEEEEQ
EAAALDLSVNPASIGGRLVFSSSKKKFSSSMGSSSSRDSASSDSETSDPLSCQAQGQTGV
FTVHSYAKGDGKVTMGEPCMKKKAGAPRSISEQELATVADRYMFSLEETKKSKGRRQPLS
KLPRHHPLVLQECVSDDETSEQLTPEEEADETEAWAKPLSQLWQNRPPNFEAEKEFNEFM
AQQAPHCAVCMIFQTYHQVEFGGLSQNCGNASTSAAQTQRTKPLIPEMCFTTTGCSTDIN
LSTPYLEEDGTSMLVSCKKCSVRVHASCYGVPPTKASEEWMCSRCSANALEEDCCLCSLR
GGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKKRRKRNA
GCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALQSITA
GQKVISKHKNGRFYQCEVVTLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLGPPAEGE
VVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRLSVA
SDMRFNEIFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME
NT seq 3192 nt   +upstreamnt  +downstreamnt
atggcttctgaatctgaaactctgaatcccagtgctaggataatgactttttatccaact
atggaagagttccggaactttagtcggtacattgcctatattgaatcacaaggagcacat
cgggctgggctggccaaggttgttcctcccaaagaatggaagccaagaacatcctatgat
gacattgatgacttggtcattcccgcacccatccagcagctggtgactggacagtctggg
ctctttacccagtataacatacagaagaaagccatgactgttcgggagttcaggaagatt
gcaaacagtgataagtattgtaccccacgctacagtgaatttgaagagcttgagcgaaag
tactggaaaaacctcacattcaatcctcccatttatggtgcggatgtcaatggtactctc
tatgaaaagcatgtggatgagtggaatattggccggctgaagacaatcctggacttggtg
gaaaaggagagtggcatcactattgaaggtgtgaacaccccatacctgtactttggcatg
tggaagacatcttttgcctggcatacagaagacatggacctctacagcatcaactatctg
cactttggggagcccaagtcctggtactctgttccacctgagcatggaaaacggttggag
cgccttgccaaaggctttttcccaggaagttctcaaagctgtgaggctttcctccgccat
aagatgaccctgatttcccctctgatgctgaagaaatacggcattccctttgacaaggtt
actcaagaagctggagaatttatgatcacttttccttatggttaccatgctgggttcaac
catggcttcaattgtgccgagtctaccaattttgctacccgtcggtggattgagtatggg
aagcaggctgtgctgtgctcctgcaggaaggatatggtgaagatctccatggatgtgttt
gtgaggcggttccagccagaaaggtacaaactttggaaagctgggaaggacagcacagtt
attgatcatactctgcccacgccagaagcagccgaatttctgaaggagagtgaactgtcc
acaagagctgtgaatgagcagtgcccagaggaggacatggaggggatcgaggatggagag
gagggggacctgaagagaagcctggccaagcatcgtattgggacaaagagacaccgggtt
tgtctcgaaataccacaggaggtgagtcagagcgaactcttccccaaggaggagttgagt
tctggacagtatgagatgacagagtgccaggctgccctcgccccagtgaggcccacccac
agctctgtgcgacaagtggaagacagcttgcccttcccagattactctgactcgactgaa
gtcaaatttgaagagctcaaaaacgtcaaactagaagaggaagatgaggaagaagaacaa
gaggcagctgccctggatctttctgtgaatcctgcttccataggaggacgtcttgtcttc
tccagttccaaaaagaaattttcttctagcatgggatccagttcttctcgagattctgcc
tcttctgattcggaaaccagcgatcctctttcctgccaagctcaggggcaaacaggagtt
ttcaccgtgcacagctacgccaaaggggatggcaaagtgactatgggagagccatgcatg
aagaagaaagctggtgcccccagaagtatcagtgaacaggagctggccacggttgctgat
cggtacatgttttctctggaggagactaagaagtccaagggtcgccgccagcccttaagc
aagctcccacgccatcacccacttgtgttgcaggagtgtgtcagtgatgatgagacctct
gaacagctgacccctgaagaggaagctgatgagacagaggcctgggccaagcccctaagt
cagctgtggcagaaccgacctccaaactttgaagctgagaaggaattcaacgagttcatg
gcccagcaggctccacactgtgccgtctgcatgatcttccaaacttaccatcaggtcgag
tttggaggcctgagccagaactgtggaaatgcttccacatccgctgcccaaacacaaagg
accaagccattgattccagaaatgtgcttcaccacaaccggctgcagcacagacatcaac
ctttctactccttacctggaggaagatggcaccagcatgcttgtctcctgcaagaagtgc
agtgtccgggtccacgccagttgctatggggttccccctacaaaggcttctgaagagtgg
atgtgttcccggtgttcagccaatgccctggaagaagactgctgtttatgctcattacga
ggaggggccctgcagagagcaaatgatgacaggtgggtccacgtttcatgtgccgtggca
attctggaagcaaggtttgtcaacattgctgaaagaagtcctgtggatgtgagcaaaatc
cccctacctcgcttcaaactgaaatgtgtcttctgtaagaagcgaaggaaaagaaatgct
ggctgctgtgtacaatgctctcatggccgctgtccaactgctttccacgtgagctgtgct
caggcggctggtgtgatgatgcagcctgacgactggccttttgtggtcttcattacctgc
tttcggcacaagattcccaatttggagcgtgccaagggggccttgcagagcatcactgcg
ggccagaaggtcatcagcaagcataagaatgggcgcttctaccagtgtgaagtggtcaca
ctcaccaccgagaccttctatgaagtcaactttgatgatggctccttcagcgacaatctt
tatcctgaggacatagtgagccaggactgtctccagttgggtcctcctgctgaaggggaa
gtggtccaagtgagatggacagatggccaagtctatggagccaagtttgtggcgtcccat
cctatccagatgtatcaggtggaatttgaggatggctcacagcttgtggtaaaaagagat
gatgtatacacactggatgaagaactccccaagagagtgaagtccagactgtcagtagcc
tcagacatgcgcttcaatgagattttcacagagaaagaggttaaacaagaaaagaaacgg
cagcgtgtcatcaactcaagataccgggaagattatattgagcctgcactgtaccgggct
atcatggagtag

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